CircRNA Information

General Information
circRNA Basic Information
CircID chr11:69653805|69654073
Strand -
CircType exon
Host Gene ENSG00000110092.3;
Algorism CIRI2;
Sequence GTGCCACCACGGCGTTGTACCTGTAGGACTCTCATTCGGGATGATTGGAATAGCTTCTGGAATTTGTTCAAGTTTTGGGTATGTTTAATCTGTTATGTACTAGTGTTCTGTTTGTTATTGTTTTGTTAATTACACCATAATGCTAATTTAAAGAGACTCCAAATCTCAATGAAGCCAGCTCACAGTGCTGTGTGCCCCGGTCACCTAGCAAGCTGCCGAACCAAAAGAATTTGCACCCCGCTGCGGGCCCACGTGGTTGGGGCCCTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:69653805|69654073 hsa-miR-19a-5p 0 0 1
chr11:69653805|69654073 hsa-miR-19a-3p 0 0 1
chr11:69653805|69654073 hsa-miR-495-5p 0 0 1
chr11:69653805|69654073 hsa-miR-495-3p 0 0 1
chr11:69653805|69654073 hsa-miR-552-5p 0 0 1
chr11:69653805|69654073 hsa-miR-552-3p 0 0 1
chr11:69653805|69654073 hsa-miR-558 0 0 1
chr11:69653805|69654073 hsa-miR-584-5p 0 0 1
chr11:69653805|69654073 hsa-miR-584-3p 0 0 1
chr11:69653805|69654073 hsa-miR-659-5p 0 0 1
chr11:69653805|69654073 hsa-miR-659-3p 0 0 1
chr11:69653805|69654073 hsa-miR-1323 0 0 1
chr11:69653805|69654073 hsa-miR-1179 0 0 1
chr11:69653805|69654073 hsa-miR-548o-3p 0 0 1
chr11:69653805|69654073 hsa-miR-548o 0 0 1
chr11:69653805|69654073 hsa-miR-296-5p 0 0 1
chr11:69653805|69654073 hsa-miR-1289 0 0 1
chr11:69653805|69654073 hsa-miR-525-5p 0 0 1
chr11:69653805|69654073 hsa-miR-1207-5p 0 0 1
chr11:69653805|69654073 hsa-miR-342-5p 1 0 1
chr11:69653805|69654073 hsa-miR-520a-5p 0 0 1
chr11:69653805|69654073 hsa-miR-19b 0 0 1
chr11:69653805|69654073 hsa-miR-768-5p 0 0 1
chr11:69653805|69654073 hsa-miR-608 1 0 0
chr11:69653805|69654073 hsa-miR-638 1 0 0
chr11:69653805|69654073 hsa-miR-663a 1 0 0
chr11:69653805|69654073 hsa-miR-940 0 1 0
chr11:69653805|69654073 hsa-miR-1324 0 1 0
chr11:69653805|69654073 hsa-miR-2861 1 0 0
chr11:69653805|69654073 hsa-miR-4322 1 0 0
chr11:69653805|69654073 hsa-miR-4450 1 0 0
chr11:69653805|69654073 hsa-miR-4487 0 1 0
chr11:69653805|69654073 hsa-miR-4498 1 0 0
chr11:69653805|69654073 hsa-miR-3960 1 0 0
chr11:69653805|69654073 hsa-miR-4651 1 0 0
chr11:69653805|69654073 hsa-miR-4706 1 0 0
chr11:69653805|69654073 hsa-miR-5572 1 0 0
chr11:69653805|69654073 hsa-miR-6090 1 0 0
chr11:69653805|69654073 hsa-miR-8072 1 0 0
chr11:69653805|69654073 hsa-miR-29b-1-5p 0 1 0
chr11:69653805|69654073 hsa-miR-6747-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6089 1 0 0
chr11:69653805|69654073 hsa-miR-874-5p 0 1 0
chr11:69653805|69654073 hsa-miR-6727-5p 1 1 0
chr11:69653805|69654073 hsa-miR-5589-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6776-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6742-5p 1 0 0
chr11:69653805|69654073 hsa-miR-503-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6772-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6796-5p 1 0 0
chr11:69653805|69654073 hsa-miR-4793-3p 1 1 0
chr11:69653805|69654073 hsa-miR-885-3p 1 1 0
chr11:69653805|69654073 hsa-miR-1908-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6749-5p 1 0 0
chr11:69653805|69654073 hsa-miR-4715-5p 0 1 0
chr11:69653805|69654073 hsa-miR-194-3p 1 0 0
chr11:69653805|69654073 hsa-miR-1225-5p 1 0 0
chr11:69653805|69654073 hsa-miR-654-5p 1 0 0
chr11:69653805|69654073 hsa-miR-3180-5p 0 1 0
chr11:69653805|69654073 hsa-miR-6793-3p 0 1 0
chr11:69653805|69654073 hsa-miR-744-5p 1 0 0
chr11:69653805|69654073 hsa-miR-4712-3p 0 1 0
chr11:69653805|69654073 hsa-miR-5699-5p 0 1 0
chr11:69653805|69654073 hsa-miR-4763-3p 1 1 0
chr11:69653805|69654073 hsa-miR-6787-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6812-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6775-5p 1 1 0
chr11:69653805|69654073 hsa-miR-6737-5p 1 0 0
chr11:69653805|69654073 hsa-miR-6836-5p 1 1 0
chr11:69653805|69654073 hsa-miR-10396a-5p 1 0 0
chr11:69653805|69654073 hsa-miR-10396b-5p 1 0 0
chr11:69653805|69654073 hsa-miR-328-5p 1 0 0
chr11:69653805|69654073 hsa-miR-4745-5p 1 0 0
chr11:69653805|69654073 hsa-miR-4749-5p 1 0 0
chr11:69653805|69654073 hsa-miR-3198 0 1 0
chr11:69653805|69654073 hsa-miR-6724-5p 1 1 0
chr11:69653805|69654073 hsa-miR-449b-5p 1 0 0
chr11:69653805|69654073 hsa-miR-4781-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:69653805|69654073
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MKPAHSAVCPGHLASCRTKRICTPLRAHVVGAL
Nucleotide Sequence ATGAAGCCAGCTCACAGTGCTGTGTGCCCCGGTCACCTAGCAAGCTGCCGAACCAAAAGAATTTGCACCCCGCTGCGGGCCCACGTGGTTGGGGCCCTG
CircID chr11:69653805|69654073
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MEFVQVLGMFNLLCTSVLFVIVLLITP
Nucleotide Sequence CTGGAATTTGTTCAAGTTTTGGGTATGTTTAATCTGTTATGTACTAGTGTTCTGTTTGTTATTGTTTTGTTAATTACACCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab