CircRNA Information

General Information
circRNA Basic Information
CircID chr11:73357690|73357975
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence AGGGAACAGACACTCGCTTGAGTTACTGCAAGCAAAGGGTTGATTGGAGCCATCCATGTTGTTCAGGGCTGAGACTGTTGGGAGCTGAGGCAGCTTCCAGGAGCCGCTCCTCCTGCGGCGTCTGTCTTTCTTCCCTTCTTGCTGAGTCTGCCCTGTTCTCACTGCTGTTAGCTTTCCCTGCTTCCTCATAACTCCCGTGATCAGACCCAGGCTGGCTCCTGGCTCAGCTGGAGGGGAGCTCACCTGGAGCTTGGCCCTCAGGGTAACAGACAGGTTTGCTCGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:73357690|73357975 hsa-miR-22-5p 0 0 1
chr11:73357690|73357975 hsa-miR-22-3p 0 0 1
chr11:73357690|73357975 hsa-miR-10a-5p 0 0 1
chr11:73357690|73357975 hsa-miR-10a-3p 0 0 1
chr11:73357690|73357975 hsa-miR-10b-5p 0 0 1
chr11:73357690|73357975 hsa-miR-10b-3p 0 0 1
chr11:73357690|73357975 hsa-miR-212-5p 0 0 1
chr11:73357690|73357975 hsa-miR-212-3p 0 0 1
chr11:73357690|73357975 hsa-miR-132-5p 0 0 1
chr11:73357690|73357975 hsa-miR-132-3p 0 0 1
chr11:73357690|73357975 hsa-miR-146a-5p 0 0 1
chr11:73357690|73357975 hsa-miR-146a-3p 0 0 1
chr11:73357690|73357975 hsa-miR-150-5p 0 0 1
chr11:73357690|73357975 hsa-miR-150-3p 0 0 1
chr11:73357690|73357975 hsa-miR-545-5p 0 0 1
chr11:73357690|73357975 hsa-miR-545-3p 0 0 1
chr11:73357690|73357975 hsa-miR-589-5p 0 0 1
chr11:73357690|73357975 hsa-miR-589-3p 0 0 1
chr11:73357690|73357975 hsa-miR-649 0 1 1
chr11:73357690|73357975 hsa-miR-661 1 1 1
chr11:73357690|73357975 hsa-miR-766-5p 0 0 1
chr11:73357690|73357975 hsa-miR-766-3p 0 0 1
chr11:73357690|73357975 hsa-miR-765 0 0 1
chr11:73357690|73357975 hsa-miR-665 0 0 1
chr11:73357690|73357975 hsa-miR-512-5p 1 1 1
chr11:73357690|73357975 hsa-miR-671-5p 0 0 1
chr11:73357690|73357975 hsa-miR-125a-3p 0 1 1
chr11:73357690|73357975 hsa-miR-193a-5p 1 0 1
chr11:73357690|73357975 hsa-miR-490-5p 0 1 1
chr11:73357690|73357975 hsa-miR-125a-5p 0 0 1
chr11:73357690|73357975 hsa-miR-146b-5p 0 0 1
chr11:73357690|73357975 hsa-miR-125b 0 0 1
chr11:73357690|73357975 hsa-miR-761 0 1 0
chr11:73357690|73357975 hsa-miR-3125 1 0 0
chr11:73357690|73357975 hsa-miR-3132 1 0 0
chr11:73357690|73357975 hsa-miR-3141 1 0 0
chr11:73357690|73357975 hsa-miR-3153 0 1 0
chr11:73357690|73357975 hsa-miR-3154 1 1 0
chr11:73357690|73357975 hsa-miR-3155a 1 0 0
chr11:73357690|73357975 hsa-miR-3916 1 0 0
chr11:73357690|73357975 hsa-miR-4421 0 1 0
chr11:73357690|73357975 hsa-miR-4510 1 0 0
chr11:73357690|73357975 hsa-miR-4519 0 1 0
chr11:73357690|73357975 hsa-miR-4526 1 0 0
chr11:73357690|73357975 hsa-miR-4689 1 0 0
chr11:73357690|73357975 hsa-miR-4706 1 0 0
chr11:73357690|73357975 hsa-miR-4739 1 0 0
chr11:73357690|73357975 hsa-miR-4785 1 0 0
chr11:73357690|73357975 hsa-miR-5090 1 0 0
chr11:73357690|73357975 hsa-miR-5698 1 0 0
chr11:73357690|73357975 hsa-miR-6079 0 1 0
chr11:73357690|73357975 hsa-miR-6125 1 0 0
chr11:73357690|73357975 hsa-miR-6127 1 0 0
chr11:73357690|73357975 hsa-miR-6131 1 0 0
chr11:73357690|73357975 hsa-miR-6133 1 0 0
chr11:73357690|73357975 hsa-miR-6165 1 0 0
chr11:73357690|73357975 hsa-miR-6860 1 0 0
chr11:73357690|73357975 hsa-miR-7515 0 1 0
chr11:73357690|73357975 hsa-miR-12115 1 0 0
chr11:73357690|73357975 hsa-miR-432-3p 1 1 0
chr11:73357690|73357975 hsa-miR-6765-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6861-5p 1 0 0
chr11:73357690|73357975 hsa-miR-7106-5p 0 1 0
chr11:73357690|73357975 hsa-miR-6510-5p 0 1 0
chr11:73357690|73357975 hsa-miR-6089 1 0 0
chr11:73357690|73357975 hsa-miR-4695-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6746-5p 1 0 0
chr11:73357690|73357975 hsa-miR-4653-3p 0 1 0
chr11:73357690|73357975 hsa-miR-4722-5p 0 1 0
chr11:73357690|73357975 hsa-miR-505-5p 0 1 0
chr11:73357690|73357975 hsa-miR-4755-3p 1 0 0
chr11:73357690|73357975 hsa-miR-6727-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6721-5p 1 0 0
chr11:73357690|73357975 hsa-miR-197-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6849-3p 0 1 0
chr11:73357690|73357975 hsa-miR-6787-3p 0 1 0
chr11:73357690|73357975 hsa-miR-6871-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6827-5p 1 1 0
chr11:73357690|73357975 hsa-miR-486-3p 1 0 0
chr11:73357690|73357975 hsa-miR-6760-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6882-3p 0 1 0
chr11:73357690|73357975 hsa-miR-345-3p 0 1 0
chr11:73357690|73357975 hsa-miR-6858-3p 0 1 0
chr11:73357690|73357975 hsa-miR-1226-5p 0 1 0
chr11:73357690|73357975 hsa-miR-4786-3p 1 0 0
chr11:73357690|73357975 hsa-miR-4640-5p 1 1 0
chr11:73357690|73357975 hsa-miR-6753-5p 1 0 0
chr11:73357690|73357975 hsa-miR-885-3p 1 0 0
chr11:73357690|73357975 hsa-miR-4690-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6516-5p 0 1 0
chr11:73357690|73357975 hsa-miR-6749-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6736-3p 0 1 0
chr11:73357690|73357975 hsa-miR-6824-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6878-5p 0 1 0
chr11:73357690|73357975 hsa-miR-6864-5p 1 0 0
chr11:73357690|73357975 hsa-miR-3189-3p 1 0 0
chr11:73357690|73357975 hsa-miR-6895-5p 0 1 0
chr11:73357690|73357975 hsa-miR-3120-3p 1 0 0
chr11:73357690|73357975 hsa-miR-3120-5p 0 1 0
chr11:73357690|73357975 hsa-miR-4773 1 1 0
chr11:73357690|73357975 hsa-miR-214-3p 1 0 0
chr11:73357690|73357975 hsa-miR-483-5p 1 0 0
chr11:73357690|73357975 hsa-miR-5004-5p 1 1 0
chr11:73357690|73357975 hsa-miR-4802-3p 1 1 0
chr11:73357690|73357975 hsa-miR-1207-5p 1 0 0
chr11:73357690|73357975 hsa-miR-4763-3p 1 0 0
chr11:73357690|73357975 hsa-miR-6775-5p 1 0 0
chr11:73357690|73357975 hsa-miR-1343-5p 0 1 0
chr11:73357690|73357975 hsa-miR-6743-5p 1 0 0
chr11:73357690|73357975 hsa-miR-7107-5p 1 0 0
chr11:73357690|73357975 hsa-miR-1249-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6722-3p 1 0 0
chr11:73357690|73357975 hsa-miR-6797-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6808-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6879-5p 1 1 0
chr11:73357690|73357975 hsa-miR-6780b-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6836-5p 1 0 0
chr11:73357690|73357975 hsa-miR-449c-5p 1 0 0
chr11:73357690|73357975 hsa-miR-4632-5p 1 0 0
chr11:73357690|73357975 hsa-miR-4725-3p 1 0 0
chr11:73357690|73357975 hsa-miR-4726-5p 1 1 0
chr11:73357690|73357975 hsa-miR-4749-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6735-5p 0 1 0
chr11:73357690|73357975 hsa-miR-6795-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6858-5p 1 0 0
chr11:73357690|73357975 hsa-miR-3187-5p 1 0 0
chr11:73357690|73357975 hsa-miR-4436b-3p 0 1 0
chr11:73357690|73357975 hsa-miR-6731-5p 1 0 0
chr11:73357690|73357975 hsa-miR-1199-5p 0 1 0
chr11:73357690|73357975 hsa-miR-7843-5p 1 1 0
chr11:73357690|73357975 hsa-miR-3116 1 0 0
chr11:73357690|73357975 hsa-miR-3173-3p 0 1 0
chr11:73357690|73357975 hsa-miR-6750-5p 1 0 0
chr11:73357690|73357975 hsa-miR-6724-5p 1 0 0
chr11:73357690|73357975 hsa-miR-3619-5p 1 0 0
chr11:73357690|73357975 hsa-miR-5699-3p 0 1 0
chr11:73357690|73357975 hsa-miR-125b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:73357690|73357975
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MRQLPGAAPPAASVFLPFLLSLPCSHCC
Nucleotide Sequence CTGAGGCAGCTTCCAGGAGCCGCTCCTCCTGCGGCGTCTGTCTTTCTTCCCTTCTTGCTGAGTCTGCCCTGTTCTCACTGCTGTTAG
CircID chr11:73357690|73357975
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MLPHNSRDQTQAGSWLSWRGAHLELGPQGNRQVCSA
Nucleotide Sequence CTGCTTCCTCATAACTCCCGTGATCAGACCCAGGCTGGCTCCTGGCTCAGCTGGAGGGGAGCTCACCTGGAGCTTGGCCCTCAGGGTAACAGACAGGTTTGCTCGGCC
CircID chr11:73357690|73357975
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MAPGSAGGELTWSLALRVTDRFARP
Nucleotide Sequence CTGGCTCCTGGCTCAGCTGGAGGGGAGCTCACCTGGAGCTTGGCCCTCAGGGTAACAGACAGGTTTGCTCGGCCC
CircID chr11:73357690|73357975
ORF Type ORF4
Protein Length 57
Nucleotide Length 174
Protein Sequence MSYCKQRVDWSHPCCSGLRLLGAEAASRSRSSCGVCLSSLLAESALFSLLLAFPASS
Nucleotide Sequence TTGAGTTACTGCAAGCAAAGGGTTGATTGGAGCCATCCATGTTGTTCAGGGCTGAGACTGTTGGGAGCTGAGGCAGCTTCCAGGAGCCGCTCCTCCTGCGGCGTCTGTCTTTCTTCCCTTCTTGCTGAGTCTGCCCTGTTCTCACTGCTGTTAGCTTTCCCTGCTTCCTCATAA
CircID chr11:73357690|73357975
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MEAASAPNSLSPEQHGWLQSTLCLQ
Nucleotide Sequence CTGGAAGCTGCCTCAGCTCCCAACAGTCTCAGCCCTGAACAACATGGATGGCTCCAATCAACCCTTTGCTTGCAGTAA
CircID chr11:73357690|73357975
ORF Type ORF6
Protein Length 91
Nucleotide Length 273
Protein Sequence MSVTLRAKLQVSSPPAEPGASLGLITGVMRKQGKLTAVRTGQTQQEGKKDRRRRRSGSWKLPQLPTVSALNNMDGSNQPFACSNSSECLFP
Nucleotide Sequence CTGTCTGTTACCCTGAGGGCCAAGCTCCAGGTGAGCTCCCCTCCAGCTGAGCCAGGAGCCAGCCTGGGTCTGATCACGGGAGTTATGAGGAAGCAGGGAAAGCTAACAGCAGTGAGAACAGGGCAGACTCAGCAAGAAGGGAAGAAAGACAGACGCCGCAGGAGGAGCGGCTCCTGGAAGCTGCCTCAGCTCCCAACAGTCTCAGCCCTGAACAACATGGATGGCTCCAATCAACCCTTTGCTTGCAGTAACTCAAGCGAGTGTCTGTTCCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab