CircRNA Information

General Information
circRNA Basic Information
CircID chr11:69159786|69160051
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence ATCGGCACATCATATGAATGTCTAACTCCTTCTATCCAGCGTGACCTGGTTTGCCCAGGACTGAGGGGTTTTCCAGGACATCGAACTTTCCATTTTAAAAACAAGACAGCCCTGGGCAACCCGGAACAGCTGGCCCTCCTAGCTCTGTCGGTACATGCTCATGACAACCATGTGATTTTTCTTCCTTAAAGAGATCAATGAAATGGTACCAGATCATGTTTTTAAAAAGCGAACAATATTTTCCTTAGAGATCAATGAGAATATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:69159786|69160051 hsa-miR-181c-5p 0 0 1
chr11:69159786|69160051 hsa-miR-181c-3p 0 0 1
chr11:69159786|69160051 hsa-miR-375-5p 0 0 1
chr11:69159786|69160051 hsa-miR-375-3p 0 0 1
chr11:69159786|69160051 hsa-miR-431-5p 0 0 1
chr11:69159786|69160051 hsa-miR-431-3p 0 0 1
chr11:69159786|69160051 hsa-miR-181d-5p 0 0 1
chr11:69159786|69160051 hsa-miR-181d-3p 0 0 1
chr11:69159786|69160051 hsa-miR-612 0 0 1
chr11:69159786|69160051 hsa-miR-626 0 0 1
chr11:69159786|69160051 hsa-miR-1287-5p 0 0 1
chr11:69159786|69160051 hsa-miR-1287-3p 0 0 1
chr11:69159786|69160051 hsa-miR-1263 0 0 1
chr11:69159786|69160051 hsa-miR-1272 0 0 1
chr11:69159786|69160051 hsa-miR-1322 0 0 1
chr11:69159786|69160051 hsa-miR-875-3p 0 0 1
chr11:69159786|69160051 hsa-miR-455-5p 0 0 1
chr11:69159786|69160051 hsa-miR-455-3p 0 0 1
chr11:69159786|69160051 hsa-miR-548c-3p 0 0 1
chr11:69159786|69160051 hsa-miR-548d-3p 0 0 1
chr11:69159786|69160051 hsa-miR-181a 0 0 1
chr11:69159786|69160051 hsa-miR-181b 0 0 1
chr11:69159786|69160051 hsa-miR-1285 0 0 1
chr11:69159786|69160051 hsa-miR-453 0 0 1
chr11:69159786|69160051 hsa-miR-3916 1 0 0
chr11:69159786|69160051 hsa-miR-4507 0 1 0
chr11:69159786|69160051 hsa-miR-4510 1 0 0
chr11:69159786|69160051 hsa-miR-3978 0 1 0
chr11:69159786|69160051 hsa-miR-4706 1 0 0
chr11:69159786|69160051 hsa-miR-5705 0 1 0
chr11:69159786|69160051 hsa-miR-6069 1 0 0
chr11:69159786|69160051 hsa-miR-6129 1 0 0
chr11:69159786|69160051 hsa-miR-6820-5p 1 0 0
chr11:69159786|69160051 hsa-miR-656-5p 0 1 0
chr11:69159786|69160051 hsa-miR-4640-5p 1 0 0
chr11:69159786|69160051 hsa-miR-4717-3p 0 1 0
chr11:69159786|69160051 hsa-miR-6789-5p 1 0 0
chr11:69159786|69160051 hsa-miR-181b-5p 0 1 0
chr11:69159786|69160051 hsa-miR-1910-5p 0 1 0
chr11:69159786|69160051 hsa-miR-6715a-3p 0 1 0
chr11:69159786|69160051 hsa-miR-219b-5p 0 1 0
chr11:69159786|69160051 hsa-miR-1233-5p 1 0 0
chr11:69159786|69160051 hsa-miR-6815-5p 1 0 0
chr11:69159786|69160051 hsa-miR-5189-5p 1 1 0
chr11:69159786|69160051 hsa-miR-6862-5p 1 0 0
chr11:69159786|69160051 hsa-miR-328-5p 1 0 0
chr11:69159786|69160051 hsa-miR-4649-5p 1 0 0
chr11:69159786|69160051 hsa-miR-4726-5p 0 1 0
chr11:69159786|69160051 hsa-miR-6858-5p 1 0 0
chr11:69159786|69160051 hsa-miR-1285-3p 0 1 0
chr11:69159786|69160051 hsa-miR-3173-3p 1 0 0
chr11:69159786|69160051 hsa-miR-6876-5p 1 0 0
chr11:69159786|69160051 hsa-miR-6783-3p 0 1 0
chr11:69159786|69160051 hsa-miR-323b-5p 0 1 0
chr11:69159786|69160051 hsa-miR-494-5p 0 1 0
chr11:69159786|69160051 hsa-miR-3059-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:69159786|69160051
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MVCPGLRGFPGHRTFHFKNKTALGNPEQLALLALSVHAHDNHVIFLP
Nucleotide Sequence CTGGTTTGCCCAGGACTGAGGGGTTTTCCAGGACATCGAACTTTCCATTTTAAAAACAAGACAGCCCTGGGCAACCCGGAACAGCTGGCCCTCCTAGCTCTGTCGGTACATGCTCATGACAACCATGTGATTTTTCTTCCTTAA

CircID chr11:69159786|69160051
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MPRAVLFLKWKVRCPGKPLSPGQTRSRWIEGVRHSYDVP
Nucleotide Sequence TTGCCCAGGGCTGTCTTGTTTTTAAAATGGAAAGTTCGATGTCCTGGAAAACCCCTCAGTCCTGGGCAAACCAGGTCACGCTGGATAGAAGGAGTTAGACATTCATATGATGTGCCG

CircID chr11:69159786|69160051
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MIWYHFIDLFKEEKSHGCHEHVPTELGGPAVPGCPGLSCF
Nucleotide Sequence ATGATCTGGTACCATTTCATTGATCTCTTTAAGGAAGAAAAATCACATGGTTGTCATGAGCATGTACCGACAGAGCTAGGAGGGCCAGCTGTTCCGGGTTGCCCAGGGCTGTCTTGTTTTTAA

CircID chr11:69159786|69160051
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MFRVAQGCLVFKMESSMSWKTPQSWANQVTLDRRS
Nucleotide Sequence CTGTTCCGGGTTGCCCAGGGCTGTCTTGTTTTTAAAATGGAAAGTTCGATGTCCTGGAAAACCCCTCAGTCCTGGGCAAACCAGGTCACGCTGGATAGAAGGAGTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites