CircRNA Information

General Information
circRNA Basic Information
CircID chr11:68155596|68155746
Strand +
CircType exon
Host Gene ENSG00000110066.13;
Algorism CIRI2;
Sequence CTGTCCGAGGCACCCGGAGCACTTTGCAGAGCACGTCCAGCCCTCATGGGGTCCCTGCATAGAAATGTGAACCCCTGCCACTGAGGAAGATGAAGGTAGACCCTGTGTCTGGAGGTGCTGGAGGGCAGCGGGTCACCTCTTGTATTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:68155596|68155746 hsa-miR-17-5p 0 0 1
chr11:68155596|68155746 hsa-miR-17-3p 0 0 1
chr11:68155596|68155746 hsa-miR-20a-5p 0 0 1
chr11:68155596|68155746 hsa-miR-20a-3p 0 0 1
chr11:68155596|68155746 hsa-miR-23a-5p 0 0 1
chr11:68155596|68155746 hsa-miR-23a-3p 0 0 1
chr11:68155596|68155746 hsa-miR-93-5p 0 0 1
chr11:68155596|68155746 hsa-miR-93-3p 0 0 1
chr11:68155596|68155746 hsa-miR-106a-5p 0 0 1
chr11:68155596|68155746 hsa-miR-106a-3p 0 0 1
chr11:68155596|68155746 hsa-miR-205-5p 0 0 1
chr11:68155596|68155746 hsa-miR-205-3p 0 0 1
chr11:68155596|68155746 hsa-miR-23b-5p 0 0 1
chr11:68155596|68155746 hsa-miR-23b-3p 0 0 1
chr11:68155596|68155746 hsa-miR-106b-5p 0 0 1
chr11:68155596|68155746 hsa-miR-106b-3p 0 0 1
chr11:68155596|68155746 hsa-miR-302a-5p 0 0 1
chr11:68155596|68155746 hsa-miR-302a-3p 0 0 1
chr11:68155596|68155746 hsa-miR-302b-5p 0 0 1
chr11:68155596|68155746 hsa-miR-302b-3p 0 0 1
chr11:68155596|68155746 hsa-miR-302c-5p 0 0 1
chr11:68155596|68155746 hsa-miR-302c-3p 0 0 1
chr11:68155596|68155746 hsa-miR-302d-5p 0 0 1
chr11:68155596|68155746 hsa-miR-302d-3p 0 0 1
chr11:68155596|68155746 hsa-miR-372-5p 0 0 1
chr11:68155596|68155746 hsa-miR-372-3p 0 0 1
chr11:68155596|68155746 hsa-miR-373-5p 0 0 1
chr11:68155596|68155746 hsa-miR-373-3p 0 0 1
chr11:68155596|68155746 hsa-miR-381-5p 0 0 1
chr11:68155596|68155746 hsa-miR-381-3p 0 0 1
chr11:68155596|68155746 hsa-miR-20b-5p 0 0 1
chr11:68155596|68155746 hsa-miR-20b-3p 0 0 1
chr11:68155596|68155746 hsa-miR-520e-5p 0 0 1
chr11:68155596|68155746 hsa-miR-520e-3p 0 0 1
chr11:68155596|68155746 hsa-miR-520b-5p 0 0 1
chr11:68155596|68155746 hsa-miR-520b-3p 0 0 1
chr11:68155596|68155746 hsa-miR-519d-5p 0 0 1
chr11:68155596|68155746 hsa-miR-519d-3p 0 0 1
chr11:68155596|68155746 hsa-miR-520g-5p 0 0 1
chr11:68155596|68155746 hsa-miR-520g-3p 0 0 1
chr11:68155596|68155746 hsa-miR-520h 0 1 1
chr11:68155596|68155746 hsa-miR-527 0 0 1
chr11:68155596|68155746 hsa-miR-766-5p 0 0 1
chr11:68155596|68155746 hsa-miR-766-3p 0 0 1
chr11:68155596|68155746 hsa-miR-300 0 1 1
chr11:68155596|68155746 hsa-miR-1182 0 0 1
chr11:68155596|68155746 hsa-miR-302e 0 0 1
chr11:68155596|68155746 hsa-miR-338-3p 0 0 1
chr11:68155596|68155746 hsa-miR-1207-5p 1 1 1
chr11:68155596|68155746 hsa-miR-520d-3p 0 0 1
chr11:68155596|68155746 hsa-miR-518a-5p 0 0 1
chr11:68155596|68155746 hsa-miR-520a-3p 0 1 1
chr11:68155596|68155746 hsa-miR-520c-3p 0 0 1
chr11:68155596|68155746 hsa-miR-220c 0 0 1
chr11:68155596|68155746 hsa-miR-595 1 0 0
chr11:68155596|68155746 hsa-miR-663a 1 0 0
chr11:68155596|68155746 hsa-miR-762 1 0 0
chr11:68155596|68155746 hsa-miR-3652 0 1 0
chr11:68155596|68155746 hsa-miR-3907 1 0 0
chr11:68155596|68155746 hsa-miR-4492 1 1 0
chr11:68155596|68155746 hsa-miR-4498 1 0 0
chr11:68155596|68155746 hsa-miR-4508 1 0 0
chr11:68155596|68155746 hsa-miR-4721 0 1 0
chr11:68155596|68155746 hsa-miR-4741 1 0 0
chr11:68155596|68155746 hsa-miR-7150 0 1 0
chr11:68155596|68155746 hsa-miR-211-3p 0 1 0
chr11:68155596|68155746 hsa-miR-18a-3p 0 1 0
chr11:68155596|68155746 hsa-miR-3194-3p 1 0 0
chr11:68155596|68155746 hsa-miR-6721-5p 1 0 0
chr11:68155596|68155746 hsa-miR-185-3p 0 1 0
chr11:68155596|68155746 hsa-miR-1226-5p 1 1 0
chr11:68155596|68155746 hsa-miR-193b-5p 1 0 0
chr11:68155596|68155746 hsa-miR-296-3p 1 0 0
chr11:68155596|68155746 hsa-miR-6823-5p 1 0 0
chr11:68155596|68155746 hsa-miR-7854-3p 0 1 0
chr11:68155596|68155746 hsa-miR-4446-3p 1 1 0
chr11:68155596|68155746 hsa-miR-4763-3p 1 1 0
chr11:68155596|68155746 hsa-miR-6778-5p 0 1 0
chr11:68155596|68155746 hsa-miR-6787-5p 1 0 0
chr11:68155596|68155746 hsa-miR-6816-5p 1 0 0
chr11:68155596|68155746 hsa-miR-6865-5p 1 0 0
chr11:68155596|68155746 hsa-miR-5001-5p 1 1 0
chr11:68155596|68155746 hsa-miR-6743-5p 1 0 0
chr11:68155596|68155746 hsa-miR-6722-3p 0 1 0
chr11:68155596|68155746 hsa-miR-6808-5p 1 0 0
chr11:68155596|68155746 hsa-miR-3620-5p 1 0 0
chr11:68155596|68155746 hsa-miR-6846-5p 1 0 0
chr11:68155596|68155746 hsa-miR-6848-5p 1 0 0
chr11:68155596|68155746 hsa-miR-3940-5p 1 0 0
chr11:68155596|68155746 hsa-miR-5008-3p 1 0 0
chr11:68155596|68155746 hsa-miR-3059-5p 1 0 0
chr11:68155596|68155746 hsa-miR-498-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:68155596|68155746
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence LSEAPGALCRARPALMGSLHRNVNPCH
Nucleotide Sequence CTGTCCGAGGCACCCGGAGCACTTTGCAGAGCACGTCCAGCCCTCATGGGGTCCCTGCATAGAAATGTGAACCCCTGCCACTGA
CircID chr11:68155596|68155746
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MPLRKMKVDPVSGGAGGQRVTSCIP
Nucleotide Sequence CTGCCACTGAGGAAGATGAAGGTAGACCCTGTGTCTGGAGGTGCTGGAGGGCAGCGGGTCACCTCTTGTATTCCC
CircID chr11:68155596|68155746
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MPSSTSRHRVYLHLPQWQGFTFLCRDPMRAGRALQSAPGASD
Nucleotide Sequence CTGCCCTCCAGCACCTCCAGACACAGGGTCTACCTTCATCTTCCTCAGTGGCAGGGGTTCACATTTCTATGCAGGGACCCCATGAGGGCTGGACGTGCTCTGCAAAGTGCTCCGGGTGCCTCGGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab