CircRNA Information

General Information
circRNA Basic Information
CircID chr11:68614971|68615207
Strand -
CircType exon
Host Gene ENSG00000110075.13;
Algorism CIRI2;
Sequence CTGGTGGCTTCTCCATCCCACTGTGGCCTCTGTGGTATGGACCTGGTGGCTTCTCCATCCTACCCAAGGTAACAGTGTCTTGCTTCATCCCACTGACTGCTGGGAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAGCAGGGAAAGGATATGACAATGGGGAGGACAGTTCTTTTGGAGGTTGGAGGGGCCAAGCCAAGGACAGGAGCAAGTGTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:68614971|68615207 hsa-miR-150-5p 0 0 1
chr11:68614971|68615207 hsa-miR-150-3p 0 0 1
chr11:68614971|68615207 hsa-miR-328-5p 0 0 1
chr11:68614971|68615207 hsa-miR-328-3p 0 0 1
chr11:68614971|68615207 hsa-miR-1208 0 0 1
chr11:68614971|68615207 hsa-miR-1265 0 0 1
chr11:68614971|68615207 hsa-miR-1322 0 0 1
chr11:68614971|68615207 hsa-miR-532-3p 0 0 1
chr11:68614971|68615207 hsa-miR-1225-5p 0 0 1
chr11:68614971|68615207 hsa-miR-501-5p 0 1 1
chr11:68614971|68615207 hsa-miR-140-3p 0 0 1
chr11:68614971|68615207 hsa-miR-362-5p 0 0 1
chr11:68614971|68615207 hsa-miR-1274a 0 0 1
chr11:68614971|68615207 hsa-miR-128 0 0 1
chr11:68614971|68615207 hsa-miR-133b 0 1 0
chr11:68614971|68615207 hsa-miR-346 1 0 0
chr11:68614971|68615207 hsa-miR-588 0 1 0
chr11:68614971|68615207 hsa-miR-3909 1 0 0
chr11:68614971|68615207 hsa-miR-4511 0 1 0
chr11:68614971|68615207 hsa-miR-4531 0 1 0
chr11:68614971|68615207 hsa-miR-4534 0 1 0
chr11:68614971|68615207 hsa-miR-4654 0 1 0
chr11:68614971|68615207 hsa-miR-451b 0 1 0
chr11:68614971|68615207 hsa-miR-4739 1 0 0
chr11:68614971|68615207 hsa-miR-5193 1 0 0
chr11:68614971|68615207 hsa-miR-8060 1 0 0
chr11:68614971|68615207 hsa-miR-6749-3p 1 0 0
chr11:68614971|68615207 hsa-miR-6861-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6894-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6892-3p 1 0 0
chr11:68614971|68615207 hsa-miR-6728-5p 0 1 0
chr11:68614971|68615207 hsa-miR-5187-5p 0 1 0
chr11:68614971|68615207 hsa-miR-6089 1 1 0
chr11:68614971|68615207 hsa-miR-197-5p 1 0 0
chr11:68614971|68615207 hsa-miR-7110-3p 0 1 0
chr11:68614971|68615207 hsa-miR-6845-3p 1 0 0
chr11:68614971|68615207 hsa-miR-2467-5p 0 1 0
chr11:68614971|68615207 hsa-miR-6798-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6786-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6772-3p 0 1 0
chr11:68614971|68615207 hsa-miR-4786-3p 0 1 0
chr11:68614971|68615207 hsa-miR-1229-5p 1 1 0
chr11:68614971|68615207 hsa-miR-6878-3p 1 1 0
chr11:68614971|68615207 hsa-miR-7111-3p 1 0 0
chr11:68614971|68615207 hsa-miR-4733-3p 0 1 0
chr11:68614971|68615207 hsa-miR-6776-3p 1 0 0
chr11:68614971|68615207 hsa-miR-194-3p 1 0 0
chr11:68614971|68615207 hsa-miR-3189-3p 0 1 0
chr11:68614971|68615207 hsa-miR-1236-3p 1 0 0
chr11:68614971|68615207 hsa-miR-4742-3p 1 0 0
chr11:68614971|68615207 hsa-miR-6813-3p 1 0 0
chr11:68614971|68615207 hsa-miR-3180-5p 0 1 0
chr11:68614971|68615207 hsa-miR-6887-3p 1 1 0
chr11:68614971|68615207 hsa-miR-519d-5p 0 1 0
chr11:68614971|68615207 hsa-miR-216a-3p 0 1 0
chr11:68614971|68615207 hsa-miR-6755-3p 1 1 0
chr11:68614971|68615207 hsa-miR-4749-3p 1 1 0
chr11:68614971|68615207 hsa-miR-6760-3p 1 0 0
chr11:68614971|68615207 hsa-miR-224-3p 0 1 0
chr11:68614971|68615207 hsa-miR-6748-3p 0 1 0
chr11:68614971|68615207 hsa-miR-4717-5p 0 1 0
chr11:68614971|68615207 hsa-miR-6734-3p 1 0 0
chr11:68614971|68615207 hsa-miR-6780b-3p 1 0 0
chr11:68614971|68615207 hsa-miR-5699-5p 0 1 0
chr11:68614971|68615207 hsa-miR-133a-3p 0 1 0
chr11:68614971|68615207 hsa-miR-6812-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6756-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6819-5p 0 1 0
chr11:68614971|68615207 hsa-miR-4725-3p 0 1 0
chr11:68614971|68615207 hsa-miR-4769-5p 0 1 0
chr11:68614971|68615207 hsa-miR-6792-3p 1 0 0
chr11:68614971|68615207 hsa-miR-6744-3p 1 0 0
chr11:68614971|68615207 hsa-miR-4691-5p 1 0 0
chr11:68614971|68615207 hsa-miR-6843-3p 1 0 0
chr11:68614971|68615207 hsa-miR-515-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:68614971|68615207
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MLGESLWDFSLGHHFVLSFVAGKGYDNGEDSSFGGWRGQAKDRSKCA
Nucleotide Sequence CTGCTGGGAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAGCAGGGAAAGGATATGACAATGGGGAGGACAGTTCTTTTGGAGGTTGGAGGGGCCAAGCCAAGGACAGGAGCAAGTGTGCC
CircID chr11:68614971|68615207
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MLHPTDCWERASGTFLWGIILFCLS
Nucleotide Sequence TTGCTTCATCCCACTGACTGCTGGGAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAG
CircID chr11:68614971|68615207
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MWPLWYGPGGFSILPKVTVSCFIPLTAGREPLGLFFGASFCFVFRSRERI
Nucleotide Sequence CTGTGGCCTCTGTGGTATGGACCTGGTGGCTTCTCCATCCTACCCAAGGTAACAGTGTCTTGCTTCATCCCACTGACTGCTGGGAGAGAGCCTCTGGGACTTTTCTTTGGGGCATCATTTTGTTTTGTCTTTCGTAGCAGGGAAAGGATATGA
CircID chr11:68614971|68615207
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MAPPTSKRTVLPIVISFPCYERQNKMMPQRKVPEALSQQSVG
Nucleotide Sequence TTGGCCCCTCCAACCTCCAAAAGAACTGTCCTCCCCATTGTCATATCCTTTCCCTGCTACGAAAGACAAAACAAAATGATGCCCCAAAGAAAAGTCCCAGAGGCTCTCTCCCAGCAGTCAGTGGGATGA
CircID chr11:68614971|68615207
ORF Type ORF5
Protein Length 25
Nucleotide Length 75
Protein Sequence MLPWVGWRSHQVHTTEATVGWRSHQ
Nucleotide Sequence CTGTTACCTTGGGTAGGATGGAGAAGCCACCAGGTCCATACCACAGAGGCCACAGTGGGATGGAGAAGCCACCAG
CircID chr11:68614971|68615207
ORF Type ORF6
Protein Length 31
Nucleotide Length 96
Protein Sequence MLLSLAWPLQPPKELSSPLSYPFPATKDKTK
Nucleotide Sequence TTGCTCCTGTCCTTGGCTTGGCCCCTCCAACCTCCAAAAGAACTGTCCTCCCCATTGTCATATCCTTTCCCTGCTACGAAAGACAAAACAAAATGA
CircID chr11:68614971|68615207
ORF Type ORF7
Protein Length 53
Nucleotide Length 159
Protein Sequence MLRKTKQNDAPKKSPRGSLPAVSGMKQDTVTLGRMEKPPGPYHRGHSGMEKPP
Nucleotide Sequence CTGCTACGAAAGACAAAACAAAATGATGCCCCAAAGAAAAGTCCCAGAGGCTCTCTCCCAGCAGTCAGTGGGATGAAGCAAGACACTGTTACCTTGGGTAGGATGGAGAAGCCACCAGGTCCATACCACAGAGGCCACAGTGGGATGGAGAAGCCACCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab