CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67438481|67438832
Strand -
CircType exon
Host Gene ENSG00000172725.12;
Algorism CIRI2;
Sequence CTCCTCCAGCTTCCCAGCCTCCCCGGCTCTGGCCAGGCTGCCGCTGGGGGTGGCATCAGCAGCAGTGGTGGTGGAGGCGGGGGCCCCTAGGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTGCTGGGCACGTAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67438481|67438832 hsa-miR-492 0 0 1
chr11:67438481|67438832 hsa-miR-503-5p 0 0 1
chr11:67438481|67438832 hsa-miR-503-3p 0 0 1
chr11:67438481|67438832 hsa-miR-632 0 0 1
chr11:67438481|67438832 hsa-miR-765 0 0 1
chr11:67438481|67438832 hsa-miR-1231 0 0 1
chr11:67438481|67438832 hsa-miR-1281 0 0 1
chr11:67438481|67438832 hsa-miR-296-5p 0 0 1
chr11:67438481|67438832 hsa-miR-532-3p 0 0 1
chr11:67438481|67438832 hsa-miR-485-5p 0 0 1
chr11:67438481|67438832 hsa-miR-361-3p 0 0 1
chr11:67438481|67438832 hsa-miR-1224-3p 0 0 1
chr11:67438481|67438832 hsa-miR-220b 0 0 1
chr11:67438481|67438832 hsa-miR-1260 0 0 1
chr11:67438481|67438832 hsa-miR-1280 0 0 1
chr11:67438481|67438832 hsa-miR-1469 1 0 0
chr11:67438481|67438832 hsa-miR-1913 1 0 0
chr11:67438481|67438832 hsa-miR-4634 1 0 0
chr11:67438481|67438832 hsa-miR-4767 1 0 0
chr11:67438481|67438832 hsa-miR-4665-3p 1 0 0
chr11:67438481|67438832 hsa-miR-6894-5p 1 0 0
chr11:67438481|67438832 hsa-miR-210-5p 1 0 0
chr11:67438481|67438832 hsa-miR-6776-3p 1 0 0
chr11:67438481|67438832 hsa-miR-6754-5p 1 0 0
chr11:67438481|67438832 hsa-miR-328-5p 1 0 0
chr11:67438481|67438832 hsa-miR-6846-5p 1 0 0
chr11:67438481|67438832 hsa-miR-6848-5p 1 0 0
chr11:67438481|67438832 hsa-miR-939-5p 1 0 0
chr11:67438481|67438832 hsa-miR-3085-5p 1 0 0
chr11:67438481|67438832 hsa-miR-10396a-3p 1 0 0
chr11:67438481|67438832 hsa-miR-10396b-3p 1 0 0
chr11:67438481|67438832 hsa-miR-6775-3p 1 0 0
chr11:67438481|67438832 hsa-miR-10392-3p 1 0 0
chr11:67438481|67438832 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:67438481|67438832
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MARLPLGVASAAVVVEAGAPRWEEPGAMAGRLSDNTLRRLIFRSRCLLGT
Nucleotide Sequence CTGGCCAGGCTGCCGCTGGGGGTGGCATCAGCAGCAGTGGTGGTGGAGGCGGGGGCCCCTAGGTGGGAGGAGCCCGGGGCCATGGCGGGCCGGCTGTCAGACAACACGTTGCGCCGGCTGATCTTCAGGTCCCGCTGCTTGCTGGGCACGTAG

CircID chr11:67438481|67438832
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MKISRRNVLSDSRPAMAPGSSHLGAPASTTTAADATPSGSLARAGEAGKLEE
Nucleotide Sequence CTGAAGATCAGCCGGCGCAACGTGTTGTCTGACAGCCGGCCCGCCATGGCCCCGGGCTCCTCCCACCTAGGGGCCCCCGCCTCCACCACCACTGCTGCTGATGCCACCCCCAGCGGCAGCCTGGCCAGAGCCGGGGAGGCTGGGAAGCTGGAGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites