CircRNA Information

General Information
circRNA Basic Information
CircID chr11:72001483|72001827
Strand -
CircType exon
Host Gene ENSG00000137496.16;
Algorism CIRI2;
Sequence CAACTTCTCCTGTGTGCTCGTGGACCCTGAACAGGTTGTCCAGCGTCACGTCGTCCTGGCCCAGCTCTGGGTGAGGAGCCCAAGGAGAGGCCTCCAGGAACAGGAGGAGCTCTGCTTCCATATGTGGGGAGGAAAGGGTGGGCTCTGCCAGAGCAGCCTGTGAACTAATGCCCAGCATTCCTCAAGGTCAGCCAGACAAAAAGGAACTTAGGTCTTGGGCAGAGGAGGTGTAGCCTGGGGCAAAGTGATGAGATGTCCCTCCTTTCCTTGGCCTGATCCTTGTCTGCCTTCACTTCCCTAGGCTGGGCTGAGGGCAACCTTGCCCCCCACCCAAGAAGCCCTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:72001483|72001827 hsa-miR-27a-5p 0 0 1
chr11:72001483|72001827 hsa-miR-27a-3p 0 0 1
chr11:72001483|72001827 hsa-miR-27b-5p 0 0 1
chr11:72001483|72001827 hsa-miR-27b-3p 0 0 1
chr11:72001483|72001827 hsa-miR-149-5p 0 0 1
chr11:72001483|72001827 hsa-miR-149-3p 0 0 1
chr11:72001483|72001827 hsa-miR-612 1 1 1
chr11:72001483|72001827 hsa-miR-632 0 0 1
chr11:72001483|72001827 hsa-miR-635 0 0 1
chr11:72001483|72001827 hsa-miR-649 0 1 1
chr11:72001483|72001827 hsa-miR-650 0 0 1
chr11:72001483|72001827 hsa-miR-874-5p 0 0 1
chr11:72001483|72001827 hsa-miR-874-3p 0 0 1
chr11:72001483|72001827 hsa-miR-1231 0 0 1
chr11:72001483|72001827 hsa-miR-1238-5p 0 0 1
chr11:72001483|72001827 hsa-miR-1238-3p 0 0 1
chr11:72001483|72001827 hsa-miR-1293 0 0 1
chr11:72001483|72001827 hsa-miR-1262 0 0 1
chr11:72001483|72001827 hsa-miR-671-5p 0 0 1
chr11:72001483|72001827 hsa-miR-1224-5p 0 0 1
chr11:72001483|72001827 hsa-miR-513a-5p 0 0 1
chr11:72001483|72001827 hsa-miR-1207-5p 1 1 1
chr11:72001483|72001827 hsa-miR-324-3p 0 0 1
chr11:72001483|72001827 hsa-miR-220c 0 0 1
chr11:72001483|72001827 hsa-miR-1285 0 0 1
chr11:72001483|72001827 hsa-miR-637 1 1 0
chr11:72001483|72001827 hsa-miR-663a 1 0 0
chr11:72001483|72001827 hsa-miR-3135a 0 1 0
chr11:72001483|72001827 hsa-miR-3166 0 1 0
chr11:72001483|72001827 hsa-miR-4254 0 1 0
chr11:72001483|72001827 hsa-miR-4268 0 1 0
chr11:72001483|72001827 hsa-miR-3714 0 1 0
chr11:72001483|72001827 hsa-miR-4505 1 1 0
chr11:72001483|72001827 hsa-miR-1587 1 0 0
chr11:72001483|72001827 hsa-miR-4651 1 0 0
chr11:72001483|72001827 hsa-miR-4730 0 1 0
chr11:72001483|72001827 hsa-miR-4739 1 0 0
chr11:72001483|72001827 hsa-miR-5193 0 1 0
chr11:72001483|72001827 hsa-miR-5685 0 1 0
chr11:72001483|72001827 hsa-miR-6072 1 0 0
chr11:72001483|72001827 hsa-miR-6132 1 0 0
chr11:72001483|72001827 hsa-miR-6860 1 0 0
chr11:72001483|72001827 hsa-miR-504-3p 0 1 0
chr11:72001483|72001827 hsa-miR-1972 0 1 0
chr11:72001483|72001827 hsa-miR-6089 1 0 0
chr11:72001483|72001827 hsa-miR-4722-5p 1 0 0
chr11:72001483|72001827 hsa-miR-3064-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6762-3p 1 0 0
chr11:72001483|72001827 hsa-miR-6768-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6829-5p 1 0 0
chr11:72001483|72001827 hsa-miR-23a-5p 1 0 0
chr11:72001483|72001827 hsa-miR-7109-5p 0 1 0
chr11:72001483|72001827 hsa-miR-1226-5p 1 0 0
chr11:72001483|72001827 hsa-miR-7108-3p 1 1 0
chr11:72001483|72001827 hsa-miR-3944-3p 1 0 0
chr11:72001483|72001827 hsa-miR-6784-5p 1 0 0
chr11:72001483|72001827 hsa-miR-4640-5p 0 1 0
chr11:72001483|72001827 hsa-miR-1228-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6823-5p 1 0 0
chr11:72001483|72001827 hsa-miR-7854-3p 0 1 0
chr11:72001483|72001827 hsa-miR-6878-3p 0 1 0
chr11:72001483|72001827 hsa-miR-4638-3p 0 1 0
chr11:72001483|72001827 hsa-miR-1266-3p 0 1 0
chr11:72001483|72001827 hsa-miR-6830-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6824-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6802-5p 1 0 0
chr11:72001483|72001827 hsa-miR-1306-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6828-5p 0 1 0
chr11:72001483|72001827 hsa-miR-339-5p 1 0 0
chr11:72001483|72001827 hsa-miR-660-3p 0 1 0
chr11:72001483|72001827 hsa-miR-381-5p 0 1 0
chr11:72001483|72001827 hsa-miR-744-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6767-5p 1 0 0
chr11:72001483|72001827 hsa-miR-3124-3p 0 1 0
chr11:72001483|72001827 hsa-miR-3670 0 1 0
chr11:72001483|72001827 hsa-miR-5580-3p 0 1 0
chr11:72001483|72001827 hsa-miR-4763-3p 0 1 0
chr11:72001483|72001827 hsa-miR-6775-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6756-5p 1 1 0
chr11:72001483|72001827 hsa-miR-6769a-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6819-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6722-3p 1 0 0
chr11:72001483|72001827 hsa-miR-6779-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6879-5p 1 0 0
chr11:72001483|72001827 hsa-miR-320a-5p 1 0 0
chr11:72001483|72001827 hsa-miR-3620-5p 1 0 0
chr11:72001483|72001827 hsa-miR-4728-5p 1 0 0
chr11:72001483|72001827 hsa-miR-5189-5p 1 0 0
chr11:72001483|72001827 hsa-miR-5196-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6780b-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6836-5p 1 0 0
chr11:72001483|72001827 hsa-miR-328-5p 0 1 0
chr11:72001483|72001827 hsa-miR-4649-5p 1 0 0
chr11:72001483|72001827 hsa-miR-4685-5p 1 1 0
chr11:72001483|72001827 hsa-miR-4726-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6777-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6858-5p 1 0 0
chr11:72001483|72001827 hsa-miR-3187-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6885-5p 1 0 0
chr11:72001483|72001827 hsa-miR-1910-3p 0 1 0
chr11:72001483|72001827 hsa-miR-6511a-5p 0 1 0
chr11:72001483|72001827 hsa-miR-377-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6891-5p 0 1 0
chr11:72001483|72001827 hsa-miR-4472 0 1 0
chr11:72001483|72001827 hsa-miR-4667-5p 0 1 0
chr11:72001483|72001827 hsa-miR-6791-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6862-3p 0 1 0
chr11:72001483|72001827 hsa-miR-6805-3p 0 1 0
chr11:72001483|72001827 hsa-miR-10400-3p 0 1 0
chr11:72001483|72001827 hsa-miR-4723-3p 1 1 0
chr11:72001483|72001827 hsa-miR-6511b-3p 1 0 0
chr11:72001483|72001827 hsa-miR-4756-5p 1 0 0
chr11:72001483|72001827 hsa-miR-6744-3p 0 1 0
chr11:72001483|72001827 hsa-miR-1295b-5p 0 1 0
chr11:72001483|72001827 hsa-miR-4690-3p 0 1 0
chr11:72001483|72001827 hsa-miR-6504-5p 0 1 0
chr11:72001483|72001827 hsa-miR-7155-3p 0 1 0
chr11:72001483|72001827 hsa-miR-1912-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:72001483|72001827
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGEEPKERPPGTGGALLPYVGRKGWALPEQPVN
Nucleotide Sequence CTGGGTGAGGAGCCCAAGGAGAGGCCTCCAGGAACAGGAGGAGCTCTGCTTCCATATGTGGGGAGGAAAGGGTGGGCTCTGCCAGAGCAGCCTGTGAACTAA
CircID chr11:72001483|72001827
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MAQLWVRSPRRGLQEQEELCFHMWGGKGGLCQSSL
Nucleotide Sequence CTGGCCCAGCTCTGGGTGAGGAGCCCAAGGAGAGGCCTCCAGGAACAGGAGGAGCTCTGCTTCCATATGTGGGGAGGAAAGGGTGGGCTCTGCCAGAGCAGCCTGTGA
CircID chr11:72001483|72001827
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MGRGGVAWGKVMRCPSFPWPDPCLPSLP
Nucleotide Sequence TTGGGCAGAGGAGGTGTAGCCTGGGGCAAAGTGATGAGATGTCCCTCCTTTCCTTGGCCTGATCCTTGTCTGCCTTCACTTCCCTAG
CircID chr11:72001483|72001827
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MADLEECWALVHRLLWQSPPFPPHIWKQSSSCSWRPLLGLLTQSWARTT
Nucleotide Sequence CTGGCTGACCTTGAGGAATGCTGGGCATTAGTTCACAGGCTGCTCTGGCAGAGCCCACCCTTTCCTCCCCACATATGGAAGCAGAGCTCCTCCTGTTCCTGGAGGCCTCTCCTTGGGCTCCTCACCCAGAGCTGGGCCAGGACGACGTGA
CircID chr11:72001483|72001827
ORF Type ORF5
Protein Length 50
Nucleotide Length 153
Protein Sequence MPSAQPREVKADKDQAKERRDISSLCPRLHLLCPRPKFLFVWLTLRNAGH
Nucleotide Sequence TTGCCCTCAGCCCAGCCTAGGGAAGTGAAGGCAGACAAGGATCAGGCCAAGGAAAGGAGGGACATCTCATCACTTTGCCCCAGGCTACACCTCCTCTGCCCAAGACCTAAGTTCCTTTTTGTCTGGCTGACCTTGAGGAATGCTGGGCATTAG
CircID chr11:72001483|72001827
ORF Type ORF6
Protein Length 27
Nucleotide Length 81
Protein Sequence MGSSPRAGPGRRDAGQPVQGPRAHRRS
Nucleotide Sequence TTGGGCTCCTCACCCAGAGCTGGGCCAGGACGACGTGACGCTGGACAACCTGTTCAGGGTCCACGAGCACACAGGAGAAGT
CircID chr11:72001483|72001827
ORF Type ORF7
Protein Length 59
Nucleotide Length 177
Protein Sequence MLGISSQAALAEPTLSSPHMEAELLLFLEASPWAPHPELGQDDVTLDNLFRVHEHTGEV
Nucleotide Sequence ATGCTGGGCATTAGTTCACAGGCTGCTCTGGCAGAGCCCACCCTTTCCTCCCCACATATGGAAGCAGAGCTCCTCCTGTTCCTGGAGGCCTCTCCTTGGGCTCCTCACCCAGAGCTGGGCCAGGACGACGTGACGCTGGACAACCTGTTCAGGGTCCACGAGCACACAGGAGAAGTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab