CircRNA Information

General Information
circRNA Basic Information
CircID chr11:75435106|75435233
Strand -
CircType exon
Host Gene ENSG00000158555.13;
Algorism CIRI2;
Sequence TCAGGTGCCTCCTGGCACAGACAGGAGGACAGATGGCACAGGTGAGCATCCACACACTCCATTGCCACAGGGGGTATGGCATGGCCCATGACCCATCAAAGCTTCCAGGTCGGGATACAGGAGAGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:75435106|75435233 hsa-miR-122-5p 0 0 1
chr11:75435106|75435233 hsa-miR-122-3p 0 0 1
chr11:75435106|75435233 hsa-miR-619-5p 0 0 1
chr11:75435106|75435233 hsa-miR-619-3p 0 0 1
chr11:75435106|75435233 hsa-miR-631 0 0 1
chr11:75435106|75435233 hsa-miR-650 0 0 1
chr11:75435106|75435233 hsa-miR-665 0 1 1
chr11:75435106|75435233 hsa-miR-1178-5p 0 0 1
chr11:75435106|75435233 hsa-miR-1178-3p 0 0 1
chr11:75435106|75435233 hsa-miR-1227-5p 0 0 1
chr11:75435106|75435233 hsa-miR-1227-3p 0 0 1
chr11:75435106|75435233 hsa-miR-671-5p 0 0 1
chr11:75435106|75435233 hsa-miR-486-5p 0 0 1
chr11:75435106|75435233 hsa-miR-574-5p 1 1 1
chr11:75435106|75435233 hsa-miR-1308 0 0 1
chr11:75435106|75435233 hsa-miR-644 0 0 1
chr11:75435106|75435233 hsa-miR-147 0 0 1
chr11:75435106|75435233 hsa-miR-147a 0 1 0
chr11:75435106|75435233 hsa-miR-663b 1 0 0
chr11:75435106|75435233 hsa-miR-3137 1 0 0
chr11:75435106|75435233 hsa-miR-3165 1 0 0
chr11:75435106|75435233 hsa-miR-3612 0 1 0
chr11:75435106|75435233 hsa-miR-3661 0 1 0
chr11:75435106|75435233 hsa-miR-3911 1 1 0
chr11:75435106|75435233 hsa-miR-4421 0 1 0
chr11:75435106|75435233 hsa-miR-4752 1 1 0
chr11:75435106|75435233 hsa-miR-8056 1 0 0
chr11:75435106|75435233 hsa-miR-6749-3p 1 0 0
chr11:75435106|75435233 hsa-miR-7114-5p 1 0 0
chr11:75435106|75435233 hsa-miR-6515-5p 1 0 0
chr11:75435106|75435233 hsa-miR-6514-5p 0 1 0
chr11:75435106|75435233 hsa-miR-885-3p 1 0 0
chr11:75435106|75435233 hsa-miR-4640-3p 1 1 0
chr11:75435106|75435233 hsa-miR-3120-5p 0 1 0
chr11:75435106|75435233 hsa-miR-3681-5p 1 0 0
chr11:75435106|75435233 hsa-miR-660-3p 0 1 0
chr11:75435106|75435233 hsa-miR-6872-3p 0 1 0
chr11:75435106|75435233 hsa-miR-6508-3p 0 1 0
chr11:75435106|75435233 hsa-miR-1914-5p 0 1 0
chr11:75435106|75435233 hsa-miR-6800-3p 1 0 0
chr11:75435106|75435233 hsa-miR-3085-5p 1 0 0
chr11:75435106|75435233 hsa-miR-6855-5p 1 0 0
chr11:75435106|75435233 hsa-miR-6529-3p 0 1 0
chr11:75435106|75435233 hsa-miR-4769-3p 0 1 0
chr11:75435106|75435233 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:75435106|75435233
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MAQTGGQMAQVSIHTLHCHRGYGMAHDPSKLPGRDTGEG
Nucleotide Sequence CTGGCACAGACAGGAGGACAGATGGCACAGGTGAGCATCCACACACTCCATTGCCACAGGGGGTATGGCATGGCCCATGACCCATCAAAGCTTCCAGGTCGGGATACAGGAGAGGGC

CircID chr11:75435106|75435233
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MGHAIPPVAMECVDAHLCHLSSCLCQEAP
Nucleotide Sequence ATGGGCCATGCCATACCCCCTGTGGCAATGGAGTGTGTGGATGCTCACCTGTGCCATCTGTCCTCCTGTCTGTGCCAGGAGGCACCT

CircID chr11:75435106|75435233
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MPYPLWQWSVWMLTCAICPPVCARRHL
Nucleotide Sequence ATGCCATACCCCCTGTGGCAATGGAGTGTGTGGATGCTCACCTGTGCCATCTGTCCTCCTGTCTGTGCCAGGAGGCACCTG

CircID chr11:75435106|75435233
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MYPDLEALMGHGPCHTPCGNGVCGCSPVPSVLLSVPGGT
Nucleotide Sequence CTGTATCCCGACCTGGAAGCTTTGATGGGTCATGGGCCATGCCATACCCCCTGTGGCAATGGAGTGTGTGGATGCTCACCTGTGCCATCTGTCCTCCTGTCTGTGCCAGGAGGCACCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites