CircNet

General Information

circRNA Basic Information

CircID	chr11:68544838\|68571104
Strand	+
CircType	exon
Host Gene	ENSG00000110075.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTATCCAAATATATCTTGTGAGTTGCTCACTTCTGATGTCTCCCAGATGAATGATAGACTGGGAGAAGATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATTTGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGGTGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGAATGAGAAGAAACA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr11:68544838\|68571104	hsa-miR-29b-1-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:68544838\|68571104
ORF Type	ORF1
Protein Length	118
Nucleotide Length	354
Protein Sequence	MNDRLGEDESLLMKLYSFLLNDSPLNPLLASFFSKVLSILISRKPEQNMFFKYTWNNFLHTQVEICIALILASPFENTENATITDQDSTGDNLLLKHLFQKCQLIERILEAWEMNEKK
Nucleotide Sequence	ATGAATGATAGACTGGGAGAAGATGAATCCTTGCTAATGAAATTATATAGCTTCCTCCTAAACGATTCCCCTTTGAATCCACTACTTGCCAGTTTCTTCAGCAAGGTGCTAAGTATTCTTATCAGCAGAAAACCAGAACAGAACATGTTCTTCAAGTATACATGGAATAACTTTTTGCATACACAAGTGGAAATTTGTATTGCACTGATTCTTGCAAGTCCTTTTGAAAACACAGAAAATGCCACAATTACCGATCAAGACTCCACTGGTGATAATTTGTTATTAAAACATCTTTTCCAAAAATGTCAATTAATAGAACGAATACTTGAAGCCTGGGAAATGAATGAGAAGAAA

CircID	chr11:68544838\|68571104
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MFCSGFLLIRILSTLLKKLASSGFKGESFRRKLYNFISKDSSSPSLSFIWETSEVSNSQDIFGY
Nucleotide Sequence	ATGTTCTGTTCTGGTTTTCTGCTGATAAGAATACTTAGCACCTTGCTGAAGAAACTGGCAAGTAGTGGATTCAAAGGGGAATCGTTTAGGAGGAAGCTATATAATTTCATTAGCAAGGATTCATCTTCTCCCAGTCTATCATTCATCTGGGAGACATCAGAAGTGAGCAACTCACAAGATATATTTGGATAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:68544838\|68571104	RBM5	0	0	1
chr11:68544838\|68571104	ELAVL1	2	3	0
chr11:68544838\|68571104	CELF2	0	3	0
chr11:68544838\|68571104	UPF1	0	0	1
chr11:68544838\|68571104	SRSF10	1	0	0
chr11:68544838\|68571104	TAF15	3	0	0
chr11:68544838\|68571104	FMR1	0	0	2
chr11:68544838\|68571104	FUS	1	0	0
chr11:68544838\|68571104	DGCR8	1	0	0
chr11:68544838\|68571104	NOP58	1	3	2
chr11:68544838\|68571104	U2AF2	4	8	1
chr11:68544838\|68571104	DDX54	0	1	12
chr11:68544838\|68571104	RBM10	1	1	0
chr11:68544838\|68571104	HNRNPM	3	0	0
chr11:68544838\|68571104	PTBP1	0	0	1
chr11:68544838\|68571104	HNRNPC	0	1	0
chr11:68544838\|68571104	ZNF184	0	0	1
chr11:68544838\|68571104	MSI1	1	0	0
chr11:68544838\|68571104	ACIN1	0	0	5
chr11:68544838\|68571104	LIN28B	0	0	4
chr11:68544838\|68571104	FXR2	0	1	0
chr11:68544838\|68571104	IGF2BP3	0	0	1
chr11:68544838\|68571104	IGF2BP2	0	0	5
chr11:68544838\|68571104	YTHDC1	0	1	0
chr11:68544838\|68571104	RBM47	0	0	2
chr11:68544838\|68571104	CSTF2T	0	0	3
chr11:68544838\|68571104	CSTF2	0	1	0
chr11:68544838\|68571104	RBM22	0	1	0
chr11:68544838\|68571104	TIAL1	0	2	0
chr11:68544838\|68571104	FBL	1	1	4
chr11:68544838\|68571104	EIF4A3	4	4	5
chr11:68544838\|68571104	AGO2	0	0	5

CircRNA Information