CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67441438|67441833
Strand +
CircType exon
Host Gene ENSG00000172725.12;
Algorism CIRI2;
Sequence CTCCCCGCTGACAGAGCCGGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAACGTGCTGCTCAGTGCAGGTCTGCACCGCCCCCCGTTTTGTGCTCCCCCCCCCCACGGACCCCTCCATACATCCCAGCAGCCCCTCCAGGGCCCACATGACAAATGGGAAAGCTGAGGCCCTCAGAGTTGGAGAGACCCGTCTGTCCCAGGGTGGTGGGCAGAGTGGGCCTCAGCCTGGTGAGCTAATGGCCTCCTGCCACCCACCCGGCCCGAGCTGACAACCCTCACCTGCCAGGCTGCGACAACGTGGTACTCATCTGGAATGTGGGCACAGCGGAGGAGCTGTACCGCCTGGACAGCCTGCACCCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67441438|67441833 hsa-miR-15a-5p 0 0 1
chr11:67441438|67441833 hsa-miR-15a-3p 0 0 1
chr11:67441438|67441833 hsa-miR-198 0 0 1
chr11:67441438|67441833 hsa-miR-15b-5p 0 0 1
chr11:67441438|67441833 hsa-miR-15b-3p 0 0 1
chr11:67441438|67441833 hsa-miR-195-5p 0 0 1
chr11:67441438|67441833 hsa-miR-195-3p 0 0 1
chr11:67441438|67441833 hsa-miR-424-5p 0 0 1
chr11:67441438|67441833 hsa-miR-424-3p 0 0 1
chr11:67441438|67441833 hsa-miR-497-5p 0 0 1
chr11:67441438|67441833 hsa-miR-497-3p 0 0 1
chr11:67441438|67441833 hsa-miR-608 1 0 1
chr11:67441438|67441833 hsa-miR-760 1 1 1
chr11:67441438|67441833 hsa-miR-939-5p 0 0 1
chr11:67441438|67441833 hsa-miR-939-3p 0 0 1
chr11:67441438|67441833 hsa-miR-1226-5p 0 0 1
chr11:67441438|67441833 hsa-miR-1226-3p 0 0 1
chr11:67441438|67441833 hsa-miR-1291 0 0 1
chr11:67441438|67441833 hsa-miR-1293 0 0 1
chr11:67441438|67441833 hsa-miR-1322 0 0 1
chr11:67441438|67441833 hsa-miR-125a-3p 1 1 1
chr11:67441438|67441833 hsa-miR-296-5p 0 0 1
chr11:67441438|67441833 hsa-miR-770-5p 0 1 1
chr11:67441438|67441833 hsa-miR-615-5p 1 0 1
chr11:67441438|67441833 hsa-miR-296-3p 0 0 1
chr11:67441438|67441833 hsa-miR-299-3p 0 0 1
chr11:67441438|67441833 hsa-miR-423-5p 0 0 1
chr11:67441438|67441833 hsa-miR-525-5p 0 0 1
chr11:67441438|67441833 hsa-miR-483-5p 0 0 1
chr11:67441438|67441833 hsa-miR-1207-5p 1 0 1
chr11:67441438|67441833 hsa-miR-324-3p 0 0 1
chr11:67441438|67441833 hsa-miR-342-5p 0 1 1
chr11:67441438|67441833 hsa-miR-520a-5p 0 0 1
chr11:67441438|67441833 hsa-miR-1302 0 0 1
chr11:67441438|67441833 hsa-miR-515-5p 0 0 1
chr11:67441438|67441833 hsa-miR-220b 0 0 1
chr11:67441438|67441833 hsa-miR-16 0 0 1
chr11:67441438|67441833 hsa-miR-453 0 0 1
chr11:67441438|67441833 hsa-miR-923 0 0 1
chr11:67441438|67441833 hsa-miR-637 1 0 0
chr11:67441438|67441833 hsa-miR-638 1 0 0
chr11:67441438|67441833 hsa-miR-663a 1 0 0
chr11:67441438|67441833 hsa-miR-658 1 0 0
chr11:67441438|67441833 hsa-miR-762 1 0 0
chr11:67441438|67441833 hsa-miR-2861 1 0 0
chr11:67441438|67441833 hsa-miR-3171 0 1 0
chr11:67441438|67441833 hsa-miR-3181 1 1 0
chr11:67441438|67441833 hsa-miR-4296 0 1 0
chr11:67441438|67441833 hsa-miR-4298 0 1 0
chr11:67441438|67441833 hsa-miR-4322 0 1 0
chr11:67441438|67441833 hsa-miR-4268 0 1 0
chr11:67441438|67441833 hsa-miR-4292 0 1 0
chr11:67441438|67441833 hsa-miR-23c 0 1 0
chr11:67441438|67441833 hsa-miR-3621 1 0 0
chr11:67441438|67441833 hsa-miR-3665 1 1 0
chr11:67441438|67441833 hsa-miR-3911 1 0 0
chr11:67441438|67441833 hsa-miR-3937 1 1 0
chr11:67441438|67441833 hsa-miR-1268b 1 0 0
chr11:67441438|67441833 hsa-miR-4440 1 0 0
chr11:67441438|67441833 hsa-miR-4466 1 0 0
chr11:67441438|67441833 hsa-miR-4479 1 0 0
chr11:67441438|67441833 hsa-miR-4488 1 0 0
chr11:67441438|67441833 hsa-miR-4512 0 1 0
chr11:67441438|67441833 hsa-miR-4651 1 0 0
chr11:67441438|67441833 hsa-miR-4654 1 0 0
chr11:67441438|67441833 hsa-miR-4656 1 0 0
chr11:67441438|67441833 hsa-miR-4673 1 0 0
chr11:67441438|67441833 hsa-miR-4706 1 0 0
chr11:67441438|67441833 hsa-miR-4736 1 0 0
chr11:67441438|67441833 hsa-miR-4741 1 1 0
chr11:67441438|67441833 hsa-miR-4754 0 1 0
chr11:67441438|67441833 hsa-miR-5194 1 1 0
chr11:67441438|67441833 hsa-miR-5683 0 1 0
chr11:67441438|67441833 hsa-miR-5698 1 1 0
chr11:67441438|67441833 hsa-miR-5705 0 1 0
chr11:67441438|67441833 hsa-miR-6085 1 1 0
chr11:67441438|67441833 hsa-miR-6090 1 0 0
chr11:67441438|67441833 hsa-miR-7150 0 1 0
chr11:67441438|67441833 hsa-miR-8073 0 1 0
chr11:67441438|67441833 hsa-miR-1843 1 1 0
chr11:67441438|67441833 hsa-miR-10226 1 0 0
chr11:67441438|67441833 hsa-miR-12119 0 1 0
chr11:67441438|67441833 hsa-miR-6861-5p 1 0 0
chr11:67441438|67441833 hsa-miR-4687-3p 1 0 0
chr11:67441438|67441833 hsa-miR-486-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6799-5p 1 0 0
chr11:67441438|67441833 hsa-miR-3692-5p 0 1 0
chr11:67441438|67441833 hsa-miR-3663-3p 1 0 0
chr11:67441438|67441833 hsa-miR-7114-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6515-5p 0 1 0
chr11:67441438|67441833 hsa-miR-7847-3p 1 0 0
chr11:67441438|67441833 hsa-miR-4695-5p 0 1 0
chr11:67441438|67441833 hsa-miR-4722-5p 0 1 0
chr11:67441438|67441833 hsa-miR-7160-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6741-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6787-3p 1 0 0
chr11:67441438|67441833 hsa-miR-6742-5p 1 0 0
chr11:67441438|67441833 hsa-miR-3180-3p 1 0 0
chr11:67441438|67441833 hsa-miR-6748-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6772-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6796-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6829-5p 1 1 0
chr11:67441438|67441833 hsa-miR-23a-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6782-5p 1 0 0
chr11:67441438|67441833 hsa-miR-4793-3p 0 1 0
chr11:67441438|67441833 hsa-miR-7855-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6786-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6772-3p 0 1 0
chr11:67441438|67441833 hsa-miR-7109-5p 1 1 0
chr11:67441438|67441833 hsa-miR-3944-3p 1 0 0
chr11:67441438|67441833 hsa-miR-1228-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6749-5p 1 0 0
chr11:67441438|67441833 hsa-miR-4743-5p 1 1 0
chr11:67441438|67441833 hsa-miR-149-3p 1 0 0
chr11:67441438|67441833 hsa-miR-6736-3p 0 1 0
chr11:67441438|67441833 hsa-miR-6824-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6800-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6776-3p 0 1 0
chr11:67441438|67441833 hsa-miR-6781-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6877-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6889-3p 0 1 0
chr11:67441438|67441833 hsa-miR-1911-3p 0 1 0
chr11:67441438|67441833 hsa-miR-3180-5p 0 1 0
chr11:67441438|67441833 hsa-miR-4758-3p 0 1 0
chr11:67441438|67441833 hsa-miR-6887-3p 0 1 0
chr11:67441438|67441833 hsa-miR-4746-3p 1 1 0
chr11:67441438|67441833 hsa-miR-6895-3p 0 1 0
chr11:67441438|67441833 hsa-miR-4749-3p 1 1 0
chr11:67441438|67441833 hsa-miR-4649-3p 0 1 0
chr11:67441438|67441833 hsa-miR-6777-3p 0 1 0
chr11:67441438|67441833 hsa-miR-624-5p 0 1 0
chr11:67441438|67441833 hsa-miR-1911-5p 0 1 0
chr11:67441438|67441833 hsa-miR-4714-5p 0 1 0
chr11:67441438|67441833 hsa-miR-16-5p 0 1 0
chr11:67441438|67441833 hsa-miR-1233-5p 1 0 0
chr11:67441438|67441833 hsa-miR-4763-3p 1 0 0
chr11:67441438|67441833 hsa-miR-6769b-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6778-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6787-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6812-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6816-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6870-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6893-5p 1 0 0
chr11:67441438|67441833 hsa-miR-1343-5p 1 0 0
chr11:67441438|67441833 hsa-miR-3180 1 0 0
chr11:67441438|67441833 hsa-miR-6737-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6752-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6756-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6769a-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6803-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6813-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6819-5p 1 1 0
chr11:67441438|67441833 hsa-miR-7110-5p 1 0 0
chr11:67441438|67441833 hsa-miR-1249-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6722-3p 1 0 0
chr11:67441438|67441833 hsa-miR-6751-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6779-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6797-5p 1 0 0
chr11:67441438|67441833 hsa-miR-7111-5p 1 1 0
chr11:67441438|67441833 hsa-miR-4728-5p 1 0 0
chr11:67441438|67441833 hsa-miR-1237-5p 1 1 0
chr11:67441438|67441833 hsa-miR-328-5p 1 1 0
chr11:67441438|67441833 hsa-miR-4632-5p 1 0 0
chr11:67441438|67441833 hsa-miR-4649-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6729-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6738-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6795-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6846-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6848-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6858-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6887-5p 1 1 0
chr11:67441438|67441833 hsa-miR-4723-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6885-5p 1 1 0
chr11:67441438|67441833 hsa-miR-3085-5p 0 1 0
chr11:67441438|67441833 hsa-miR-6773-5p 0 1 0
chr11:67441438|67441833 hsa-miR-1914-3p 1 1 0
chr11:67441438|67441833 hsa-miR-4665-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6891-5p 1 0 0
chr11:67441438|67441833 hsa-miR-6766-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6724-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6791-5p 1 1 0
chr11:67441438|67441833 hsa-miR-323b-5p 0 1 0
chr11:67441438|67441833 hsa-miR-23b-3p 0 1 0
chr11:67441438|67441833 hsa-miR-6811-5p 1 1 0
chr11:67441438|67441833 hsa-miR-6506-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:67441438|67441833
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MAPHGPKRAAQCRSAPPPVLCSPPPRTPPYIPAAPPGPT
Nucleotide Sequence CTGGCACCCCACGGCCCGAAACGTGCTGCTCAGTGCAGGTCTGCACCGCCCCCCGTTTTGTGCTCCCCCCCCCCACGGACCCCTCCATACATCCCAGCAGCCCCTCCAGGGCCCACATGA
CircID chr11:67441438|67441833
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MGKLRPSELERPVCPRVVGRVGLSLVS
Nucleotide Sequence ATGGGAAAGCTGAGGCCCTCAGAGTTGGAGAGACCCGTCTGTCCCAGGGTGGTGGGCAGAGTGGGCCTCAGCCTGGTGAGCTAA
CircID chr11:67441438|67441833
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MPGCDNVVLIWNVGTAEELYRLDSLHPD
Nucleotide Sequence CTGCCAGGCTGCGACAACGTGGTACTCATCTGGAATGTGGGCACAGCGGAGGAGCTGTACCGCCTGGACAGCCTGCACCCTGAC
CircID chr11:67441438|67441833
ORF Type ORF4
Protein Length 63
Nucleotide Length 192
Protein Sequence MTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGLHRPPFCAPPPHGPLHTSQQPLQGPHDKWES
Nucleotide Sequence CTGACAGAGCCGGTGGTGGTACTGGAGGGGCACACCAAGCGAGTGGGCATCATCGCCTGGCACCCCACGGCCCGAAACGTGCTGCTCAGTGCAGGTCTGCACCGCCCCCCGTTTTGTGCTCCCCCCCCCCACGGACCCCTCCATACATCCCAGCAGCCCCTCCAGGGCCCACATGACAAATGGGAAAGCTGA
CircID chr11:67441438|67441833
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MPPTRPELTTLTCQAATTWYSSGMWAQRRSCTAWTACTL
Nucleotide Sequence CTGCCACCCACCCGGCCCGAGCTGACAACCCTCACCTGCCAGGCTGCGACAACGTGGTACTCATCTGGAATGTGGGCACAGCGGAGGAGCTGTACCGCCTGGACAGCCTGCACCCTG
CircID chr11:67441438|67441833
ORF Type ORF6
Protein Length 40
Nucleotide Length 123
Protein Sequence MTNGKAEALRVGETRLSQGGGQSGPQPGELMASCHPPGPS
Nucleotide Sequence ATGACAAATGGGAAAGCTGAGGCCCTCAGAGTTGGAGAGACCCGTCTGTCCCAGGGTGGTGGGCAGAGTGGGCCTCAGCCTGGTGAGCTAATGGCCTCCTGCCACCCACCCGGCCCGAGCTGA
CircID chr11:67441438|67441833
ORF Type ORF7
Protein Length 62
Nucleotide Length 186
Protein Sequence MSCGPWRGCWDVWRGPWGGGAQNGGRCRPALSSTFRAVGCQAMMPTRLVCPSSTTTGSVSGE
Nucleotide Sequence TTGTCATGTGGGCCCTGGAGGGGCTGCTGGGATGTATGGAGGGGTCCGTGGGGGGGGGGAGCACAAAACGGGGGGCGGTGCAGACCTGCACTGAGCAGCACGTTTCGGGCCGTGGGGTGCCAGGCGATGATGCCCACTCGCTTGGTGTGCCCCTCCAGTACCACCACCGGCTCTGTCAGCGGGGAG
CircID chr11:67441438|67441833
ORF Type ORF8
Protein Length 54
Nucleotide Length 165
Protein Sequence MRPTLPTTLGQTGLSNSEGLSFPICHVGPGGAAGMYGGVRGGGEHKTGGGADLH
Nucleotide Sequence CTGAGGCCCACTCTGCCCACCACCCTGGGACAGACGGGTCTCTCCAACTCTGAGGGCCTCAGCTTTCCCATTTGTCATGTGGGCCCTGGAGGGGCTGCTGGGATGTATGGAGGGGTCCGTGGGGGGGGGGAGCACAAAACGGGGGGCGGTGCAGACCTGCACTGA
CircID chr11:67441438|67441833
ORF Type ORF9
Protein Length 69
Nucleotide Length 207
Protein Sequence MRASAFPFVMWALEGLLGCMEGSVGGGSTKRGAVQTCTEQHVSGRGVPGDDAHSLGVPLQYHHRLCQRG
Nucleotide Sequence CTGAGGGCCTCAGCTTTCCCATTTGTCATGTGGGCCCTGGAGGGGCTGCTGGGATGTATGGAGGGGTCCGTGGGGGGGGGGAGCACAAAACGGGGGGCGGTGCAGACCTGCACTGAGCAGCACGTTTCGGGCCGTGGGGTGCCAGGCGATGATGCCCACTCGCTTGGTGTGCCCCTCCAGTACCACCACCGGCTCTGTCAGCGGGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab