CircRNA Information

General Information
circRNA Basic Information
CircID chr11:75009193|75009347
Strand +
CircType exon
Host Gene ENSG00000162139.8;
Algorism CIRI2;
Sequence CTTCTCCACAAGCTAAGTGCCGGCCTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGCTCCAGCCTGTTGTCATTTCTTCTTCACAGCAGCTACCACCTACACCATCTCTCTAGCCTAGGCCTCGTGTCTGTGACACTTTCTCTTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:75009193|75009347 hsa-miR-22-5p 0 0 1
chr11:75009193|75009347 hsa-miR-22-3p 0 0 1
chr11:75009193|75009347 hsa-miR-597-5p 0 0 1
chr11:75009193|75009347 hsa-miR-597-3p 0 0 1
chr11:75009193|75009347 hsa-miR-645 1 0 1
chr11:75009193|75009347 hsa-miR-649 0 1 1
chr11:75009193|75009347 hsa-miR-1252-5p 0 0 1
chr11:75009193|75009347 hsa-miR-1252-3p 0 0 1
chr11:75009193|75009347 hsa-miR-769-5p 0 0 1
chr11:75009193|75009347 hsa-miR-125a-5p 0 0 1
chr11:75009193|75009347 hsa-miR-1274a 0 0 1
chr11:75009193|75009347 hsa-miR-125b 0 0 1
chr11:75009193|75009347 hsa-miR-549 0 0 1
chr11:75009193|75009347 hsa-miR-601 1 0 0
chr11:75009193|75009347 hsa-miR-608 1 0 0
chr11:75009193|75009347 hsa-miR-1538 1 0 0
chr11:75009193|75009347 hsa-miR-3132 1 0 0
chr11:75009193|75009347 hsa-miR-3135a 1 1 0
chr11:75009193|75009347 hsa-miR-3611 0 1 0
chr11:75009193|75009347 hsa-miR-3652 1 1 0
chr11:75009193|75009347 hsa-miR-3916 1 0 0
chr11:75009193|75009347 hsa-miR-3945 1 0 0
chr11:75009193|75009347 hsa-miR-4430 1 0 0
chr11:75009193|75009347 hsa-miR-4447 1 0 0
chr11:75009193|75009347 hsa-miR-3135b 1 1 0
chr11:75009193|75009347 hsa-miR-4462 1 0 0
chr11:75009193|75009347 hsa-miR-4533 1 0 0
chr11:75009193|75009347 hsa-miR-4647 1 0 0
chr11:75009193|75009347 hsa-miR-4706 1 0 0
chr11:75009193|75009347 hsa-miR-4739 1 0 0
chr11:75009193|75009347 hsa-miR-4741 1 0 0
chr11:75009193|75009347 hsa-miR-5093 1 1 0
chr11:75009193|75009347 hsa-miR-6069 1 0 0
chr11:75009193|75009347 hsa-miR-6077 1 1 0
chr11:75009193|75009347 hsa-miR-8060 1 0 0
chr11:75009193|75009347 hsa-miR-8078 1 0 0
chr11:75009193|75009347 hsa-miR-8085 1 1 0
chr11:75009193|75009347 hsa-miR-12122 1 1 0
chr11:75009193|75009347 hsa-miR-210-3p 1 0 0
chr11:75009193|75009347 hsa-miR-6894-5p 1 0 0
chr11:75009193|75009347 hsa-miR-3622a-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6089 1 0 0
chr11:75009193|75009347 hsa-miR-4709-3p 0 1 0
chr11:75009193|75009347 hsa-miR-197-5p 1 0 0
chr11:75009193|75009347 hsa-miR-8069 1 0 0
chr11:75009193|75009347 hsa-miR-6748-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6772-5p 1 1 0
chr11:75009193|75009347 hsa-miR-6829-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6760-5p 1 1 0
chr11:75009193|75009347 hsa-miR-6874-5p 0 1 0
chr11:75009193|75009347 hsa-miR-6821-5p 1 0 0
chr11:75009193|75009347 hsa-miR-204-3p 0 1 0
chr11:75009193|75009347 hsa-miR-6771-5p 1 0 0
chr11:75009193|75009347 hsa-miR-3202 0 1 0
chr11:75009193|75009347 hsa-miR-149-3p 1 0 0
chr11:75009193|75009347 hsa-miR-6830-5p 0 1 0
chr11:75009193|75009347 hsa-miR-6802-5p 0 1 0
chr11:75009193|75009347 hsa-miR-670-5p 0 1 0
chr11:75009193|75009347 hsa-miR-1233-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6769b-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6778-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6775-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6803-5p 1 0 0
chr11:75009193|75009347 hsa-miR-7107-5p 1 0 0
chr11:75009193|75009347 hsa-miR-7110-5p 1 0 0
chr11:75009193|75009347 hsa-miR-1249-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6780a-5p 1 1 0
chr11:75009193|75009347 hsa-miR-6797-5p 1 1 0
chr11:75009193|75009347 hsa-miR-7111-5p 1 0 0
chr11:75009193|75009347 hsa-miR-4728-5p 1 1 0
chr11:75009193|75009347 hsa-miR-5196-5p 1 1 0
chr11:75009193|75009347 hsa-miR-4685-5p 1 0 0
chr11:75009193|75009347 hsa-miR-4726-5p 1 0 0
chr11:75009193|75009347 hsa-miR-6856-5p 1 0 0
chr11:75009193|75009347 hsa-miR-7151-3p 0 1 0
chr11:75009193|75009347 hsa-miR-4747-5p 1 1 0
chr11:75009193|75009347 hsa-miR-6715b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:75009193|75009347
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MCRSLFLPTGFREQLQPVVISSSQQLPPTPSL
Nucleotide Sequence CTGTGCAGGTCTCTCTTCCTTCCCACAGGTTTCAGGGAACAGCTCCAGCCTGTTGTCATTTCTTCTTCACAGCAGCTACCACCTACACCATCTCTCTAG
CircID chr11:75009193|75009347
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MLSFLLHSSYHLHHLSSLGLVSVTLSL
Nucleotide Sequence CTGTTGTCATTTCTTCTTCACAGCAGCTACCACCTACACCATCTCTCTAGCCTAGGCCTCGTGTCTGTGACACTTTCTCTT
CircID chr11:75009193|75009347
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MTTGWSCSLKPVGRKRDLHRPALSLWR
Nucleotide Sequence ATGACAACAGGCTGGAGCTGTTCCCTGAAACCTGTGGGAAGGAAGAGAGACCTGCACAGGCCGGCACTTAGCTTGTGGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab