CircRNA Information

General Information
circRNA Basic Information
CircID chr11:68445849|68445975
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGTCTAACTCCTGCAATGACGCCCTTGTTCCGAACACTCAGGGGCTCTGCGTCCCTGCTGAAGCCCTGACACAGAAGTCACCACGCTGAGGGAGGGGCCACAGTCCCACTCCAGACAAAGGCACCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:68445849|68445975 hsa-miR-214-5p 0 0 1
chr11:68445849|68445975 hsa-miR-214-3p 0 0 1
chr11:68445849|68445975 hsa-miR-122-5p 0 0 1
chr11:68445849|68445975 hsa-miR-122-3p 0 0 1
chr11:68445849|68445975 hsa-miR-592 0 0 1
chr11:68445849|68445975 hsa-miR-597-5p 0 0 1
chr11:68445849|68445975 hsa-miR-597-3p 0 0 1
chr11:68445849|68445975 hsa-miR-616-5p 0 0 1
chr11:68445849|68445975 hsa-miR-616-3p 0 0 1
chr11:68445849|68445975 hsa-miR-617 0 0 1
chr11:68445849|68445975 hsa-miR-632 0 0 1
chr11:68445849|68445975 hsa-miR-922 0 0 1
chr11:68445849|68445975 hsa-miR-1231 0 0 1
chr11:68445849|68445975 hsa-miR-663b 0 1 1
chr11:68445849|68445975 hsa-miR-1286 0 0 1
chr11:68445849|68445975 hsa-miR-1225-3p 0 1 1
chr11:68445849|68445975 hsa-miR-574-5p 0 0 1
chr11:68445849|68445975 hsa-miR-342-5p 0 0 1
chr11:68445849|68445975 hsa-miR-125a-5p 0 0 1
chr11:68445849|68445975 hsa-miR-125b 0 0 1
chr11:68445849|68445975 hsa-miR-516b 0 0 1
chr11:68445849|68445975 hsa-miR-151-3p 0 0 1
chr11:68445849|68445975 hsa-miR-608 1 1 0
chr11:68445849|68445975 hsa-miR-1268a 1 0 0
chr11:68445849|68445975 hsa-miR-1469 1 0 0
chr11:68445849|68445975 hsa-miR-3141 1 0 0
chr11:68445849|68445975 hsa-miR-4291 0 1 0
chr11:68445849|68445975 hsa-miR-3659 1 1 0
chr11:68445849|68445975 hsa-miR-1268b 1 0 0
chr11:68445849|68445975 hsa-miR-4469 0 1 0
chr11:68445849|68445975 hsa-miR-4481 0 1 0
chr11:68445849|68445975 hsa-miR-4648 0 1 0
chr11:68445849|68445975 hsa-miR-4669 1 0 0
chr11:68445849|68445975 hsa-miR-7974 0 1 0
chr11:68445849|68445975 hsa-miR-211-3p 0 1 0
chr11:68445849|68445975 hsa-miR-6510-5p 0 1 0
chr11:68445849|68445975 hsa-miR-6727-5p 1 0 0
chr11:68445849|68445975 hsa-miR-6821-5p 1 0 0
chr11:68445849|68445975 hsa-miR-6735-3p 1 1 0
chr11:68445849|68445975 hsa-miR-3127-5p 0 1 0
chr11:68445849|68445975 hsa-miR-4685-5p 1 0 0
chr11:68445849|68445975 hsa-miR-4745-5p 0 1 0
chr11:68445849|68445975 hsa-miR-1266-5p 0 1 0
chr11:68445849|68445975 hsa-miR-6837-5p 0 1 0
chr11:68445849|68445975 hsa-miR-515-3p 0 1 0
chr11:68445849|68445975 hsa-miR-3619-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:68445849|68445975
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MSGVGLWPLPQRGDFCVRASAGTQSP
Nucleotide Sequence TTGTCTGGAGTGGGACTGTGGCCCCTCCCTCAGCGTGGTGACTTCTGTGTCAGGGCTTCAGCAGGGACGCAGAGCCCCTGA

CircID chr11:68445849|68445975
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MEWDCGPSLSVVTSVSGLQQGRRAPECSEQGRHCRS
Nucleotide Sequence CTGGAGTGGGACTGTGGCCCCTCCCTCAGCGTGGTGACTTCTGTGTCAGGGCTTCAGCAGGGACGCAGAGCCCCTGAGTGTTCGGAACAAGGGCGTCATTGCAGGAGTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites