CircRNA Information

General Information
circRNA Basic Information
CircID chr11:70470086|70470265
Strand +
CircType exon
Host Gene ENSG00000162105.15;
Algorism CIRI2;
Sequence TGTCTTATTATAGAGAAGTAATAGACCTATCAGAACCTGCACTGACCAACAAATAAACACATGTTGCCAAGATGAATCGGTCTCTATCTCTATCTGCTTATTTTGGTACTGAAAGCAATAGTTCCTCATTCAAATCACCACCCACTGTTCTCCCCCTTTGGGACATGTTAGGACGAGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:70470086|70470265 hsa-miR-148a-5p 0 0 1
chr11:70470086|70470265 hsa-miR-148a-3p 0 0 1
chr11:70470086|70470265 hsa-miR-182-5p 0 0 1
chr11:70470086|70470265 hsa-miR-182-3p 0 0 1
chr11:70470086|70470265 hsa-miR-137-5p 0 0 1
chr11:70470086|70470265 hsa-miR-137-3p 0 0 1
chr11:70470086|70470265 hsa-miR-152-5p 0 0 1
chr11:70470086|70470265 hsa-miR-152-3p 0 0 1
chr11:70470086|70470265 hsa-miR-374a-5p 0 0 1
chr11:70470086|70470265 hsa-miR-374a-3p 0 0 1
chr11:70470086|70470265 hsa-miR-148b-5p 0 0 1
chr11:70470086|70470265 hsa-miR-148b-3p 0 0 1
chr11:70470086|70470265 hsa-miR-641 0 0 1
chr11:70470086|70470265 hsa-miR-657 0 0 1
chr11:70470086|70470265 hsa-miR-374b-5p 0 0 1
chr11:70470086|70470265 hsa-miR-374b-3p 0 0 1
chr11:70470086|70470265 hsa-miR-942-5p 0 0 1
chr11:70470086|70470265 hsa-miR-942-3p 0 0 1
chr11:70470086|70470265 hsa-miR-1293 1 0 1
chr11:70470086|70470265 hsa-miR-369-3p 0 0 1
chr11:70470086|70470265 hsa-miR-608 1 0 0
chr11:70470086|70470265 hsa-miR-765 1 0 0
chr11:70470086|70470265 hsa-miR-3138 1 0 0
chr11:70470086|70470265 hsa-miR-3147 1 0 0
chr11:70470086|70470265 hsa-miR-3154 1 0 0
chr11:70470086|70470265 hsa-miR-3175 1 0 0
chr11:70470086|70470265 hsa-miR-4271 1 0 0
chr11:70470086|70470265 hsa-miR-4483 1 0 0
chr11:70470086|70470265 hsa-miR-4506 1 0 0
chr11:70470086|70470265 hsa-miR-4516 1 0 0
chr11:70470086|70470265 hsa-miR-4706 1 0 0
chr11:70470086|70470265 hsa-miR-4739 1 0 0
chr11:70470086|70470265 hsa-miR-5698 1 0 0
chr11:70470086|70470265 hsa-miR-8062 1 0 0
chr11:70470086|70470265 hsa-miR-8085 1 0 0
chr11:70470086|70470265 hsa-miR-4433b-3p 1 0 0
chr11:70470086|70470265 hsa-miR-6825-5p 1 0 0
chr11:70470086|70470265 hsa-miR-3926 1 0 0
chr11:70470086|70470265 hsa-miR-5187-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6089 1 0 0
chr11:70470086|70470265 hsa-miR-6746-5p 1 0 0
chr11:70470086|70470265 hsa-miR-7154-3p 1 0 0
chr11:70470086|70470265 hsa-miR-6741-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6748-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6793-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6732-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6805-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6798-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6760-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6782-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6786-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6835-5p 1 0 0
chr11:70470086|70470265 hsa-miR-7109-5p 1 0 0
chr11:70470086|70470265 hsa-miR-149-3p 1 0 0
chr11:70470086|70470265 hsa-miR-5010-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6769b-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6870-5p 1 0 0
chr11:70470086|70470265 hsa-miR-1343-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6743-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6756-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6769a-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6788-5p 1 0 0
chr11:70470086|70470265 hsa-miR-7111-5p 1 0 0
chr11:70470086|70470265 hsa-miR-10526-3p 1 0 0
chr11:70470086|70470265 hsa-miR-328-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6738-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6794-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6795-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6887-5p 1 0 0
chr11:70470086|70470265 hsa-miR-4723-5p 1 0 0
chr11:70470086|70470265 hsa-miR-939-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6731-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6750-5p 1 0 0
chr11:70470086|70470265 hsa-miR-6766-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:70470086|70470265
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MLILVLKAIVPHSNHHPLFSPFGTC
Nucleotide Sequence CTGCTTATTTTGGTACTGAAAGCAATAGTTCCTCATTCAAATCACCACCCACTGTTCTCCCCCTTTGGGACATGTTAG
CircID chr11:70470086|70470265
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MNRSLSLSAYFGTESNSSSFKSPPTVLPLWDMLGRG
Nucleotide Sequence ATGAATCGGTCTCTATCTCTATCTGCTTATTTTGGTACTGAAAGCAATAGTTCCTCATTCAAATCACCACCCACTGTTCTCCCCCTTTGGGACATGTTAGGACGAGGC
CircID chr11:70470086|70470265
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MRNYCFQYQNKQIEIETDSSWQHVFICWSVQVLIGLLLLYNKT
Nucleotide Sequence ATGAGGAACTATTGCTTTCAGTACCAAAATAAGCAGATAGAGATAGAGACCGATTCATCTTGGCAACATGTGTTTATTTGTTGGTCAGTGCAGGTTCTGATAGGTCTATTACTTCTCTATAATAAGACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab