CircRNA Information

General Information
circRNA Basic Information
CircID chr11:7648872|7649235
Strand +
CircType exon
Host Gene ENSG00000166387.10;
Algorism CIRI2;
Sequence CACAGTTAGGTATTGCAGCATTCGTCTGTCAACTCTAGATTCATGAAACTGGTCTTTGTACTGGGGTAAGCCAATATCATCAAGCCACCCTACAAATACAAAAACCCCAGATGTGTCAGGATTCATGAGAATGAGAGAATGTAGACACCAAAAAAAGGGGAGCAAATTATATTTTGAGGTTCGTTTTATTCCCCCAAAAGTTTAGTAATTCCTCTGCTTTTTACAAGGAGACAGCTGTCCTTGAGGTACCCATTTAACAGGAAAATTCTTTCTACTCTTAGTTGCTGCCAGAGACATTCTTAATACATATATGCCTATCCTTACTTGTCACCCAAATGTGGTCTAGCAGTGCAGACTTCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:7648872|7649235 hsa-miR-181c-5p 0 0 1
chr11:7648872|7649235 hsa-miR-181c-3p 0 0 1
chr11:7648872|7649235 hsa-miR-186-5p 0 0 1
chr11:7648872|7649235 hsa-miR-186-3p 0 0 1
chr11:7648872|7649235 hsa-miR-326 0 0 1
chr11:7648872|7649235 hsa-miR-433-5p 0 0 1
chr11:7648872|7649235 hsa-miR-433-3p 0 0 1
chr11:7648872|7649235 hsa-miR-181d-5p 0 0 1
chr11:7648872|7649235 hsa-miR-181d-3p 0 0 1
chr11:7648872|7649235 hsa-miR-522-5p 0 0 1
chr11:7648872|7649235 hsa-miR-522-3p 0 0 1
chr11:7648872|7649235 hsa-miR-593-5p 0 0 1
chr11:7648872|7649235 hsa-miR-593-3p 0 0 1
chr11:7648872|7649235 hsa-miR-625-5p 0 0 1
chr11:7648872|7649235 hsa-miR-625-3p 0 0 1
chr11:7648872|7649235 hsa-miR-626 0 0 1
chr11:7648872|7649235 hsa-miR-637 0 0 1
chr11:7648872|7649235 hsa-miR-934 0 0 1
chr11:7648872|7649235 hsa-miR-1262 0 0 1
chr11:7648872|7649235 hsa-miR-1275 0 0 1
chr11:7648872|7649235 hsa-miR-129-5p 0 0 1
chr11:7648872|7649235 hsa-miR-770-5p 0 1 1
chr11:7648872|7649235 hsa-miR-885-3p 1 0 1
chr11:7648872|7649235 hsa-miR-1225-5p 0 0 1
chr11:7648872|7649235 hsa-miR-524-5p 0 0 1
chr11:7648872|7649235 hsa-miR-518d-5p 0 0 1
chr11:7648872|7649235 hsa-miR-519b-5p 0 0 1
chr11:7648872|7649235 hsa-miR-519c-5p 0 0 1
chr11:7648872|7649235 hsa-miR-520c-5p 0 0 1
chr11:7648872|7649235 hsa-miR-330-5p 0 0 1
chr11:7648872|7649235 hsa-miR-520d-5p 0 0 1
chr11:7648872|7649235 hsa-miR-181a 0 0 1
chr11:7648872|7649235 hsa-miR-181b 0 0 1
chr11:7648872|7649235 hsa-miR-526a 0 0 1
chr11:7648872|7649235 hsa-miR-219-1-3p 0 0 1
chr11:7648872|7649235 hsa-miR-608 1 0 0
chr11:7648872|7649235 hsa-miR-1293 1 1 0
chr11:7648872|7649235 hsa-miR-1294 1 0 0
chr11:7648872|7649235 hsa-miR-3138 1 0 0
chr11:7648872|7649235 hsa-miR-3196 1 0 0
chr11:7648872|7649235 hsa-miR-4483 1 0 0
chr11:7648872|7649235 hsa-miR-4506 0 1 0
chr11:7648872|7649235 hsa-miR-4651 1 0 0
chr11:7648872|7649235 hsa-miR-4784 0 1 0
chr11:7648872|7649235 hsa-miR-5191 1 0 0
chr11:7648872|7649235 hsa-miR-5703 0 1 0
chr11:7648872|7649235 hsa-miR-6745 1 0 0
chr11:7648872|7649235 hsa-miR-6728-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6806-5p 1 0 0
chr11:7648872|7649235 hsa-miR-197-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6742-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6796-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6782-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4793-3p 0 1 0
chr11:7648872|7649235 hsa-miR-1229-5p 1 0 0
chr11:7648872|7649235 hsa-miR-7154-5p 0 1 0
chr11:7648872|7649235 hsa-miR-6800-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6758-3p 0 1 0
chr11:7648872|7649235 hsa-miR-6868-5p 0 1 0
chr11:7648872|7649235 hsa-miR-4796-5p 0 1 0
chr11:7648872|7649235 hsa-miR-6812-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6865-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6737-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6756-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6819-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6842-5p 1 0 0
chr11:7648872|7649235 hsa-miR-7111-5p 1 0 0
chr11:7648872|7649235 hsa-miR-3620-5p 1 0 0
chr11:7648872|7649235 hsa-miR-642b-3p 0 1 0
chr11:7648872|7649235 hsa-miR-328-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4701-3p 1 1 0
chr11:7648872|7649235 hsa-miR-6795-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4769-5p 1 0 0
chr11:7648872|7649235 hsa-miR-3940-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4665-5p 1 0 0
chr11:7648872|7649235 hsa-miR-6736-5p 1 0 0
chr11:7648872|7649235 hsa-miR-3679-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4756-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4768-5p 0 1 0
chr11:7648872|7649235 hsa-miR-135a-2-3p 1 0 0
chr11:7648872|7649235 hsa-miR-642a-3p 0 1 0
chr11:7648872|7649235 hsa-miR-26a-5p 1 0 0
chr11:7648872|7649235 hsa-miR-4712-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:7648872|7649235
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MLFTRRQLSLRYPFNRKILSTLSCCQRHS
Nucleotide Sequence CTGCTTTTTACAAGGAGACAGCTGTCCTTGAGGTACCCATTTAACAGGAAAATTCTTTCTACTCTTAGTTGCTGCCAGAGACATTCTTAA

CircID chr11:7648872|7649235
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MYWGKPISSSHPTNTKTPDVSGFMRMRECRHQKKGSKLYFEVRFIPPKV
Nucleotide Sequence TTGTACTGGGGTAAGCCAATATCATCAAGCCACCCTACAAATACAAAAACCCCAGATGTGTCAGGATTCATGAGAATGAGAGAATGTAGACACCAAAAAAAGGGGAGCAAATTATATTTTGAGGTTCGTTTTATTCCCCCAAAAGTTTAG

CircID chr11:7648872|7649235
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MRFVLFPQKFSNSSAFYKETAVLEVPI
Nucleotide Sequence TTGAGGTTCGTTTTATTCCCCCAAAAGTTTAGTAATTCCTCTGCTTTTTACAAGGAGACAGCTGTCCTTGAGGTACCCATTTAA

CircID chr11:7648872|7649235
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MLPETFLIHICLSLLVTQMWSSSADFS
Nucleotide Sequence TTGCTGCCAGAGACATTCTTAATACATATATGCCTATCCTTACTTGTCACCCAAATGTGGTCTAGCAGTGCAGACTTCTCC

CircID chr11:7648872|7649235
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MSLAATKSRKNFPVKWVPQGQLSPCKKQRNY
Nucleotide Sequence ATGTCTCTGGCAGCAACTAAGAGTAGAAAGAATTTTCCTGTTAAATGGGTACCTCAAGGACAGCTGTCTCCTTGTAAAAAGCAGAGGAATTACTAA

CircID chr11:7648872|7649235
ORF Type ORF6
Protein Length 55
Nucleotide Length 165
Protein Sequence MLPFFWCLHSLILMNPDTSGVFVFVGWLDDIGLPQYKDQFHESRVDRRMLQYLTV
Nucleotide Sequence TTGCTCCCCTTTTTTTGGTGTCTACATTCTCTCATTCTCATGAATCCTGACACATCTGGGGTTTTTGTATTTGTAGGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACAGACGAATGCTGCAATACCTAACTGTG

CircID chr11:7648872|7649235
ORF Type ORF7
Protein Length 25
Nucleotide Length 78
Protein Sequence MMILAYPSTKTSFMNLELTDECCNT
Nucleotide Sequence TTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACAGACGAATGCTGCAATACCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites