CircRNA Information

General Information
circRNA Basic Information
CircID chr11:72001570|72001736
Strand +
CircType exon
Host Gene ENSG00000137496.16;
Algorism CIRI2;
Sequence ATCTCATCACTTTGCCCCAGGCTACACCTCCTCTGCCCAAGACCTAAGTTCCTTTTTGTCTGGCTGACCTTGAGGAATGCTGGGCATTAGTTCACAGGCTGCTCTGGCAGAGCCCACCCTTTCCTCCCCACATATGGAAGCAGAGCTCCTCCTGTTCCTGGAGGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:72001570|72001736 hsa-miR-520g-5p 0 0 1
chr11:72001570|72001736 hsa-miR-520g-3p 0 0 1
chr11:72001570|72001736 hsa-miR-520h 0 0 1
chr11:72001570|72001736 hsa-miR-587 0 1 1
chr11:72001570|72001736 hsa-miR-596 1 0 1
chr11:72001570|72001736 hsa-miR-635 0 0 1
chr11:72001570|72001736 hsa-miR-661 0 0 1
chr11:72001570|72001736 hsa-miR-765 0 0 1
chr11:72001570|72001736 hsa-miR-541-5p 0 0 1
chr11:72001570|72001736 hsa-miR-541-3p 0 0 1
chr11:72001570|72001736 hsa-miR-708-5p 0 0 1
chr11:72001570|72001736 hsa-miR-708-3p 0 0 1
chr11:72001570|72001736 hsa-miR-665 0 0 1
chr11:72001570|72001736 hsa-miR-873-5p 0 0 1
chr11:72001570|72001736 hsa-miR-873-3p 0 0 1
chr11:72001570|72001736 hsa-miR-760 1 0 1
chr11:72001570|72001736 hsa-miR-939-5p 0 0 1
chr11:72001570|72001736 hsa-miR-939-3p 0 0 1
chr11:72001570|72001736 hsa-miR-1179 0 1 1
chr11:72001570|72001736 hsa-miR-491-5p 0 0 1
chr11:72001570|72001736 hsa-miR-486-3p 0 0 1
chr11:72001570|72001736 hsa-miR-299-3p 0 1 1
chr11:72001570|72001736 hsa-miR-654-5p 0 1 1
chr11:72001570|72001736 hsa-miR-28-5p 0 1 1
chr11:72001570|72001736 hsa-miR-338-3p 0 0 1
chr11:72001570|72001736 hsa-miR-516a-3p 0 0 1
chr11:72001570|72001736 hsa-miR-365 0 0 1
chr11:72001570|72001736 hsa-miR-608 1 0 0
chr11:72001570|72001736 hsa-miR-762 1 0 0
chr11:72001570|72001736 hsa-miR-1182 1 0 0
chr11:72001570|72001736 hsa-miR-2278 0 1 0
chr11:72001570|72001736 hsa-miR-3132 1 0 0
chr11:72001570|72001736 hsa-miR-3137 1 1 0
chr11:72001570|72001736 hsa-miR-3147 1 1 0
chr11:72001570|72001736 hsa-miR-4298 1 0 0
chr11:72001570|72001736 hsa-miR-4271 1 0 0
chr11:72001570|72001736 hsa-miR-3609 0 1 0
chr11:72001570|72001736 hsa-miR-4442 0 1 0
chr11:72001570|72001736 hsa-miR-3689c 1 0 0
chr11:72001570|72001736 hsa-miR-4651 1 0 0
chr11:72001570|72001736 hsa-miR-4656 1 0 0
chr11:72001570|72001736 hsa-miR-4674 0 1 0
chr11:72001570|72001736 hsa-miR-4706 1 1 0
chr11:72001570|72001736 hsa-miR-4739 1 0 0
chr11:72001570|72001736 hsa-miR-5681a 0 1 0
chr11:72001570|72001736 hsa-miR-5787 1 0 0
chr11:72001570|72001736 hsa-miR-6090 1 0 0
chr11:72001570|72001736 hsa-miR-6860 1 0 0
chr11:72001570|72001736 hsa-miR-12120 1 1 0
chr11:72001570|72001736 hsa-miR-6734-5p 1 0 0
chr11:72001570|72001736 hsa-miR-7155-5p 1 0 0
chr11:72001570|72001736 hsa-miR-3194-3p 1 1 0
chr11:72001570|72001736 hsa-miR-3157-5p 0 1 0
chr11:72001570|72001736 hsa-miR-6747-5p 1 0 0
chr11:72001570|72001736 hsa-miR-7106-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6825-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6894-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6857-5p 1 0 0
chr11:72001570|72001736 hsa-miR-27a-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6799-5p 1 0 0
chr11:72001570|72001736 hsa-miR-766-5p 0 1 0
chr11:72001570|72001736 hsa-miR-4722-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6759-5p 1 0 0
chr11:72001570|72001736 hsa-miR-197-5p 1 0 0
chr11:72001570|72001736 hsa-miR-7108-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6742-5p 1 0 0
chr11:72001570|72001736 hsa-miR-3151-5p 0 1 0
chr11:72001570|72001736 hsa-miR-3180-3p 1 0 0
chr11:72001570|72001736 hsa-miR-6748-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6772-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6796-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6732-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6805-5p 1 0 0
chr11:72001570|72001736 hsa-miR-2467-3p 0 1 0
chr11:72001570|72001736 hsa-miR-5006-5p 1 1 0
chr11:72001570|72001736 hsa-miR-7109-5p 1 0 0
chr11:72001570|72001736 hsa-miR-1229-5p 1 0 0
chr11:72001570|72001736 hsa-miR-885-3p 1 0 0
chr11:72001570|72001736 hsa-miR-1228-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6771-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6847-5p 0 1 0
chr11:72001570|72001736 hsa-miR-6501-5p 1 0 0
chr11:72001570|72001736 hsa-miR-4787-5p 1 0 0
chr11:72001570|72001736 hsa-miR-149-3p 1 1 0
chr11:72001570|72001736 hsa-miR-6811-3p 0 1 0
chr11:72001570|72001736 hsa-miR-4742-5p 0 1 0
chr11:72001570|72001736 hsa-miR-670-3p 0 1 0
chr11:72001570|72001736 hsa-miR-4750-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6501-3p 0 1 0
chr11:72001570|72001736 hsa-miR-1233-5p 1 0 0
chr11:72001570|72001736 hsa-miR-3689b-3p 1 0 0
chr11:72001570|72001736 hsa-miR-4763-3p 1 0 0
chr11:72001570|72001736 hsa-miR-1343-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6752-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6756-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6803-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6819-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6851-5p 1 1 0
chr11:72001570|72001736 hsa-miR-7107-5p 1 0 0
chr11:72001570|72001736 hsa-miR-7110-5p 1 0 0
chr11:72001570|72001736 hsa-miR-10401-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6722-3p 1 0 0
chr11:72001570|72001736 hsa-miR-6751-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6763-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6774-5p 1 1 0
chr11:72001570|72001736 hsa-miR-6779-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6797-5p 1 0 0
chr11:72001570|72001736 hsa-miR-7111-5p 1 0 0
chr11:72001570|72001736 hsa-miR-4728-5p 1 0 0
chr11:72001570|72001736 hsa-miR-328-5p 1 0 0
chr11:72001570|72001736 hsa-miR-4632-5p 0 1 0
chr11:72001570|72001736 hsa-miR-4745-5p 1 0 0
chr11:72001570|72001736 hsa-miR-6858-5p 1 0 0
chr11:72001570|72001736 hsa-miR-3187-5p 1 0 0
chr11:72001570|72001736 hsa-miR-4758-5p 1 0 0
chr11:72001570|72001736 hsa-miR-3689d 0 1 0
chr11:72001570|72001736 hsa-miR-10400-3p 0 1 0
chr11:72001570|72001736 hsa-miR-7157-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:72001570|72001736
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MLGISSQAALAEPTLSSPHMEAELLLFLEA
Nucleotide Sequence ATGCTGGGCATTAGTTCACAGGCTGCTCTGGCAGAGCCCACCCTTTCCTCCCCACATATGGAAGCAGAGCTCCTCCTGTTCCTGGAGGCC
CircID chr11:72001570|72001736
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MADLEECWALVHRLLWQSPPFPPHIWKQSSSCSWRP
Nucleotide Sequence CTGGCTGACCTTGAGGAATGCTGGGCATTAGTTCACAGGCTGCTCTGGCAGAGCCCACCCTTTCCTCCCCACATATGGAAGCAGAGCTCCTCCTGTTCCTGGAGGCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab