CircRNA Information

General Information
circRNA Basic Information
CircID chr11:73390875|73392242
Strand +
CircType exon
Host Gene ENSG00000054967.11;
Algorism CIRI2;
Sequence CTCCACGCCACGTCGGGCCCGCCGCCCCCACTCATCACAGCCATGAGTACCCAGAGGTGCCCAGGAACATGGTTGACATGGAACGCGGGGAACCCCCCAAGGCCCAAACCACCTGCGAGGAGGGAAGATACCACTGAGGCCCAGAAGTTTCCCCAAACACTATCCTTAGGAGAGGCTGGATTCCTTCCTACCAGGCACCCTCCGTGGTCCTGCCCCATCCCATTTCACAGATGGGAAGAATGAGGCCTGCTCAGGGTACAATAAGGCTGGGGCCCCAGGATCCAGAGTCCTGGTCACCCAGCCAGGAGCCCTCCCCGCACTCCCTTTGGCTTACCCAGGCCAGCAGTCTCCACAGAGTGTATCTCGAGTTGCCATGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:73390875|73392242 hsa-miR-10a-5p 0 0 1
chr11:73390875|73392242 hsa-miR-10a-3p 0 0 1
chr11:73390875|73392242 hsa-miR-10b-5p 0 0 1
chr11:73390875|73392242 hsa-miR-10b-3p 0 0 1
chr11:73390875|73392242 hsa-miR-326 0 0 1
chr11:73390875|73392242 hsa-miR-505-5p 0 0 1
chr11:73390875|73392242 hsa-miR-505-3p 0 0 1
chr11:73390875|73392242 hsa-miR-555 0 0 1
chr11:73390875|73392242 hsa-miR-612 0 1 1
chr11:73390875|73392242 hsa-miR-661 0 1 1
chr11:73390875|73392242 hsa-miR-744-5p 0 0 1
chr11:73390875|73392242 hsa-miR-744-3p 0 0 1
chr11:73390875|73392242 hsa-miR-1286 0 1 1
chr11:73390875|73392242 hsa-miR-1262 0 0 1
chr11:73390875|73392242 hsa-miR-1275 0 0 1
chr11:73390875|73392242 hsa-miR-1252-5p 0 0 1
chr11:73390875|73392242 hsa-miR-1252-3p 0 0 1
chr11:73390875|73392242 hsa-miR-296-5p 0 0 1
chr11:73390875|73392242 hsa-miR-486-3p 0 0 1
chr11:73390875|73392242 hsa-miR-1225-5p 1 0 1
chr11:73390875|73392242 hsa-miR-876-3p 0 0 1
chr11:73390875|73392242 hsa-miR-125a-5p 0 1 1
chr11:73390875|73392242 hsa-miR-330-5p 0 1 1
chr11:73390875|73392242 hsa-miR-125b 0 0 1
chr11:73390875|73392242 hsa-miR-550 0 0 1
chr11:73390875|73392242 hsa-miR-642 0 0 1
chr11:73390875|73392242 hsa-miR-1285 0 0 1
chr11:73390875|73392242 hsa-miR-1254 0 0 1
chr11:73390875|73392242 hsa-miR-203 0 0 1
chr11:73390875|73392242 hsa-miR-608 1 0 0
chr11:73390875|73392242 hsa-miR-637 1 0 0
chr11:73390875|73392242 hsa-miR-762 1 0 0
chr11:73390875|73392242 hsa-miR-760 0 1 0
chr11:73390875|73392242 hsa-miR-1182 1 0 0
chr11:73390875|73392242 hsa-miR-1268a 1 0 0
chr11:73390875|73392242 hsa-miR-1471 0 1 0
chr11:73390875|73392242 hsa-miR-2110 1 1 0
chr11:73390875|73392242 hsa-miR-3147 1 0 0
chr11:73390875|73392242 hsa-miR-3176 0 1 0
chr11:73390875|73392242 hsa-miR-3196 1 1 0
chr11:73390875|73392242 hsa-miR-4298 1 0 0
chr11:73390875|73392242 hsa-miR-4319 0 1 0
chr11:73390875|73392242 hsa-miR-4270 1 1 0
chr11:73390875|73392242 hsa-miR-4292 0 1 0
chr11:73390875|73392242 hsa-miR-3907 1 0 0
chr11:73390875|73392242 hsa-miR-1268b 1 0 0
chr11:73390875|73392242 hsa-miR-4425 1 0 0
chr11:73390875|73392242 hsa-miR-4447 0 1 0
chr11:73390875|73392242 hsa-miR-4462 1 0 0
chr11:73390875|73392242 hsa-miR-4466 1 0 0
chr11:73390875|73392242 hsa-miR-4467 0 1 0
chr11:73390875|73392242 hsa-miR-4476 0 1 0
chr11:73390875|73392242 hsa-miR-4481 0 1 0
chr11:73390875|73392242 hsa-miR-4488 1 1 0
chr11:73390875|73392242 hsa-miR-4505 0 1 0
chr11:73390875|73392242 hsa-miR-4522 0 1 0
chr11:73390875|73392242 hsa-miR-3960 1 0 0
chr11:73390875|73392242 hsa-miR-4651 1 0 0
chr11:73390875|73392242 hsa-miR-4688 1 0 0
chr11:73390875|73392242 hsa-miR-4706 0 1 0
chr11:73390875|73392242 hsa-miR-4721 0 1 0
chr11:73390875|73392242 hsa-miR-4734 1 0 0
chr11:73390875|73392242 hsa-miR-4739 1 0 0
chr11:73390875|73392242 hsa-miR-5090 1 0 0
chr11:73390875|73392242 hsa-miR-5705 1 0 0
chr11:73390875|73392242 hsa-miR-5787 1 1 0
chr11:73390875|73392242 hsa-miR-6127 1 0 0
chr11:73390875|73392242 hsa-miR-6860 1 1 0
chr11:73390875|73392242 hsa-miR-7704 1 0 0
chr11:73390875|73392242 hsa-miR-7974 1 1 0
chr11:73390875|73392242 hsa-miR-8072 1 1 0
chr11:73390875|73392242 hsa-miR-8075 1 0 0
chr11:73390875|73392242 hsa-miR-8089 1 0 0
chr11:73390875|73392242 hsa-miR-4433b-3p 1 0 0
chr11:73390875|73392242 hsa-miR-504-3p 1 1 0
chr11:73390875|73392242 hsa-miR-6765-5p 1 1 0
chr11:73390875|73392242 hsa-miR-3150a-3p 1 0 0
chr11:73390875|73392242 hsa-miR-6861-5p 1 1 0
chr11:73390875|73392242 hsa-miR-4687-3p 1 0 0
chr11:73390875|73392242 hsa-miR-6720-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6728-5p 1 1 0
chr11:73390875|73392242 hsa-miR-3692-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6804-5p 0 1 0
chr11:73390875|73392242 hsa-miR-7114-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6757-5p 1 0 0
chr11:73390875|73392242 hsa-miR-3064-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6890-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6741-5p 1 1 0
chr11:73390875|73392242 hsa-miR-3622b-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6721-5p 0 1 0
chr11:73390875|73392242 hsa-miR-23b-5p 0 1 0
chr11:73390875|73392242 hsa-miR-8069 1 0 0
chr11:73390875|73392242 hsa-miR-3189-5p 1 0 0
chr11:73390875|73392242 hsa-miR-5589-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6776-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6849-3p 0 1 0
chr11:73390875|73392242 hsa-miR-6871-5p 1 0 0
chr11:73390875|73392242 hsa-miR-3180-3p 1 1 0
chr11:73390875|73392242 hsa-miR-6732-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6805-5p 1 0 0
chr11:73390875|73392242 hsa-miR-23a-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6881-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6782-5p 1 0 0
chr11:73390875|73392242 hsa-miR-1343-3p 0 1 0
chr11:73390875|73392242 hsa-miR-6786-5p 1 1 0
chr11:73390875|73392242 hsa-miR-939-3p 0 1 0
chr11:73390875|73392242 hsa-miR-5088-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6772-3p 0 1 0
chr11:73390875|73392242 hsa-miR-1229-5p 1 1 0
chr11:73390875|73392242 hsa-miR-4640-5p 1 0 0
chr11:73390875|73392242 hsa-miR-1908-5p 1 0 0
chr11:73390875|73392242 hsa-miR-1228-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6771-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6749-5p 1 0 0
chr11:73390875|73392242 hsa-miR-4787-5p 1 0 0
chr11:73390875|73392242 hsa-miR-149-3p 0 1 0
chr11:73390875|73392242 hsa-miR-6824-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6789-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6758-3p 0 1 0
chr11:73390875|73392242 hsa-miR-4650-5p 0 1 0
chr11:73390875|73392242 hsa-miR-4716-5p 0 1 0
chr11:73390875|73392242 hsa-miR-10400-5p 1 0 0
chr11:73390875|73392242 hsa-miR-1207-5p 1 0 0
chr11:73390875|73392242 hsa-miR-4763-3p 1 0 0
chr11:73390875|73392242 hsa-miR-6816-5p 1 1 0
chr11:73390875|73392242 hsa-miR-3180 1 1 0
chr11:73390875|73392242 hsa-miR-5001-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6737-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6743-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6752-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6756-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6803-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6819-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6851-5p 1 0 0
chr11:73390875|73392242 hsa-miR-7107-5p 1 0 0
chr11:73390875|73392242 hsa-miR-7110-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6763-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6779-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6879-5p 1 0 0
chr11:73390875|73392242 hsa-miR-7111-5p 1 0 0
chr11:73390875|73392242 hsa-miR-3620-5p 1 0 0
chr11:73390875|73392242 hsa-miR-5189-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6862-5p 0 1 0
chr11:73390875|73392242 hsa-miR-1237-5p 1 1 0
chr11:73390875|73392242 hsa-miR-328-5p 1 0 0
chr11:73390875|73392242 hsa-miR-4685-5p 1 1 0
chr11:73390875|73392242 hsa-miR-4725-3p 1 0 0
chr11:73390875|73392242 hsa-miR-4745-5p 1 1 0
chr11:73390875|73392242 hsa-miR-675-5p 1 1 0
chr11:73390875|73392242 hsa-miR-6777-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6848-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6883-5p 0 1 0
chr11:73390875|73392242 hsa-miR-3187-5p 0 1 0
chr11:73390875|73392242 hsa-miR-4697-5p 1 1 0
chr11:73390875|73392242 hsa-miR-1238-5p 1 1 0
chr11:73390875|73392242 hsa-miR-4758-5p 1 1 0
chr11:73390875|73392242 hsa-miR-3940-5p 1 0 0
chr11:73390875|73392242 hsa-miR-4665-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6736-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6876-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6785-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6790-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6724-5p 1 1 0
chr11:73390875|73392242 hsa-miR-550a-3-5p 0 1 0
chr11:73390875|73392242 hsa-miR-550a-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6512-3p 1 1 0
chr11:73390875|73392242 hsa-miR-4756-5p 0 1 0
chr11:73390875|73392242 hsa-miR-6783-3p 1 1 0
chr11:73390875|73392242 hsa-miR-137-5p 1 0 0
chr11:73390875|73392242 hsa-miR-6781-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:73390875|73392242
ORF Type ORF1
Protein Length 66
Nucleotide Length 201
Protein Sequence MSTQRCPGTWLTWNAGNPPRPKPPARREDTTEAQKFPQTLSLGEAGFLPTRHPPWSCPIPFHRWEE
Nucleotide Sequence ATGAGTACCCAGAGGTGCCCAGGAACATGGTTGACATGGAACGCGGGGAACCCCCCAAGGCCCAAACCACCTGCGAGGAGGGAAGATACCACTGAGGCCCAGAAGTTTCCCCAAACACTATCCTTAGGAGAGGCTGGATTCCTTCCTACCAGGCACCCTCCGTGGTCCTGCCCCATCCCATTTCACAGATGGGAAGAATGA
CircID chr11:73390875|73392242
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence MDSFLPGTLRGPAPSHFTDGKNEACSGYNKAGAPGSRVLVTQPGALPALPLAYPGQQSPQSVSRVAMP
Nucleotide Sequence CTGGATTCCTTCCTACCAGGCACCCTCCGTGGTCCTGCCCCATCCCATTTCACAGATGGGAAGAATGAGGCCTGCTCAGGGTACAATAAGGCTGGGGCCCCAGGATCCAGAGTCCTGGTCACCCAGCCAGGAGCCCTCCCCGCACTCCCTTTGGCTTACCCAGGCCAGCAGTCTCCACAGAGTGTATCTCGAGTTGCCATGCCC
CircID chr11:73390875|73392242
ORF Type ORF3
Protein Length 57
Nucleotide Length 171
Protein Sequence MPHPISQMGRMRPAQGTIRLGPQDPESWSPSQEPSPHSLWLTQASSLHRVYLELPCP
Nucleotide Sequence CTGCCCCATCCCATTTCACAGATGGGAAGAATGAGGCCTGCTCAGGGTACAATAAGGCTGGGGCCCCAGGATCCAGAGTCCTGGTCACCCAGCCAGGAGCCCTCCCCGCACTCCCTTTGGCTTACCCAGGCCAGCAGTCTCCACAGAGTGTATCTCGAGTTGCCATGCCCA
CircID chr11:73390875|73392242
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MDPGAPALLYPEQASFFPSVKWDGAGPRRVPGRKESSLS
Nucleotide Sequence CTGGATCCTGGGGCCCCAGCCTTATTGTACCCTGAGCAGGCCTCATTCTTCCCATCTGTGAAATGGGATGGGGCAGGACCACGGAGGGTGCCTGGTAGGAAGGAATCCAGCCTCTCCTAA
CircID chr11:73390875|73392242
ORF Type ORF5
Protein Length 52
Nucleotide Length 156
Protein Sequence MGKLLGLSGIFPPRRWFGPWGVPRVPCQPCSWAPLGTHGCDEWGRRARRGVE
Nucleotide Sequence TTGGGGAAACTTCTGGGCCTCAGTGGTATCTTCCCTCCTCGCAGGTGGTTTGGGCCTTGGGGGGTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGCACCTCTGGGTACTCATGGCTGTGATGAGTGGGGGCGGCGGGCCCGACGTGGCGTGGAG
CircID chr11:73390875|73392242
ORF Type ORF6
Protein Length 72
Nucleotide Length 216
Protein Sequence MGQDHGGCLVGRNPASPKDSVWGNFWASVVSSLLAGGLGLGGFPAFHVNHVPGHLWVLMAVMSGGGGPDVAW
Nucleotide Sequence ATGGGGCAGGACCACGGAGGGTGCCTGGTAGGAAGGAATCCAGCCTCTCCTAAGGATAGTGTTTGGGGAAACTTCTGGGCCTCAGTGGTATCTTCCCTCCTCGCAGGTGGTTTGGGCCTTGGGGGGTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGCACCTCTGGGTACTCATGGCTGTGATGAGTGGGGGCGGCGGGCCCGACGTGGCGTGG
CircID chr11:73390875|73392242
ORF Type ORF7
Protein Length 34
Nucleotide Length 105
Protein Sequence MWRLLAWVSQRECGEGSWLGDQDSGSWGPSLIVP
Nucleotide Sequence CTGTGGAGACTGCTGGCCTGGGTAAGCCAAAGGGAGTGCGGGGAGGGCTCCTGGCTGGGTGACCAGGACTCTGGATCCTGGGGCCCCAGCCTTATTGTACCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab