CircRNA Information

General Information
circRNA Basic Information
CircID chr11:75568989|75569153
Strand +
CircType exon
Host Gene ENSG00000149257.12;
Algorism CIRI2;
Sequence CTCCACCACACCCTTGGGCAAGGAGATGGCAACAGCCTTCTTCTGCATCTTCCCCATCCAGATCTTCAGCTGCTCTTTGGTTAGCAGCTTTTCAAGGCGCTCGAGAGGCTCCACGTGATGGGGCATGAGGATGATGAGGCTGGAGAGCTTGTGGGCCAGGGGCAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:75568989|75569153 hsa-miR-320a-5p 0 0 1
chr11:75568989|75569153 hsa-miR-320a-3p 0 0 1
chr11:75568989|75569153 hsa-miR-646 0 0 1
chr11:75568989|75569153 hsa-miR-766-5p 0 0 1
chr11:75568989|75569153 hsa-miR-766-3p 0 0 1
chr11:75568989|75569153 hsa-miR-298 0 1 1
chr11:75568989|75569153 hsa-miR-1276 0 0 1
chr11:75568989|75569153 hsa-miR-339-3p 0 1 1
chr11:75568989|75569153 hsa-miR-502-5p 0 1 1
chr11:75568989|75569153 hsa-miR-331-3p 0 0 1
chr11:75568989|75569153 hsa-miR-516a-5p 0 0 1
chr11:75568989|75569153 hsa-miR-320b 0 1 1
chr11:75568989|75569153 hsa-miR-320c 0 0 1
chr11:75568989|75569153 hsa-miR-320d 0 0 1
chr11:75568989|75569153 hsa-miR-558 0 1 0
chr11:75568989|75569153 hsa-miR-1270 0 1 0
chr11:75568989|75569153 hsa-miR-3185 0 1 0
chr11:75568989|75569153 hsa-miR-3978 0 1 0
chr11:75568989|75569153 hsa-miR-4739 1 0 0
chr11:75568989|75569153 hsa-miR-5706 0 1 0
chr11:75568989|75569153 hsa-miR-6072 0 1 0
chr11:75568989|75569153 hsa-miR-6894-5p 1 1 0
chr11:75568989|75569153 hsa-miR-210-5p 0 1 0
chr11:75568989|75569153 hsa-miR-4722-5p 1 1 0
chr11:75568989|75569153 hsa-miR-3189-5p 0 1 0
chr11:75568989|75569153 hsa-miR-6849-3p 0 1 0
chr11:75568989|75569153 hsa-miR-6796-3p 0 1 0
chr11:75568989|75569153 hsa-miR-3156-5p 0 1 0
chr11:75568989|75569153 hsa-miR-4793-5p 1 0 0
chr11:75568989|75569153 hsa-miR-6763-3p 1 0 0
chr11:75568989|75569153 hsa-miR-5196-3p 0 1 0
chr11:75568989|75569153 hsa-miR-4776-3p 0 1 0
chr11:75568989|75569153 hsa-miR-6814-5p 0 1 0
chr11:75568989|75569153 hsa-miR-6755-3p 0 1 0
chr11:75568989|75569153 hsa-miR-744-3p 0 1 0
chr11:75568989|75569153 hsa-miR-6780b-5p 0 1 0
chr11:75568989|75569153 hsa-miR-4436b-3p 0 1 0
chr11:75568989|75569153 hsa-miR-939-5p 1 0 0
chr11:75568989|75569153 hsa-miR-6877-3p 1 1 0
chr11:75568989|75569153 hsa-miR-6823-3p 0 1 0
chr11:75568989|75569153 hsa-miR-6891-3p 0 1 0
chr11:75568989|75569153 hsa-miR-193a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:75568989|75569153
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MGKEMATAFFCIFPIQIFSCSLVSSFSRRSRGST
Nucleotide Sequence TTGGGCAAGGAGATGGCAACAGCCTTCTTCTGCATCTTCCCCATCCAGATCTTCAGCTGCTCTTTGGTTAGCAGCTTTTCAAGGCGCTCGAGAGGCTCCACGTGA

CircID chr11:75568989|75569153
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MPLAHKLSSLIILMPHHVEPLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVE
Nucleotide Sequence ATGCCCCTGGCCCACAAGCTCTCCAGCCTCATCATCCTCATGCCCCATCACGTGGAGCCTCTCGAGCGCCTTGAAAAGCTGCTAACCAAAGAGCAGCTGAAGATCTGGATGGGGAAGATGCAGAAGAAGGCTGTTGCCATCTCCTTGCCCAAGGGTGTGGTGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites