CircRNA Information

General Information
circRNA Basic Information
CircID chr11:68049989|68050186
Strand -
CircType exon
Host Gene ENSG00000110719.8;
Algorism CIRI2;
Sequence CTGCCTGACGCATCTGTGAATGGCTGGAGCTCCGATGAGGAAAAGGCAGGGGGCCTGGATGATGAAGAGGAGGCCGAGGTGGGTGCAGTGCCTTCCTGGGGGTGGGACGGCTGAGGCCCTGCCGGCCCTCACTGCACCCGCCCCGCAGCTCGTCCCCTCCGAGGTGCTCATGCACCAGGCCATCCACACCATCGAGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:68049989|68050186 hsa-miR-27a-5p 0 0 1
chr11:68049989|68050186 hsa-miR-27a-3p 0 0 1
chr11:68049989|68050186 hsa-miR-27b-5p 0 0 1
chr11:68049989|68050186 hsa-miR-27b-3p 0 0 1
chr11:68049989|68050186 hsa-miR-506-5p 0 0 1
chr11:68049989|68050186 hsa-miR-506-3p 0 0 1
chr11:68049989|68050186 hsa-miR-558 0 0 1
chr11:68049989|68050186 hsa-miR-766-5p 0 0 1
chr11:68049989|68050186 hsa-miR-766-3p 0 0 1
chr11:68049989|68050186 hsa-miR-744-5p 0 0 1
chr11:68049989|68050186 hsa-miR-744-3p 0 0 1
chr11:68049989|68050186 hsa-miR-1234-3p 0 0 1
chr11:68049989|68050186 hsa-miR-1238-5p 0 0 1
chr11:68049989|68050186 hsa-miR-1238-3p 0 0 1
chr11:68049989|68050186 hsa-miR-1234 0 0 1
chr11:68049989|68050186 hsa-miR-361-3p 0 0 1
chr11:68049989|68050186 hsa-miR-1224-3p 1 1 1
chr11:68049989|68050186 hsa-miR-513a-5p 0 0 1
chr11:68049989|68050186 hsa-miR-1207-5p 0 0 1
chr11:68049989|68050186 hsa-miR-1260 0 0 1
chr11:68049989|68050186 hsa-miR-1280 0 0 1
chr11:68049989|68050186 hsa-miR-124 0 0 1
chr11:68049989|68050186 hsa-miR-886-3p 0 0 1
chr11:68049989|68050186 hsa-miR-640 1 0 0
chr11:68049989|68050186 hsa-miR-663a 1 0 0
chr11:68049989|68050186 hsa-miR-762 1 0 0
chr11:68049989|68050186 hsa-miR-940 1 0 0
chr11:68049989|68050186 hsa-miR-1260a 0 1 0
chr11:68049989|68050186 hsa-miR-548q 0 1 0
chr11:68049989|68050186 hsa-miR-3139 1 0 0
chr11:68049989|68050186 hsa-miR-3141 1 0 0
chr11:68049989|68050186 hsa-miR-3196 1 0 0
chr11:68049989|68050186 hsa-miR-3621 1 0 0
chr11:68049989|68050186 hsa-miR-3911 1 1 0
chr11:68049989|68050186 hsa-miR-3918 0 1 0
chr11:68049989|68050186 hsa-miR-4466 1 0 0
chr11:68049989|68050186 hsa-miR-4488 0 1 0
chr11:68049989|68050186 hsa-miR-4498 1 1 0
chr11:68049989|68050186 hsa-miR-4512 1 1 0
chr11:68049989|68050186 hsa-miR-4651 1 1 0
chr11:68049989|68050186 hsa-miR-4734 1 1 0
chr11:68049989|68050186 hsa-miR-5193 1 1 0
chr11:68049989|68050186 hsa-miR-6072 0 1 0
chr11:68049989|68050186 hsa-miR-7703 1 0 0
chr11:68049989|68050186 hsa-miR-8056 1 0 0
chr11:68049989|68050186 hsa-miR-12116 1 0 0
chr11:68049989|68050186 hsa-miR-432-3p 0 1 0
chr11:68049989|68050186 hsa-miR-6747-3p 0 1 0
chr11:68049989|68050186 hsa-miR-4665-3p 1 0 0
chr11:68049989|68050186 hsa-miR-6720-5p 0 1 0
chr11:68049989|68050186 hsa-miR-6881-3p 0 1 0
chr11:68049989|68050186 hsa-miR-3663-3p 0 1 0
chr11:68049989|68050186 hsa-miR-593-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6840-5p 0 1 0
chr11:68049989|68050186 hsa-miR-6741-5p 1 1 0
chr11:68049989|68050186 hsa-miR-8069 1 0 0
chr11:68049989|68050186 hsa-miR-6776-5p 1 0 0
chr11:68049989|68050186 hsa-miR-423-3p 1 0 0
chr11:68049989|68050186 hsa-miR-3180-3p 1 0 0
chr11:68049989|68050186 hsa-miR-877-3p 0 1 0
chr11:68049989|68050186 hsa-miR-6805-5p 0 1 0
chr11:68049989|68050186 hsa-miR-6882-3p 1 0 0
chr11:68049989|68050186 hsa-miR-6786-5p 1 0 0
chr11:68049989|68050186 hsa-miR-939-3p 1 0 0
chr11:68049989|68050186 hsa-miR-1226-5p 0 1 0
chr11:68049989|68050186 hsa-miR-1908-3p 1 0 0
chr11:68049989|68050186 hsa-miR-5001-3p 1 0 0
chr11:68049989|68050186 hsa-miR-92b-5p 0 1 0
chr11:68049989|68050186 hsa-miR-6878-3p 1 1 0
chr11:68049989|68050186 hsa-miR-4446-3p 0 1 0
chr11:68049989|68050186 hsa-miR-6781-5p 0 1 0
chr11:68049989|68050186 hsa-miR-3191-3p 0 1 0
chr11:68049989|68050186 hsa-miR-6813-3p 1 1 0
chr11:68049989|68050186 hsa-miR-6886-3p 1 0 0
chr11:68049989|68050186 hsa-miR-5088-3p 1 0 0
chr11:68049989|68050186 hsa-miR-6880-3p 1 0 0
chr11:68049989|68050186 hsa-miR-92a-3p 0 1 0
chr11:68049989|68050186 hsa-miR-25-3p 0 1 0
chr11:68049989|68050186 hsa-miR-4433a-5p 0 1 0
chr11:68049989|68050186 hsa-miR-3173-5p 0 1 0
chr11:68049989|68050186 hsa-miR-4433b-5p 0 1 0
chr11:68049989|68050186 hsa-miR-6515-3p 0 1 0
chr11:68049989|68050186 hsa-miR-1233-5p 1 0 0
chr11:68049989|68050186 hsa-miR-4763-3p 0 1 0
chr11:68049989|68050186 hsa-miR-6816-5p 1 1 0
chr11:68049989|68050186 hsa-miR-6775-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6737-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6752-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6756-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6819-5p 1 0 0
chr11:68049989|68050186 hsa-miR-7107-5p 1 0 0
chr11:68049989|68050186 hsa-miR-3127-3p 1 0 0
chr11:68049989|68050186 hsa-miR-320a-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6836-5p 0 1 0
chr11:68049989|68050186 hsa-miR-675-5p 1 1 0
chr11:68049989|68050186 hsa-miR-6795-5p 0 1 0
chr11:68049989|68050186 hsa-miR-4633-3p 1 0 0
chr11:68049989|68050186 hsa-miR-6791-3p 1 1 0
chr11:68049989|68050186 hsa-miR-6810-3p 0 1 0
chr11:68049989|68050186 hsa-miR-6829-3p 1 1 0
chr11:68049989|68050186 hsa-miR-10400-3p 1 0 0
chr11:68049989|68050186 hsa-miR-6512-3p 0 1 0
chr11:68049989|68050186 hsa-miR-4756-5p 0 1 0
chr11:68049989|68050186 hsa-miR-6744-3p 1 1 0
chr11:68049989|68050186 hsa-miR-4691-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6500-5p 1 0 0
chr11:68049989|68050186 hsa-miR-6781-3p 1 0 0
chr11:68049989|68050186 hsa-miR-6807-3p 0 1 0
chr11:68049989|68050186 hsa-miR-5699-3p 1 1 0
chr11:68049989|68050186 hsa-miR-92b-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:68049989|68050186
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence LPDASVNGWSSDEEKAGGLDDEEEAEVGAVPSWGWDG
Nucleotide Sequence CTGCCTGACGCATCTGTGAATGGCTGGAGCTCCGATGAGGAAAAGGCAGGGGGCCTGGATGATGAAGAGGAGGCCGAGGTGGGTGCAGTGCCTTCCTGGGGGTGGGACGGCTGA
CircID chr11:68049989|68050186
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MAGAPMRKRQGAWMMKRRPRWVQCLPGGGTAEALPALTAPAPQLVPSEVLMHQAIHTIE
Nucleotide Sequence ATGGCTGGAGCTCCGATGAGGAAAAGGCAGGGGGCCTGGATGATGAAGAGGAGGCCGAGGTGGGTGCAGTGCCTTCCTGGGGGTGGGACGGCTGAGGCCCTGCCGGCCCTCACTGCACCCGCCCCGCAGCTCGTCCCCTCCGAGGTGCTCATGCACCAGGCCATCCACACCATCGAG
CircID chr11:68049989|68050186
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MGVGRLRPCRPSLHPPRSSSPPRCSCTRPSTPSS
Nucleotide Sequence CTGGGGGTGGGACGGCTGAGGCCCTGCCGGCCCTCACTGCACCCGCCCCGCAGCTCGTCCCCTCCGAGGTGCTCATGCACCAGGCCATCCACACCATCGAGT
CircID chr11:68049989|68050186
ORF Type ORF4
Protein Length 64
Nucleotide Length 192
Protein Sequence MVWMAWCMSTSEGTSCGAGAVRAGRASAVPPPGRHCTHLGLLFIIQAPCLFLIGAPAIHRCVRQ
Nucleotide Sequence ATGGTGTGGATGGCCTGGTGCATGAGCACCTCGGAGGGGACGAGCTGCGGGGCGGGTGCAGTGAGGGCCGGCAGGGCCTCAGCCGTCCCACCCCCAGGAAGGCACTGCACCCACCTCGGCCTCCTCTTCATCATCCAGGCCCCCTGCCTTTTCCTCATCGGAGCTCCAGCCATTCACAGATGCGTCAGGCAG
CircID chr11:68049989|68050186
ORF Type ORF5
Protein Length 59
Nucleotide Length 177
Protein Sequence MVHEHLGGDELRGGCSEGRQGLSRPTPRKALHPPRPPLHHPGPLPFPHRSSSHSQMRQA
Nucleotide Sequence CTGGTGCATGAGCACCTCGGAGGGGACGAGCTGCGGGGCGGGTGCAGTGAGGGCCGGCAGGGCCTCAGCCGTCCCACCCCCAGGAAGGCACTGCACCCACCTCGGCCTCCTCTTCATCATCCAGGCCCCCTGCCTTTTCCTCATCGGAGCTCCAGCCATTCACAGATGCGTCAGGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab