CircRNA Information

General Information
circRNA Basic Information
CircID chr11:76957465|76998821
Strand +
CircType exon
Host Gene ENSG00000078124.11;
Algorism find_circ;CIRI2;CIRC
Sequence ATGGAGTCTCACTCTGTCGCCGAGGCTGAAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCATTTCCCAGGTTTACGCGATCCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGATCTATTTATATTGTTACATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr11:76957465|76998821
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MESHSVAEAEVQWHNLGSLQPPFPRFTRSFCLSLPSSWDYRSCMECWSLH*
Nucleotide Sequence ATGGAGTCTCACTCTGTCGCCGAGGCTGAAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCATTTCCCAGGTTTACGCGATCCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTCATGTATGGAATGTTGGTCTTTACATTAG

CircID chr11:76957465|76998821
ORF Type ORF2
Protein Length 60
Nucleotide Length 180
Protein Sequence WSLTLSPRLKCSGTISAHCNLHFPGLRDPSASASQVAGTTGHVWNVGLYISTSIYLYCYM
Nucleotide Sequence TGGAGTCTCACTCTGTCGCCGAGGCTGAAGTGCAGTGGCACAATCTCGGCTCACTGCAACCTCCATTTCCCAGGTTTACGCGATCCTTCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTCATGTATGGAATGTTGGTCTTTACATTAGTACTTCGATCTATTTATATTGTTACATG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr11:76957465|76998821 ELAVL1 3 0 0
chr11:76957465|76998821 FIP1L1 0 1 0
chr11:76957465|76998821 HNRNPC 0 0 1
chr11:76957465|76998821 FUS 1 1 1
chr11:76957465|76998821 U2AF2 2 0 4
chr11:76957465|76998821 NOP56 0 1 0
chr11:76957465|76998821 ZNF622 0 0 1
chr11:76957465|76998821 CSTF2 0 1 0
chr11:76957465|76998821 PRPF8 0 3 0
chr11:76957465|76998821 HNRNPK 0 1 0
chr11:76957465|76998821 UPF1 1 0 0
chr11:76957465|76998821 TAF15 1 0 0
chr11:76957465|76998821 HNRNPL 0 1 0
chr11:76957465|76998821 PCBP2 0 2 0
chr11:76957465|76998821 PTBP1 2 0 1
chr11:76957465|76998821 IGF2BP2 0 0 3
chr11:76957465|76998821 EIF4A3 0 1 0
chr11:76957465|76998821 AGO2 0 0 1