CircRNA Information

General Information
circRNA Basic Information
CircID chr11:76186719|76186877
Strand -
CircType exon
Host Gene ENSG00000085741.11;
Algorism CIRI2;
Sequence CCCTTCCCGGAGGCTGGTCTCTGTGGCCCTGAAAGGTCAAGTCTGTATCAGTCTCACCGATCCCAAGCCCCGCTCCTTACACCAGCCTGTGGGCACTCCAGAGCCTCAGGCTGCCAAGTTATTTTTAATCTTGTCGGTTTCCTTTGATGTCCTGCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:76186719|76186877 hsa-miR-192-5p 0 0 1
chr11:76186719|76186877 hsa-miR-192-3p 0 0 1
chr11:76186719|76186877 hsa-miR-215-5p 0 0 1
chr11:76186719|76186877 hsa-miR-215-3p 0 0 1
chr11:76186719|76186877 hsa-miR-122-5p 0 0 1
chr11:76186719|76186877 hsa-miR-122-3p 0 0 1
chr11:76186719|76186877 hsa-miR-638 1 1 1
chr11:76186719|76186877 hsa-miR-744-5p 0 0 1
chr11:76186719|76186877 hsa-miR-744-3p 0 0 1
chr11:76186719|76186877 hsa-miR-760 0 1 1
chr11:76186719|76186877 hsa-miR-1286 0 1 1
chr11:76186719|76186877 hsa-miR-885-3p 0 0 1
chr11:76186719|76186877 hsa-miR-485-5p 0 0 1
chr11:76186719|76186877 hsa-miR-769-3p 0 0 1
chr11:76186719|76186877 hsa-miR-450b-3p 0 0 1
chr11:76186719|76186877 hsa-miR-548c-3p 0 0 1
chr11:76186719|76186877 hsa-miR-138 0 0 1
chr11:76186719|76186877 hsa-miR-516b 0 0 1
chr11:76186719|76186877 hsa-miR-661 0 1 0
chr11:76186719|76186877 hsa-miR-762 1 0 0
chr11:76186719|76186877 hsa-miR-544b 0 1 0
chr11:76186719|76186877 hsa-miR-3141 1 0 0
chr11:76186719|76186877 hsa-miR-3918 0 1 0
chr11:76186719|76186877 hsa-miR-3929 0 1 0
chr11:76186719|76186877 hsa-miR-4496 0 1 0
chr11:76186719|76186877 hsa-miR-4505 1 0 0
chr11:76186719|76186877 hsa-miR-4508 0 1 0
chr11:76186719|76186877 hsa-miR-4651 1 0 0
chr11:76186719|76186877 hsa-miR-5090 1 0 0
chr11:76186719|76186877 hsa-miR-5787 1 0 0
chr11:76186719|76186877 hsa-miR-7978 0 1 0
chr11:76186719|76186877 hsa-miR-138-5p 0 1 0
chr11:76186719|76186877 hsa-miR-4433b-3p 1 1 0
chr11:76186719|76186877 hsa-miR-1273h-3p 0 1 0
chr11:76186719|76186877 hsa-miR-4433a-3p 1 0 0
chr11:76186719|76186877 hsa-miR-671-5p 1 0 0
chr11:76186719|76186877 hsa-miR-7106-5p 1 0 0
chr11:76186719|76186877 hsa-miR-4687-3p 1 0 0
chr11:76186719|76186877 hsa-miR-6721-5p 1 0 0
chr11:76186719|76186877 hsa-miR-3151-5p 1 0 0
chr11:76186719|76186877 hsa-miR-2467-5p 0 1 0
chr11:76186719|76186877 hsa-miR-3194-5p 0 1 0
chr11:76186719|76186877 hsa-miR-6740-5p 0 1 0
chr11:76186719|76186877 hsa-miR-1229-5p 1 0 0
chr11:76186719|76186877 hsa-miR-1908-5p 1 0 0
chr11:76186719|76186877 hsa-miR-149-3p 1 0 0
chr11:76186719|76186877 hsa-miR-3162-5p 1 0 0
chr11:76186719|76186877 hsa-miR-6781-5p 1 0 0
chr11:76186719|76186877 hsa-miR-7112-5p 1 0 0
chr11:76186719|76186877 hsa-miR-6895-5p 0 1 0
chr11:76186719|76186877 hsa-miR-873-3p 0 1 0
chr11:76186719|76186877 hsa-miR-371b-3p 0 1 0
chr11:76186719|76186877 hsa-miR-4771 0 1 0
chr11:76186719|76186877 hsa-miR-1207-5p 1 0 0
chr11:76186719|76186877 hsa-miR-4763-3p 1 0 0
chr11:76186719|76186877 hsa-miR-6816-5p 1 0 0
chr11:76186719|76186877 hsa-miR-6893-5p 1 0 0
chr11:76186719|76186877 hsa-miR-6775-5p 1 1 0
chr11:76186719|76186877 hsa-miR-5001-5p 1 1 0
chr11:76186719|76186877 hsa-miR-6879-5p 1 1 0
chr11:76186719|76186877 hsa-miR-7111-5p 1 0 0
chr11:76186719|76186877 hsa-miR-10396a-5p 1 1 0
chr11:76186719|76186877 hsa-miR-10396b-5p 1 0 0
chr11:76186719|76186877 hsa-miR-4632-5p 1 0 0
chr11:76186719|76186877 hsa-miR-4745-5p 1 0 0
chr11:76186719|76186877 hsa-miR-4749-5p 1 0 0
chr11:76186719|76186877 hsa-miR-6735-5p 1 1 0
chr11:76186719|76186877 hsa-miR-6858-5p 1 0 0
chr11:76186719|76186877 hsa-miR-4436b-3p 1 1 0
chr11:76186719|76186877 hsa-miR-4758-5p 1 0 0
chr11:76186719|76186877 hsa-miR-6855-5p 0 1 0
chr11:76186719|76186877 hsa-miR-6762-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:76186719|76186877
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MYQSHRSQAPLLTPACGHSRASGCQVIFNLVGFL
Nucleotide Sequence CTGTATCAGTCTCACCGATCCCAAGCCCCGCTCCTTACACCAGCCTGTGGGCACTCCAGAGCCTCAGGCTGCCAAGTTATTTTTAATCTTGTCGGTTTCCTTTGA
CircID chr11:76186719|76186877
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MVSVALKGQVCISLTDPKPRSLHQPVGTPEPQAAKLFLILSVSFDVLP
Nucleotide Sequence CTGGTCTCTGTGGCCCTGAAAGGTCAAGTCTGTATCAGTCTCACCGATCCCAAGCCCCGCTCCTTACACCAGCCTGTGGGCACTCCAGAGCCTCAGGCTGCCAAGTTATTTTTAATCTTGTCGGTTTCCTTTGATGTCCTGCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab