CircRNA Information

General Information
circRNA Basic Information
CircID chr11:73968066|73968240
Strand -
CircType exon
Host Gene ENSG00000187726.7;
Algorism CIRI2;
Sequence CTGCCTGCCGTCTGAGGAAGCCTCTCCGCCCCTCCAGCTGAGTGTGTCTATTTTGGGCATGCTCAGTACAGAAGTAATTCTGGGGGGATTCATTTGGGTAAGCTTCTCGGGCTTCTAATCCATCTGGGCTATGGGGGCCAAACTGAAAAGGCCCTTCCAGAAAACCTGCTCTCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:73968066|73968240
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MGKLLGLLIHLGYGGQTEKALPENLLS
Nucleotide Sequence TTGGGTAAGCTTCTCGGGCTTCTAATCCATCTGGGCTATGGGGGCCAAACTGAAAAGGCCCTTCCAGAAAACCTGCTCTCA

CircID chr11:73968066|73968240
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MPSEEASPPLQLSVSILGMLSTEVILGGFIWVSFSGF
Nucleotide Sequence CTGCCGTCTGAGGAAGCCTCTCCGCCCCTCCAGCTGAGTGTGTCTATTTTGGGCATGCTCAGTACAGAAGTAATTCTGGGGGGATTCATTTGGGTAAGCTTCTCGGGCTTCTAA

CircID chr11:73968066|73968240
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MRAGFLEGPFQFGPHSPDGLEAREAYPNESPQNYFCTEHAQNRHTQLEGRRGFLRRQA
Nucleotide Sequence ATGAGAGCAGGTTTTCTGGAAGGGCCTTTTCAGTTTGGCCCCCATAGCCCAGATGGATTAGAAGCCCGAGAAGCTTACCCAAATGAATCCCCCCAGAATTACTTCTGTACTGAGCATGCCCAAAATAGACACACTCAGCTGGAGGGGCGGAGAGGCTTCCTCAGACGGCAGGCA

CircID chr11:73968066|73968240
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MNPPRITSVLSMPKIDTLSWRGGEASSDGRQ
Nucleotide Sequence ATGAATCCCCCCAGAATTACTTCTGTACTGAGCATGCCCAAAATAGACACACTCAGCTGGAGGGGCGGAGAGGCTTCCTCAGACGGCAGGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites