CircRNA Information

General Information
circRNA Basic Information
CircID chr11:68939645|68939869
Strand +
CircType exon
Host Gene ENSG00000132740.7;
Algorism CIRI2;
Sequence CTTCCCCAACAGGGCCCTCCGCTCCTCCCCCATAGGCCCCTCCGCTCCTCTGTGGCCCTGGTGGAGGCGGAGCATGGTCTGCCAGCGCCCTGGGCTACCATGGAGAGAGCTCCGCGGGGCGTGCAAGGATGCGGCCGGTCACGTCCCCCTCTCCTTCCTCCGGCTGGTCCTCTGGTTGCTGAGCTCACTCAGCTTCTTATCCAGCCTCCTCTGCAGCTGGGCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:68939645|68939869 hsa-miR-136-5p 0 0 1
chr11:68939645|68939869 hsa-miR-136-3p 0 0 1
chr11:68939645|68939869 hsa-miR-545-5p 0 0 1
chr11:68939645|68939869 hsa-miR-545-3p 0 0 1
chr11:68939645|68939869 hsa-miR-591 0 0 1
chr11:68939645|68939869 hsa-miR-625-5p 0 0 1
chr11:68939645|68939869 hsa-miR-625-3p 0 0 1
chr11:68939645|68939869 hsa-miR-658 1 1 1
chr11:68939645|68939869 hsa-miR-765 0 1 1
chr11:68939645|68939869 hsa-miR-1287-5p 0 0 1
chr11:68939645|68939869 hsa-miR-1287-3p 0 0 1
chr11:68939645|68939869 hsa-miR-1291 0 0 1
chr11:68939645|68939869 hsa-miR-1261 0 0 1
chr11:68939645|68939869 hsa-miR-1275 0 1 1
chr11:68939645|68939869 hsa-miR-1281 0 0 1
chr11:68939645|68939869 hsa-miR-485-5p 0 1 1
chr11:68939645|68939869 hsa-miR-146b-3p 0 0 1
chr11:68939645|68939869 hsa-miR-423-5p 1 1 1
chr11:68939645|68939869 hsa-miR-502-5p 0 0 1
chr11:68939645|68939869 hsa-miR-362-5p 0 0 1
chr11:68939645|68939869 hsa-miR-1274b 0 0 1
chr11:68939645|68939869 hsa-miR-762 1 0 0
chr11:68939645|68939869 hsa-miR-1182 1 0 0
chr11:68939645|68939869 hsa-miR-2861 1 0 0
chr11:68939645|68939869 hsa-miR-3174 0 1 0
chr11:68939645|68939869 hsa-miR-3185 1 0 0
chr11:68939645|68939869 hsa-miR-3196 1 1 0
chr11:68939645|68939869 hsa-miR-3651 0 1 0
chr11:68939645|68939869 hsa-miR-3918 1 1 0
chr11:68939645|68939869 hsa-miR-4428 0 1 0
chr11:68939645|68939869 hsa-miR-4430 1 1 0
chr11:68939645|68939869 hsa-miR-4437 0 1 0
chr11:68939645|68939869 hsa-miR-4462 1 0 0
chr11:68939645|68939869 hsa-miR-4476 0 1 0
chr11:68939645|68939869 hsa-miR-4478 1 0 0
chr11:68939645|68939869 hsa-miR-4525 1 0 0
chr11:68939645|68939869 hsa-miR-4533 1 1 0
chr11:68939645|68939869 hsa-miR-1587 1 0 0
chr11:68939645|68939869 hsa-miR-4656 1 0 0
chr11:68939645|68939869 hsa-miR-4688 1 0 0
chr11:68939645|68939869 hsa-miR-4706 1 0 0
chr11:68939645|68939869 hsa-miR-4739 1 1 0
chr11:68939645|68939869 hsa-miR-4751 1 1 0
chr11:68939645|68939869 hsa-miR-5194 1 0 0
chr11:68939645|68939869 hsa-miR-5706 0 1 0
chr11:68939645|68939869 hsa-miR-6085 1 0 0
chr11:68939645|68939869 hsa-miR-6086 1 0 0
chr11:68939645|68939869 hsa-miR-6090 1 1 0
chr11:68939645|68939869 hsa-miR-6127 1 0 0
chr11:68939645|68939869 hsa-miR-6133 1 0 0
chr11:68939645|68939869 hsa-miR-8072 1 0 0
chr11:68939645|68939869 hsa-miR-8077 0 1 0
chr11:68939645|68939869 hsa-miR-12115 1 0 0
chr11:68939645|68939869 hsa-miR-12122 0 1 0
chr11:68939645|68939869 hsa-miR-127-5p 0 1 0
chr11:68939645|68939869 hsa-miR-4433b-3p 1 1 0
chr11:68939645|68939869 hsa-miR-4665-3p 1 0 0
chr11:68939645|68939869 hsa-miR-4433a-3p 1 0 0
chr11:68939645|68939869 hsa-miR-671-5p 1 0 0
chr11:68939645|68939869 hsa-miR-7106-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6825-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6894-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6854-5p 0 1 0
chr11:68939645|68939869 hsa-miR-6799-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6089 1 0 0
chr11:68939645|68939869 hsa-miR-7847-3p 1 0 0
chr11:68939645|68939869 hsa-miR-4695-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6746-5p 1 0 0
chr11:68939645|68939869 hsa-miR-24-3p 0 1 0
chr11:68939645|68939869 hsa-miR-3180-3p 1 1 0
chr11:68939645|68939869 hsa-miR-6805-5p 1 0 0
chr11:68939645|68939869 hsa-miR-2467-3p 0 1 0
chr11:68939645|68939869 hsa-miR-6786-5p 1 0 0
chr11:68939645|68939869 hsa-miR-7109-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6784-5p 0 1 0
chr11:68939645|68939869 hsa-miR-4640-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6753-5p 0 1 0
chr11:68939645|68939869 hsa-miR-5001-3p 0 1 0
chr11:68939645|68939869 hsa-miR-6847-5p 1 1 0
chr11:68939645|68939869 hsa-miR-4743-5p 1 0 0
chr11:68939645|68939869 hsa-miR-149-3p 1 1 0
chr11:68939645|68939869 hsa-miR-4733-3p 0 1 0
chr11:68939645|68939869 hsa-miR-6824-5p 1 0 0
chr11:68939645|68939869 hsa-miR-3158-5p 0 1 0
chr11:68939645|68939869 hsa-miR-6781-5p 1 0 0
chr11:68939645|68939869 hsa-miR-7160-3p 0 1 0
chr11:68939645|68939869 hsa-miR-3191-3p 1 1 0
chr11:68939645|68939869 hsa-miR-7846-3p 0 1 0
chr11:68939645|68939869 hsa-miR-6868-5p 0 1 0
chr11:68939645|68939869 hsa-miR-6850-3p 1 1 0
chr11:68939645|68939869 hsa-miR-10400-5p 1 0 0
chr11:68939645|68939869 hsa-miR-1233-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6787-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6816-5p 1 0 0
chr11:68939645|68939869 hsa-miR-1343-5p 1 0 0
chr11:68939645|68939869 hsa-miR-5001-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6743-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6756-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6803-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6813-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6851-5p 1 0 0
chr11:68939645|68939869 hsa-miR-1249-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6722-3p 1 0 0
chr11:68939645|68939869 hsa-miR-6797-5p 1 0 0
chr11:68939645|68939869 hsa-miR-7111-5p 1 1 0
chr11:68939645|68939869 hsa-miR-1915-3p 0 1 0
chr11:68939645|68939869 hsa-miR-3620-5p 1 0 0
chr11:68939645|68939869 hsa-miR-4728-5p 1 0 0
chr11:68939645|68939869 hsa-miR-10396b-5p 1 0 0
chr11:68939645|68939869 hsa-miR-1237-5p 1 0 0
chr11:68939645|68939869 hsa-miR-328-5p 1 0 0
chr11:68939645|68939869 hsa-miR-4632-5p 1 0 0
chr11:68939645|68939869 hsa-miR-4649-5p 1 0 0
chr11:68939645|68939869 hsa-miR-4685-5p 1 1 0
chr11:68939645|68939869 hsa-miR-4726-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6729-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6738-5p 1 0 0
chr11:68939645|68939869 hsa-miR-675-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6795-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6846-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6848-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6858-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6887-5p 1 0 0
chr11:68939645|68939869 hsa-miR-6845-5p 1 0 0
chr11:68939645|68939869 hsa-miR-939-5p 1 1 0
chr11:68939645|68939869 hsa-miR-10396a-3p 1 0 0
chr11:68939645|68939869 hsa-miR-6856-5p 1 0 0
chr11:68939645|68939869 hsa-miR-1914-3p 1 0 0
chr11:68939645|68939869 hsa-miR-4665-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6876-5p 0 1 0
chr11:68939645|68939869 hsa-miR-6891-5p 1 1 0
chr11:68939645|68939869 hsa-miR-3184-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6762-5p 1 1 0
chr11:68939645|68939869 hsa-miR-6837-5p 0 1 0
chr11:68939645|68939869 hsa-miR-6884-5p 0 1 0
chr11:68939645|68939869 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:68939645|68939869
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MVEAEHGLPAPWATMERAPRGVQGCGRSRPPLLPPAGPLVAELTQLLIQPPLQLGP
Nucleotide Sequence CTGGTGGAGGCGGAGCATGGTCTGCCAGCGCCCTGGGCTACCATGGAGAGAGCTCCGCGGGGCGTGCAAGGATGCGGCCGGTCACGTCCCCCTCTCCTTCCTCCGGCTGGTCCTCTGGTTGCTGAGCTCACTCAGCTTCTTATCCAGCCTCCTCTGCAGCTGGGCCCT
CircID chr11:68939645|68939869
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MWPWWRRSMVCQRPGLPWRELRGACKDAAGHVPLSFLRLVLWLLSSLSFLSSLLCSWA
Nucleotide Sequence CTGTGGCCCTGGTGGAGGCGGAGCATGGTCTGCCAGCGCCCTGGGCTACCATGGAGAGAGCTCCGCGGGGCGTGCAAGGATGCGGCCGGTCACGTCCCCCTCTCCTTCCTCCGGCTGGTCCTCTGGTTGCTGAGCTCACTCAGCTTCTTATCCAGCCTCCTCTGCAGCTGGGCC
CircID chr11:68939645|68939869
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MGYHGESSAGRARMRPVTSPSPSSGWSSGC
Nucleotide Sequence CTGGGCTACCATGGAGAGAGCTCCGCGGGGCGTGCAAGGATGCGGCCGGTCACGTCCCCCTCTCCTTCCTCCGGCTGGTCCTCTGGTTGCTGA
CircID chr11:68939645|68939869
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MQRRLDKKLSELSNQRTSRRKERGT
Nucleotide Sequence CTGCAGAGGAGGCTGGATAAGAAGCTGAGTGAGCTCAGCAACCAGAGGACCAGCCGGAGGAAGGAGAGGGGGACGTGA
CircID chr11:68939645|68939869
ORF Type ORF5
Protein Length 42
Nucleotide Length 126
Protein Sequence MHAPRSSLHGSPGRWQTMLRLHQGHRGAEGPMGEERRALLGK
Nucleotide Sequence TTGCACGCCCCGCGGAGCTCTCTCCATGGTAGCCCAGGGCGCTGGCAGACCATGCTCCGCCTCCACCAGGGCCACAGAGGAGCGGAGGGGCCTATGGGGGAGGAGCGGAGGGCCCTGTTGGGGAAG
CircID chr11:68939645|68939869
ORF Type ORF6
Protein Length 33
Nucleotide Length 99
Protein Sequence MVAQGAGRPCSASTRATEERRGLWGRSGGPCWG
Nucleotide Sequence ATGGTAGCCCAGGGCGCTGGCAGACCATGCTCCGCCTCCACCAGGGCCACAGAGGAGCGGAGGGGCCTATGGGGGAGGAGCGGAGGGCCCTGTTGGGGA
CircID chr11:68939645|68939869
ORF Type ORF7
Protein Length 28
Nucleotide Length 84
Protein Sequence MADHAPPPPGPQRSGGAYGGGAEGPVGE
Nucleotide Sequence CTGGCAGACCATGCTCCGCCTCCACCAGGGCCACAGAGGAGCGGAGGGGCCTATGGGGGAGGAGCGGAGGGCCCTGTTGGGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab