CircRNA Information

General Information
circRNA Basic Information
CircID chr11:72003017|72003272
Strand -
CircType exon
Host Gene ENSG00000137496.16;
Algorism CIRI2;
Sequence CCCACTCCTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGATGGAGAAGTGACTTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:72003017|72003272 hsa-miR-214-5p 0 0 1
chr11:72003017|72003272 hsa-miR-214-3p 0 0 1
chr11:72003017|72003272 hsa-miR-224-5p 0 0 1
chr11:72003017|72003272 hsa-miR-224-3p 0 0 1
chr11:72003017|72003272 hsa-miR-136-5p 0 0 1
chr11:72003017|72003272 hsa-miR-136-3p 0 0 1
chr11:72003017|72003272 hsa-miR-184 0 0 1
chr11:72003017|72003272 hsa-miR-370-5p 0 0 1
chr11:72003017|72003272 hsa-miR-370-3p 0 0 1
chr11:72003017|72003272 hsa-miR-573 0 0 1
chr11:72003017|72003272 hsa-miR-626 0 0 1
chr11:72003017|72003272 hsa-miR-631 0 0 1
chr11:72003017|72003272 hsa-miR-635 0 0 1
chr11:72003017|72003272 hsa-miR-541-5p 0 0 1
chr11:72003017|72003272 hsa-miR-541-3p 0 0 1
chr11:72003017|72003272 hsa-miR-665 0 0 1
chr11:72003017|72003272 hsa-miR-920 0 0 1
chr11:72003017|72003272 hsa-miR-1291 0 1 1
chr11:72003017|72003272 hsa-miR-1304-5p 0 0 1
chr11:72003017|72003272 hsa-miR-1304-3p 0 0 1
chr11:72003017|72003272 hsa-miR-1266-5p 0 0 1
chr11:72003017|72003272 hsa-miR-1266-3p 0 0 1
chr11:72003017|72003272 hsa-miR-296-5p 0 0 1
chr11:72003017|72003272 hsa-miR-485-5p 0 1 1
chr11:72003017|72003272 hsa-miR-193a-5p 0 0 1
chr11:72003017|72003272 hsa-miR-654-5p 0 0 1
chr11:72003017|72003272 hsa-miR-654-3p 0 0 1
chr11:72003017|72003272 hsa-miR-515-5p 0 0 1
chr11:72003017|72003272 hsa-miR-638 1 0 0
chr11:72003017|72003272 hsa-miR-762 1 1 0
chr11:72003017|72003272 hsa-miR-760 1 0 0
chr11:72003017|72003272 hsa-miR-1538 1 1 0
chr11:72003017|72003272 hsa-miR-2861 0 1 0
chr11:72003017|72003272 hsa-miR-3154 0 1 0
chr11:72003017|72003272 hsa-miR-3169 0 1 0
chr11:72003017|72003272 hsa-miR-4309 0 1 0
chr11:72003017|72003272 hsa-miR-4256 0 1 0
chr11:72003017|72003272 hsa-miR-4456 0 1 0
chr11:72003017|72003272 hsa-miR-4505 0 1 0
chr11:72003017|72003272 hsa-miR-4635 0 1 0
chr11:72003017|72003272 hsa-miR-4748 0 1 0
chr11:72003017|72003272 hsa-miR-5787 0 1 0
chr11:72003017|72003272 hsa-miR-29b-1-5p 0 1 0
chr11:72003017|72003272 hsa-miR-4433b-3p 0 1 0
chr11:72003017|72003272 hsa-miR-6734-5p 1 0 0
chr11:72003017|72003272 hsa-miR-504-3p 1 0 0
chr11:72003017|72003272 hsa-miR-4433a-3p 1 1 0
chr11:72003017|72003272 hsa-miR-593-5p 1 0 0
chr11:72003017|72003272 hsa-miR-6842-3p 0 1 0
chr11:72003017|72003272 hsa-miR-6806-5p 1 0 0
chr11:72003017|72003272 hsa-miR-5589-5p 0 1 0
chr11:72003017|72003272 hsa-miR-7845-5p 1 0 0
chr11:72003017|72003272 hsa-miR-185-3p 1 0 0
chr11:72003017|72003272 hsa-miR-889-5p 0 1 0
chr11:72003017|72003272 hsa-miR-6749-5p 1 0 0
chr11:72003017|72003272 hsa-miR-4446-3p 0 1 0
chr11:72003017|72003272 hsa-miR-6892-5p 1 1 0
chr11:72003017|72003272 hsa-miR-3189-3p 0 1 0
chr11:72003017|72003272 hsa-miR-3190-5p 0 1 0
chr11:72003017|72003272 hsa-miR-887-5p 0 1 0
chr11:72003017|72003272 hsa-miR-525-5p 0 1 0
chr11:72003017|72003272 hsa-miR-3619-3p 1 0 0
chr11:72003017|72003272 hsa-miR-6804-3p 0 1 0
chr11:72003017|72003272 hsa-miR-3074-5p 0 1 0
chr11:72003017|72003272 hsa-miR-130b-5p 0 1 0
chr11:72003017|72003272 hsa-miR-520g-5p 0 1 0
chr11:72003017|72003272 hsa-miR-3664-3p 0 1 0
chr11:72003017|72003272 hsa-miR-1233-5p 0 1 0
chr11:72003017|72003272 hsa-miR-4763-3p 1 0 0
chr11:72003017|72003272 hsa-miR-5001-5p 0 1 0
chr11:72003017|72003272 hsa-miR-1249-5p 1 0 0
chr11:72003017|72003272 hsa-miR-3620-5p 1 0 0
chr11:72003017|72003272 hsa-miR-1909-3p 0 1 0
chr11:72003017|72003272 hsa-miR-4685-5p 1 0 0
chr11:72003017|72003272 hsa-miR-6777-5p 1 0 0
chr11:72003017|72003272 hsa-miR-6848-5p 1 0 0
chr11:72003017|72003272 hsa-miR-6773-5p 0 1 0
chr11:72003017|72003272 hsa-miR-6724-5p 1 1 0
chr11:72003017|72003272 hsa-miR-6791-5p 1 0 0
chr11:72003017|72003272 hsa-miR-6762-5p 1 0 0
chr11:72003017|72003272 hsa-miR-6775-3p 0 1 0
chr11:72003017|72003272 hsa-miR-3059-5p 0 1 0
chr11:72003017|72003272 hsa-miR-498-3p 0 1 0
chr11:72003017|72003272 hsa-miR-4782-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:72003017|72003272
ORF Type ORF1
Protein Length 69
Nucleotide Length 210
Protein Sequence MGKSILWQVLPPGQTQSWTSRVRAPAGPSHQDSRNQGLLLLWSLLDPEAKRKTGQAQGPSHQNQPQIWL
Nucleotide Sequence CTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAAGAGGAAGACTGGCCAGGCCCAAGGACCCAGCCATCAAAACCAGCCTCAAATCTGGTTGTGA
CircID chr11:72003017|72003272
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MRHRAHPSWERASSGRCSHQVRPSPGLQE
Nucleotide Sequence CTGAGACATAGGGCCCATCCGTCCTGGGAAAGAGCATCCTCTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCTGGACTTCAAGAGTGA
CircID chr11:72003017|72003272
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MAGAPTRSDPVLDFKSEGPCWAQPPGQQEPGPTPLMVPSRSRG
Nucleotide Sequence CTGGCAGGTGCTCCCACCAGGTCAGACCCAGTCCTGGACTTCAAGAGTGAGGGCCCCTGCTGGGCCCAGCCACCAGGACAGCAGGAACCAGGGCCTACTCCTCTTATGGTCCCTTCTAGATCCAGAGGCTAA
CircID chr11:72003017|72003272
ORF Type ORF4
Protein Length 57
Nucleotide Length 171
Protein Sequence MDLEGTIRGVGPGSCCPGGWAQQGPSLLKSRTGSDLVGAPARGCSFPGRMGPMSQEW
Nucleotide Sequence CTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGG
CircID chr11:72003017|72003272
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MGLTWWEHLPEDALSQDGWALCLRSG
Nucleotide Sequence CTGGGTCTGACCTGGTGGGAGCACCTGCCAGAGGATGCTCTTTCCCAGGACGGATGGGCCCTATGTCTCAGGAGTGGG
CircID chr11:72003017|72003272
ORF Type ORF6
Protein Length 46
Nucleotide Length 141
Protein Sequence MGPWAWPVFLLASGSRRDHKRSRPWFLLSWWLGPAGALTLEVQDWV
Nucleotide Sequence CTGGGTCCTTGGGCCTGGCCAGTCTTCCTCTTAGCCTCTGGATCTAGAAGGGACCATAAGAGGAGTAGGCCCTGGTTCCTGCTGTCCTGGTGGCTGGGCCCAGCAGGGGCCCTCACTCTTGAAGTCCAGGACTGGGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab