CircRNA Information

General Information
circRNA Basic Information
CircID chr11:67506743|67506984
Strand -
CircType exon
Host Gene ENSG00000167797.6;
Algorism CIRI2;
Sequence CTCGCTGCTAACTCTTGTTGTGGGGGGGTGTCCTTAGTGCTGCCACCTGGAGGGCCACTCCTTGGTTCCTGGAGGGGACCCACCAAGGGACACAGGACAGGAAGCCCAGGATGGTTAGTGCAACTCGGGATGAAGGCCAGGGAGAAGCGGGTGCTCTGCAGTGGCCGGATAGGTCCAGACGCTGAGGCCGAGGCGCTTCCTGTTACGTGCGGGCGTTCCGCTCTGTCTCTGCCAGGCACTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:67506743|67506984 hsa-miR-15a-5p 0 0 1
chr11:67506743|67506984 hsa-miR-15a-3p 0 0 1
chr11:67506743|67506984 hsa-miR-205-5p 0 0 1
chr11:67506743|67506984 hsa-miR-205-3p 0 0 1
chr11:67506743|67506984 hsa-miR-15b-5p 0 0 1
chr11:67506743|67506984 hsa-miR-15b-3p 0 0 1
chr11:67506743|67506984 hsa-miR-195-5p 0 0 1
chr11:67506743|67506984 hsa-miR-195-3p 0 0 1
chr11:67506743|67506984 hsa-miR-328-5p 0 0 1
chr11:67506743|67506984 hsa-miR-328-3p 0 0 1
chr11:67506743|67506984 hsa-miR-422a 0 0 1
chr11:67506743|67506984 hsa-miR-424-5p 0 0 1
chr11:67506743|67506984 hsa-miR-424-3p 0 0 1
chr11:67506743|67506984 hsa-miR-492 0 0 1
chr11:67506743|67506984 hsa-miR-497-5p 0 0 1
chr11:67506743|67506984 hsa-miR-497-3p 0 0 1
chr11:67506743|67506984 hsa-miR-519e-5p 0 0 1
chr11:67506743|67506984 hsa-miR-519e-3p 0 0 1
chr11:67506743|67506984 hsa-miR-503-5p 0 0 1
chr11:67506743|67506984 hsa-miR-503-3p 0 0 1
chr11:67506743|67506984 hsa-miR-623 0 0 1
chr11:67506743|67506984 hsa-miR-646 0 0 1
chr11:67506743|67506984 hsa-miR-661 0 0 1
chr11:67506743|67506984 hsa-miR-541-5p 0 0 1
chr11:67506743|67506984 hsa-miR-541-3p 0 0 1
chr11:67506743|67506984 hsa-miR-665 0 0 1
chr11:67506743|67506984 hsa-miR-873-5p 0 0 1
chr11:67506743|67506984 hsa-miR-873-3p 0 0 1
chr11:67506743|67506984 hsa-miR-1234-3p 0 0 1
chr11:67506743|67506984 hsa-miR-663b 0 0 1
chr11:67506743|67506984 hsa-miR-1291 0 0 1
chr11:67506743|67506984 hsa-miR-1197 0 0 1
chr11:67506743|67506984 hsa-miR-1234 0 0 1
chr11:67506743|67506984 hsa-miR-885-3p 0 0 1
chr11:67506743|67506984 hsa-miR-654-5p 0 0 1
chr11:67506743|67506984 hsa-miR-515-3p 0 0 1
chr11:67506743|67506984 hsa-miR-509-3-5p 0 0 1
chr11:67506743|67506984 hsa-miR-509-5p 0 0 1
chr11:67506743|67506984 hsa-miR-516a-3p 0 0 1
chr11:67506743|67506984 hsa-miR-550 0 0 1
chr11:67506743|67506984 hsa-miR-16 0 0 1
chr11:67506743|67506984 hsa-miR-378 0 0 1
chr11:67506743|67506984 hsa-miR-1254 0 0 1
chr11:67506743|67506984 hsa-miR-194 0 0 1
chr11:67506743|67506984 hsa-miR-3907 1 0 0
chr11:67506743|67506984 hsa-miR-8073 1 0 0
chr11:67506743|67506984 hsa-miR-8078 1 0 0
chr11:67506743|67506984 hsa-miR-4665-3p 1 0 0
chr11:67506743|67506984 hsa-miR-874-3p 1 0 0
chr11:67506743|67506984 hsa-miR-877-3p 1 0 0
chr11:67506743|67506984 hsa-miR-6850-5p 1 0 0
chr11:67506743|67506984 hsa-miR-939-3p 1 0 0
chr11:67506743|67506984 hsa-miR-4783-5p 1 0 0
chr11:67506743|67506984 hsa-miR-6742-3p 1 0 0
chr11:67506743|67506984 hsa-miR-1307-3p 1 0 0
chr11:67506743|67506984 hsa-miR-4638-5p 1 0 0
chr11:67506743|67506984 hsa-miR-3619-3p 1 0 0
chr11:67506743|67506984 hsa-miR-6804-3p 1 0 0
chr11:67506743|67506984 hsa-miR-339-3p 1 0 0
chr11:67506743|67506984 hsa-miR-6871-3p 1 0 0
chr11:67506743|67506984 hsa-miR-668-5p 1 0 0
chr11:67506743|67506984 hsa-miR-6851-3p 1 0 0
chr11:67506743|67506984 hsa-miR-6865-5p 1 0 0
chr11:67506743|67506984 hsa-miR-10392-5p 1 0 0
chr11:67506743|67506984 hsa-miR-6799-3p 1 0 0
chr11:67506743|67506984 hsa-miR-4722-3p 1 0 0
chr11:67506743|67506984 hsa-miR-4723-3p 1 0 0
chr11:67506743|67506984 hsa-miR-6783-3p 1 0 0
chr11:67506743|67506984 hsa-miR-33b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:67506743|67506984
ORF Type ORF1
Protein Length 67
Nucleotide Length 201
Protein Sequence MPPGGPLLGSWRGPTKGHRTGSPGWLVQLGMKAREKRVLCSGRIGPDAEAEALPVTCGRSALSLPGT
Nucleotide Sequence CTGCCACCTGGAGGGCCACTCCTTGGTTCCTGGAGGGGACCCACCAAGGGACACAGGACAGGAAGCCCAGGATGGTTAGTGCAACTCGGGATGAAGGCCAGGGAGAAGCGGGTGCTCTGCAGTGGCCGGATAGGTCCAGACGCTGAGGCCGAGGCGCTTCCTGTTACGTGCGGGCGTTCCGCTCTGTCTCTGCCAGGCACT

CircID chr11:67506743|67506984
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MLWGGVLSAATWRATPWFLEGTHQGTQDRKPRMVSATRDEGQGEAGALQWPDRSRR
Nucleotide Sequence TTGTTGTGGGGGGGTGTCCTTAGTGCTGCCACCTGGAGGGCCACTCCTTGGTTCCTGGAGGGGACCCACCAAGGGACACAGGACAGGAAGCCCAGGATGGTTAGTGCAACTCGGGATGAAGGCCAGGGAGAAGCGGGTGCTCTGCAGTGGCCGGATAGGTCCAGACGCTGA

CircID chr11:67506743|67506984
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MQSTRFSLAFIPSCTNHPGLPVLCPLVGPLQEPRSGPPGGSTKDTPPQQELAA
Nucleotide Sequence CTGCAGAGCACCCGCTTCTCCCTGGCCTTCATCCCGAGTTGCACTAACCATCCTGGGCTTCCTGTCCTGTGTCCCTTGGTGGGTCCCCTCCAGGAACCAAGGAGTGGCCCTCCAGGTGGCAGCACTAAGGACACCCCCCCACAACAAGAGTTAGCAGCG

CircID chr11:67506743|67506984
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MDLSGHCRAPASPWPSSRVALTILGFLSCVPWWVPSRNQGVALQVAALRTPPHNKS
Nucleotide Sequence CTGGACCTATCCGGCCACTGCAGAGCACCCGCTTCTCCCTGGCCTTCATCCCGAGTTGCACTAACCATCCTGGGCTTCCTGTCCTGTGTCCCTTGGTGGGTCCCCTCCAGGAACCAAGGAGTGGCCCTCCAGGTGGCAGCACTAAGGACACCCCCCCACAACAAGAGTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites