CircRNA Information

General Information
circRNA Basic Information
CircID chr11:76659393|76659608
Strand -
CircType exon
Host Gene ENSG00000137507.10;
Algorism CIRI2;
Sequence CGCCCAACTTCTGGCTTCCACAGCTGGACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGAAAGGTGTCCTGGGCTGTAATTTGGAGACCAGAGTTCTGGGATCCCGGATCACTGTGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACCTAGAGTGTCTCCCGGCTTCTTTAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:76659393|76659608 hsa-let-7b-5p 0 0 1
chr11:76659393|76659608 hsa-let-7b-3p 0 0 1
chr11:76659393|76659608 hsa-let-7c-5p 0 0 1
chr11:76659393|76659608 hsa-let-7c-3p 0 0 1
chr11:76659393|76659608 hsa-let-7d-5p 0 0 1
chr11:76659393|76659608 hsa-let-7d-3p 0 0 1
chr11:76659393|76659608 hsa-let-7e-5p 0 0 1
chr11:76659393|76659608 hsa-let-7e-3p 0 0 1
chr11:76659393|76659608 hsa-miR-98-5p 0 0 1
chr11:76659393|76659608 hsa-miR-98-3p 0 0 1
chr11:76659393|76659608 hsa-let-7g-5p 0 0 1
chr11:76659393|76659608 hsa-let-7g-3p 0 0 1
chr11:76659393|76659608 hsa-let-7i-5p 0 0 1
chr11:76659393|76659608 hsa-let-7i-3p 0 0 1
chr11:76659393|76659608 hsa-miR-186-5p 0 0 1
chr11:76659393|76659608 hsa-miR-186-3p 0 0 1
chr11:76659393|76659608 hsa-miR-370-5p 0 0 1
chr11:76659393|76659608 hsa-miR-370-3p 0 0 1
chr11:76659393|76659608 hsa-miR-377-5p 0 0 1
chr11:76659393|76659608 hsa-miR-377-3p 0 0 1
chr11:76659393|76659608 hsa-miR-345-5p 0 0 1
chr11:76659393|76659608 hsa-miR-345-3p 0 0 1
chr11:76659393|76659608 hsa-miR-202-5p 0 0 1
chr11:76659393|76659608 hsa-miR-202-3p 0 0 1
chr11:76659393|76659608 hsa-miR-625-5p 0 0 1
chr11:76659393|76659608 hsa-miR-625-3p 0 0 1
chr11:76659393|76659608 hsa-miR-939-5p 0 0 1
chr11:76659393|76659608 hsa-miR-939-3p 0 0 1
chr11:76659393|76659608 hsa-miR-1253 0 0 1
chr11:76659393|76659608 hsa-miR-1262 0 0 1
chr11:76659393|76659608 hsa-miR-1275 1 0 1
chr11:76659393|76659608 hsa-miR-1197 0 0 1
chr11:76659393|76659608 hsa-miR-671-5p 0 1 1
chr11:76659393|76659608 hsa-miR-1224-5p 0 1 1
chr11:76659393|76659608 hsa-miR-515-5p 0 0 1
chr11:76659393|76659608 hsa-miR-128 0 0 1
chr11:76659393|76659608 hsa-let-7a 0 0 1
chr11:76659393|76659608 hsa-let-7f 0 0 1
chr11:76659393|76659608 hsa-miR-1245 0 0 1
chr11:76659393|76659608 hsa-miR-2861 1 0 0
chr11:76659393|76659608 hsa-miR-3169 0 1 0
chr11:76659393|76659608 hsa-miR-4300 1 0 0
chr11:76659393|76659608 hsa-miR-3919 0 1 0
chr11:76659393|76659608 hsa-miR-4656 1 0 0
chr11:76659393|76659608 hsa-miR-4706 1 0 0
chr11:76659393|76659608 hsa-miR-5685 0 1 0
chr11:76659393|76659608 hsa-miR-5698 1 0 0
chr11:76659393|76659608 hsa-miR-5787 1 0 0
chr11:76659393|76659608 hsa-miR-6090 1 0 0
chr11:76659393|76659608 hsa-miR-12119 1 0 0
chr11:76659393|76659608 hsa-miR-128-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6840-3p 0 1 0
chr11:76659393|76659608 hsa-miR-4665-3p 1 0 0
chr11:76659393|76659608 hsa-miR-3150a-3p 1 0 0
chr11:76659393|76659608 hsa-miR-6833-5p 0 1 0
chr11:76659393|76659608 hsa-miR-6089 1 0 0
chr11:76659393|76659608 hsa-miR-6880-5p 1 0 0
chr11:76659393|76659608 hsa-miR-7847-3p 1 0 0
chr11:76659393|76659608 hsa-miR-6746-5p 1 0 0
chr11:76659393|76659608 hsa-miR-491-5p 1 0 0
chr11:76659393|76659608 hsa-miR-3190-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6827-5p 1 1 0
chr11:76659393|76659608 hsa-miR-6798-5p 1 0 0
chr11:76659393|76659608 hsa-miR-486-3p 1 0 0
chr11:76659393|76659608 hsa-miR-4793-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6786-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6852-5p 1 1 0
chr11:76659393|76659608 hsa-miR-4713-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6749-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6847-5p 0 1 0
chr11:76659393|76659608 hsa-miR-6824-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6802-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4640-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6781-5p 1 0 0
chr11:76659393|76659608 hsa-miR-194-3p 1 1 0
chr11:76659393|76659608 hsa-miR-4740-5p 0 1 0
chr11:76659393|76659608 hsa-miR-5010-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4727-3p 1 0 0
chr11:76659393|76659608 hsa-miR-5000-3p 0 1 0
chr11:76659393|76659608 hsa-miR-216a-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6856-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6886-3p 1 0 0
chr11:76659393|76659608 hsa-miR-6859-3p 0 1 0
chr11:76659393|76659608 hsa-miR-5197-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6769b-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6787-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6870-5p 1 1 0
chr11:76659393|76659608 hsa-miR-1343-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6726-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6756-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6803-5p 1 0 0
chr11:76659393|76659608 hsa-miR-10401-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6751-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6779-5p 1 0 0
chr11:76659393|76659608 hsa-miR-7111-5p 1 1 0
chr11:76659393|76659608 hsa-miR-3127-3p 0 1 0
chr11:76659393|76659608 hsa-miR-4685-3p 0 1 0
chr11:76659393|76659608 hsa-miR-328-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4726-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4745-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6795-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6846-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6848-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6887-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6889-5p 0 1 0
chr11:76659393|76659608 hsa-miR-4697-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4723-5p 1 1 0
chr11:76659393|76659608 hsa-miR-6845-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6885-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4758-5p 1 0 0
chr11:76659393|76659608 hsa-miR-5586-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6731-5p 1 0 0
chr11:76659393|76659608 hsa-miR-4665-5p 1 1 0
chr11:76659393|76659608 hsa-miR-550a-3-5p 1 0 0
chr11:76659393|76659608 hsa-miR-550a-5p 1 0 0
chr11:76659393|76659608 hsa-miR-6756-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6805-3p 1 0 0
chr11:76659393|76659608 hsa-miR-4690-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6824-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6843-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6764-3p 0 1 0
chr11:76659393|76659608 hsa-miR-6855-3p 0 1 0
chr11:76659393|76659608 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr11:76659393|76659608
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MMQQAAEKGVLGCNLETRVLGSRITV
Nucleotide Sequence CTGATGCAGCAGGCGGCAGAGAAAGGTGTCCTGGGCTGTAATTTGGAGACCAGAGTTCTGGGATCCCGGATCACTGTGTGA
CircID chr11:76659393|76659608
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MCDLESVLTLLCTSGSPTDLECLPASL
Nucleotide Sequence CTGTGTGACCTTGAGTCAGTCCTCACTCTTCTCTGTACCTCAGGCTCCCCCACTGACCTAGAGTGTCTCCCGGCTTCTTTA
CircID chr11:76659393|76659608
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MDPKCSPGRGSPTDAAGGRERCPGL
Nucleotide Sequence CTGGACCCAAAGTGCAGCCCGGGAAGGGGGTCACCCACTGATGCAGCAGGCGGCAGAGAAAGGTGTCCTGGGCTGTAA
CircID chr11:76659393|76659608
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MTQGHTVIRDPRTLVSKLQPRTPFSAACCISG
Nucleotide Sequence CTGACTCAAGGTCACACAGTGATCCGGGATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTGCCGCCTGCTGCATCAGTGGGTGA
CircID chr11:76659393|76659608
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MPPAASVGDPLPGLHFGSSCGSQKLG
Nucleotide Sequence CTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGTCCAGCTGTGGAAGCCAGAAGTTGGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab