CircRNA Information

General Information
circRNA Basic Information
CircID chr11:75569046|75569153
Strand +
CircType exon
Host Gene ENSG00000149257.12;
Algorism CIRI2;
Sequence CTCCACCACACCCTTGGGCAAGGAGATGGCAACAGCCTTCTTCTGCATCTTCCCCATCCAGATCTTCAGCTGCTCTTTGGTTAGCAGCTTTTCAAGGCGCTCGAGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:75569046|75569153 hsa-miR-320a-5p 0 0 1
chr11:75569046|75569153 hsa-miR-320a-3p 0 0 1
chr11:75569046|75569153 hsa-miR-646 0 0 1
chr11:75569046|75569153 hsa-miR-298 0 1 1
chr11:75569046|75569153 hsa-miR-1276 0 0 1
chr11:75569046|75569153 hsa-miR-339-3p 0 1 1
chr11:75569046|75569153 hsa-miR-502-5p 0 1 1
chr11:75569046|75569153 hsa-miR-516a-5p 0 0 1
chr11:75569046|75569153 hsa-miR-320b 0 1 1
chr11:75569046|75569153 hsa-miR-320c 0 0 1
chr11:75569046|75569153 hsa-miR-320d 0 0 1
chr11:75569046|75569153 hsa-miR-558 0 1 0
chr11:75569046|75569153 hsa-miR-1270 0 1 0
chr11:75569046|75569153 hsa-miR-3185 0 1 0
chr11:75569046|75569153 hsa-miR-3978 0 1 0
chr11:75569046|75569153 hsa-miR-4739 1 0 0
chr11:75569046|75569153 hsa-miR-5706 0 1 0
chr11:75569046|75569153 hsa-miR-6894-5p 1 1 0
chr11:75569046|75569153 hsa-miR-7847-3p 1 0 0
chr11:75569046|75569153 hsa-miR-4722-5p 0 1 0
chr11:75569046|75569153 hsa-miR-7160-5p 1 0 0
chr11:75569046|75569153 hsa-miR-3156-5p 1 1 0
chr11:75569046|75569153 hsa-miR-4776-3p 0 1 0
chr11:75569046|75569153 hsa-miR-6814-5p 0 1 0
chr11:75569046|75569153 hsa-miR-6755-3p 0 1 0
chr11:75569046|75569153 hsa-miR-744-3p 0 1 0
chr11:75569046|75569153 hsa-miR-6870-5p 1 0 0
chr11:75569046|75569153 hsa-miR-6756-5p 1 0 0
chr11:75569046|75569153 hsa-miR-7111-5p 1 0 0
chr11:75569046|75569153 hsa-miR-5196-5p 1 0 0
chr11:75569046|75569153 hsa-miR-6780b-5p 1 1 0
chr11:75569046|75569153 hsa-miR-4632-5p 1 0 0
chr11:75569046|75569153 hsa-miR-4436b-3p 0 1 0
chr11:75569046|75569153 hsa-miR-939-5p 1 0 0
chr11:75569046|75569153 hsa-miR-3679-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:75569046|75569153
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MGKEMATAFFCIFPIQIFSCSLVSSFSRRSR
Nucleotide Sequence TTGGGCAAGGAGATGGCAACAGCCTTCTTCTGCATCTTCCCCATCCAGATCTTCAGCTGCTCTTTGGTTAGCAGCTTTTCAAGGCGCTCGAGA

CircID chr11:75569046|75569153
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MLTKEQLKIWMGKMQKKAVAISLPKGVVE
Nucleotide Sequence CTGCTAACCAAAGAGCAGCTGAAGATCTGGATGGGGAAGATGCAGAAGAAGGCTGTTGCCATCTCCTTGCCCAAGGGTGTGGTGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites