CircNet

General Information

circRNA Basic Information

CircID	chr11:77955942\|77981576
Strand	-
CircType	exon
Host Gene	ENSG00000149262.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATTATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTCATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr11:77955942\|77981576	hsa-miR-198	1	1
chr11:77955942\|77981576	hsa-miR-17-3p	1	1
chr11:77955942\|77981576	hsa-miR-124-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:77955942\|77981576
ORF Type	ORF1
Protein Length	196
Nucleotide Length	588
Protein Sequence	MDDAINILQNEKSHQVLAQLLDTLLAIGTKLPENQAIQMRLVDVACKHLTDTSHGVRNKCLQLLGNLGSLEKSVTKDAEGLAARDVQKIIGDYFSDQDPRVRTAAIKAMLQLHERGLKLHQTIYNQACKLLSDDYEQVRSAAVQLIWVVSQLYPESIVPIPSSNEEIRLVDDAFGKICHMVSDGSWVVRVQAAKLL
Nucleotide Sequence	ATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTCATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAAATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTTACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTG

CircID	chr11:77955942\|77981576
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MTMNKCAVLQSSLSGSSVSSILKALSQFLLLMKKYA*
Nucleotide Sequence	ATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAG

CircID	chr11:77955942\|77981576
ORF Type	ORF3
Protein Length	34
Nucleotide Length	102
Protein Sequence	MLMASSIMQSGENPAVFDNKPNNDAIFSLTDGSF
Nucleotide Sequence	ATGTTGATGGCATCATCCATAATGCAGTCTGGTGAAAATCCTGCTGTCTTTGATAATAAACCCAACAATGATGCAATTTTCAGTCTCACAGATGGATCATTC

CircID	chr11:77955942\|77981576
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MELQHGFYSCCSDTWVLVTEVIPYNLLDISGS*
Nucleotide Sequence	ATGGAGCTGCAACATGGCTTTTATAGCTGCTGTTCTGACACGTGGGTCTTGGTCACTGAAGTAATCCCCTATAATCTTCTGGACATCTCTGGCAGCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:77955942\|77981576	U2AF2	7	3	3
chr11:77955942\|77981576	MOV10	0	4	0
chr11:77955942\|77981576	ELAVL1	4	7	1
chr11:77955942\|77981576	SF3B4	2	0	0
chr11:77955942\|77981576	FAM120A	0	0	1
chr11:77955942\|77981576	WDR33	0	1	0
chr11:77955942\|77981576	CELF2	0	0	1
chr11:77955942\|77981576	PUM2	0	2	0
chr11:77955942\|77981576	IGF2BP1	0	0	2
chr11:77955942\|77981576	YTHDF1	0	6	0
chr11:77955942\|77981576	UPF1	2	1	0
chr11:77955942\|77981576	ZNF622	1	1	0
chr11:77955942\|77981576	TNRC6A	0	0	1
chr11:77955942\|77981576	FMR1	0	16	4
chr11:77955942\|77981576	CPSF6	0	1	0
chr11:77955942\|77981576	NUDT21	1	2	1
chr11:77955942\|77981576	GPKOW	0	1	1
chr11:77955942\|77981576	RBM15B	0	6	0
chr11:77955942\|77981576	XRCC6	0	0	1
chr11:77955942\|77981576	DGCR8	1	0	0
chr11:77955942\|77981576	SRSF7	2	0	0
chr11:77955942\|77981576	MTPAP	0	1	0
chr11:77955942\|77981576	SRSF1	0	0	5
chr11:77955942\|77981576	NOP58	1	1	4
chr11:77955942\|77981576	U2AF1	0	0	5
chr11:77955942\|77981576	ADAR	0	1	0
chr11:77955942\|77981576	NOP56	1	0	1
chr11:77955942\|77981576	SRSF9	0	0	1
chr11:77955942\|77981576	DDX54	0	0	10
chr11:77955942\|77981576	GRWD1	2	0	1
chr11:77955942\|77981576	RBM15	0	4	1
chr11:77955942\|77981576	FIP1L1	0	1	0
chr11:77955942\|77981576	PTBP1	1	0	1
chr11:77955942\|77981576	HNRNPC	1	9	2
chr11:77955942\|77981576	TRA2A	0	0	6
chr11:77955942\|77981576	ATXN2	0	9	0
chr11:77955942\|77981576	HNRNPA1	0	1	0
chr11:77955942\|77981576	DDX3X	4	14	0
chr11:77955942\|77981576	ZC3H7B	0	12	0
chr11:77955942\|77981576	ACIN1	0	0	4
chr11:77955942\|77981576	LIN28B	2	11	4
chr11:77955942\|77981576	RANGAP1	0	1	0
chr11:77955942\|77981576	FXR1	0	0	1
chr11:77955942\|77981576	FXR2	0	0	3
chr11:77955942\|77981576	UCHL5	0	4	4
chr11:77955942\|77981576	IGF2BP3	0	0	2
chr11:77955942\|77981576	IGF2BP2	1	1	5
chr11:77955942\|77981576	TARDBP	1	19	0
chr11:77955942\|77981576	YTHDC1	0	19	0
chr11:77955942\|77981576	ALKBH5	0	1	0
chr11:77955942\|77981576	BUD13	0	0	4
chr11:77955942\|77981576	RBFOX2	1	0	0
chr11:77955942\|77981576	PRPF8	0	1	0
chr11:77955942\|77981576	YTHDF2	0	2	0
chr11:77955942\|77981576	RBM47	0	1	0
chr11:77955942\|77981576	CSTF2T	0	2	3
chr11:77955942\|77981576	BCCIP	0	0	1
chr11:77955942\|77981576	CSTF2	1	6	1
chr11:77955942\|77981576	FUS	0	4	0
chr11:77955942\|77981576	CPSF7	0	5	0
chr11:77955942\|77981576	YBX3	0	4	0
chr11:77955942\|77981576	TIAL1	1	2	0
chr11:77955942\|77981576	AGO2	0	0	2
chr11:77955942\|77981576	XRN2	0	1	0
chr11:77955942\|77981576	EWSR1	1	5	0
chr11:77955942\|77981576	EIF4A3	2	0	11
chr11:77955942\|77981576	FBL	0	0	3

CircRNA Information