CircRNA Information

General Information
circRNA Basic Information
CircID chr11:72576385|72576517
Strand +
CircType exon
Host Gene ENSG00000186642.14;
Algorism CIRI2;
Sequence AGAGAGCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTGAGAGACCTGGCCTCAGCCCTGGCAGGGCTCTCTCTTCAAGGCCATATCCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:72576385|72576517 hsa-miR-510-5p 0 0 1
chr11:72576385|72576517 hsa-miR-510-3p 0 0 1
chr11:72576385|72576517 hsa-miR-555 0 0 1
chr11:72576385|72576517 hsa-miR-604 0 0 1
chr11:72576385|72576517 hsa-miR-647 0 0 1
chr11:72576385|72576517 hsa-miR-892b 0 0 1
chr11:72576385|72576517 hsa-miR-1205 0 0 1
chr11:72576385|72576517 hsa-miR-1286 0 0 1
chr11:72576385|72576517 hsa-miR-1266-5p 0 0 1
chr11:72576385|72576517 hsa-miR-1266-3p 0 0 1
chr11:72576385|72576517 hsa-miR-296-3p 1 0 1
chr11:72576385|72576517 hsa-miR-1233 0 0 1
chr11:72576385|72576517 hsa-miR-24 0 0 1
chr11:72576385|72576517 hsa-miR-637 1 0 0
chr11:72576385|72576517 hsa-miR-762 1 0 0
chr11:72576385|72576517 hsa-miR-1183 1 0 0
chr11:72576385|72576517 hsa-miR-3170 1 0 0
chr11:72576385|72576517 hsa-miR-3945 1 0 0
chr11:72576385|72576517 hsa-miR-4437 1 0 0
chr11:72576385|72576517 hsa-miR-4507 1 0 0
chr11:72576385|72576517 hsa-miR-4656 1 0 0
chr11:72576385|72576517 hsa-miR-4721 1 0 0
chr11:72576385|72576517 hsa-miR-4734 1 0 0
chr11:72576385|72576517 hsa-miR-5787 1 0 0
chr11:72576385|72576517 hsa-miR-6085 1 0 0
chr11:72576385|72576517 hsa-miR-6132 1 0 0
chr11:72576385|72576517 hsa-miR-4433b-3p 1 0 0
chr11:72576385|72576517 hsa-miR-6734-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4433a-3p 1 0 0
chr11:72576385|72576517 hsa-miR-1972 1 0 0
chr11:72576385|72576517 hsa-miR-4687-3p 1 0 0
chr11:72576385|72576517 hsa-miR-27a-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6728-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6089 1 0 0
chr11:72576385|72576517 hsa-miR-6757-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4722-5p 1 0 0
chr11:72576385|72576517 hsa-miR-24-3p 1 0 0
chr11:72576385|72576517 hsa-miR-6806-5p 1 0 0
chr11:72576385|72576517 hsa-miR-200b-5p 1 0 0
chr11:72576385|72576517 hsa-miR-197-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6776-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6716-5p 1 0 0
chr11:72576385|72576517 hsa-miR-423-3p 1 0 0
chr11:72576385|72576517 hsa-miR-1292-5p 1 0 0
chr11:72576385|72576517 hsa-miR-185-3p 1 0 0
chr11:72576385|72576517 hsa-miR-6829-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6805-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6798-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6881-5p 1 0 0
chr11:72576385|72576517 hsa-miR-5088-5p 1 0 0
chr11:72576385|72576517 hsa-miR-1229-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6784-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4640-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6823-5p 1 0 0
chr11:72576385|72576517 hsa-miR-3648 1 0 0
chr11:72576385|72576517 hsa-miR-1225-5p 1 0 0
chr11:72576385|72576517 hsa-miR-744-5p 1 0 0
chr11:72576385|72576517 hsa-miR-2277-5p 1 0 0
chr11:72576385|72576517 hsa-miR-10400-5p 1 0 0
chr11:72576385|72576517 hsa-miR-1207-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4763-3p 1 0 0
chr11:72576385|72576517 hsa-miR-1343-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6743-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6752-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6813-5p 1 0 0
chr11:72576385|72576517 hsa-miR-7111-5p 1 0 0
chr11:72576385|72576517 hsa-miR-5196-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6780b-5p 1 0 0
chr11:72576385|72576517 hsa-miR-10396a-5p 1 0 0
chr11:72576385|72576517 hsa-miR-1909-3p 1 0 0
chr11:72576385|72576517 hsa-miR-328-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4649-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4685-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4701-3p 1 0 0
chr11:72576385|72576517 hsa-miR-4725-3p 1 0 0
chr11:72576385|72576517 hsa-miR-4745-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6729-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6794-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6846-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6848-5p 1 0 0
chr11:72576385|72576517 hsa-miR-939-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4758-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6511b-5p 1 0 0
chr11:72576385|72576517 hsa-miR-3940-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6736-5p 1 0 0
chr11:72576385|72576517 hsa-miR-7151-3p 1 0 0
chr11:72576385|72576517 hsa-miR-3184-5p 1 0 0
chr11:72576385|72576517 hsa-miR-4757-5p 1 0 0
chr11:72576385|72576517 hsa-miR-6801-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr11:72576385|72576517
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MSVPLGLSPLPIPAASERPGLSPGRALSSRPYP
Nucleotide Sequence CTGAGTGTTCCCCTTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTGAGAGACCTGGCCTCAGCCCTGGCAGGGCTCTCTCTTCAAGGCCATATCCA
CircID chr11:72576385|72576517
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MPGLRPGLSLAAGMGKGLRPRGTLRGPLRHSGLGS
Nucleotide Sequence CTGCCAGGGCTGAGGCCAGGTCTCTCACTGGCTGCAGGAATGGGTAAGGGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab