CircRNA Information

General Information
circRNA Basic Information
CircID chr11:78218042|78218261
Strand -
CircType exon
Host Gene ENSG00000033327.11;
Algorism CIRI2;
Sequence CCCCAAGGATTGCGTTGGGCACCCCCCAACTCCCAGGCCCTTTGGATGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCCCGACCCCACTGCAGAGTCCCCTGCACTGCCCTGTGCCTCTGCCCAGCCTGTGCCTGTCCCAGGGTTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:78218042|78218261 hsa-let-7b-5p 0 0 1
chr11:78218042|78218261 hsa-let-7b-3p 0 0 1
chr11:78218042|78218261 hsa-let-7c-5p 0 0 1
chr11:78218042|78218261 hsa-let-7c-3p 0 0 1
chr11:78218042|78218261 hsa-let-7d-5p 0 0 1
chr11:78218042|78218261 hsa-let-7d-3p 0 0 1
chr11:78218042|78218261 hsa-let-7e-5p 0 0 1
chr11:78218042|78218261 hsa-let-7e-3p 0 0 1
chr11:78218042|78218261 hsa-miR-98-5p 0 0 1
chr11:78218042|78218261 hsa-miR-98-3p 0 0 1
chr11:78218042|78218261 hsa-miR-148a-5p 0 0 1
chr11:78218042|78218261 hsa-miR-148a-3p 0 0 1
chr11:78218042|78218261 hsa-miR-34a-5p 0 0 1
chr11:78218042|78218261 hsa-miR-34a-3p 0 0 1
chr11:78218042|78218261 hsa-let-7g-5p 0 0 1
chr11:78218042|78218261 hsa-let-7g-3p 0 0 1
chr11:78218042|78218261 hsa-let-7i-5p 0 0 1
chr11:78218042|78218261 hsa-let-7i-3p 0 0 1
chr11:78218042|78218261 hsa-miR-152-5p 0 0 1
chr11:78218042|78218261 hsa-miR-152-3p 0 0 1
chr11:78218042|78218261 hsa-miR-148b-5p 0 0 1
chr11:78218042|78218261 hsa-miR-148b-3p 0 0 1
chr11:78218042|78218261 hsa-miR-449a 0 0 1
chr11:78218042|78218261 hsa-miR-571 0 0 1
chr11:78218042|78218261 hsa-miR-612 0 0 1
chr11:78218042|78218261 hsa-miR-661 0 0 1
chr11:78218042|78218261 hsa-miR-449b-5p 0 0 1
chr11:78218042|78218261 hsa-miR-449b-3p 0 0 1
chr11:78218042|78218261 hsa-miR-1205 0 0 1
chr11:78218042|78218261 hsa-miR-1275 0 0 1
chr11:78218042|78218261 hsa-miR-1324 0 0 1
chr11:78218042|78218261 hsa-miR-491-5p 1 0 1
chr11:78218042|78218261 hsa-miR-615-5p 1 0 1
chr11:78218042|78218261 hsa-miR-1184 0 0 1
chr11:78218042|78218261 hsa-miR-576-3p 0 0 1
chr11:78218042|78218261 hsa-miR-342-5p 0 0 1
chr11:78218042|78218261 hsa-miR-362-5p 0 0 1
chr11:78218042|78218261 hsa-miR-1302 0 0 1
chr11:78218042|78218261 hsa-miR-34c-5p 0 0 1
chr11:78218042|78218261 hsa-miR-886-5p 0 0 1
chr11:78218042|78218261 hsa-miR-220c 0 0 1
chr11:78218042|78218261 hsa-let-7a 0 0 1
chr11:78218042|78218261 hsa-let-7f 0 0 1
chr11:78218042|78218261 hsa-miR-500 0 0 1
chr11:78218042|78218261 hsa-miR-1285 0 0 1
chr11:78218042|78218261 hsa-miR-564 1 0 0
chr11:78218042|78218261 hsa-miR-762 1 0 0
chr11:78218042|78218261 hsa-miR-760 1 0 0
chr11:78218042|78218261 hsa-miR-1268a 1 0 0
chr11:78218042|78218261 hsa-miR-2278 1 0 0
chr11:78218042|78218261 hsa-miR-2861 1 1 0
chr11:78218042|78218261 hsa-miR-3132 1 0 0
chr11:78218042|78218261 hsa-miR-3138 1 0 0
chr11:78218042|78218261 hsa-miR-3147 1 1 0
chr11:78218042|78218261 hsa-miR-3155a 1 0 0
chr11:78218042|78218261 hsa-miR-3170 1 0 0
chr11:78218042|78218261 hsa-miR-3174 0 1 0
chr11:78218042|78218261 hsa-miR-3175 1 0 0
chr11:78218042|78218261 hsa-miR-3197 1 1 0
chr11:78218042|78218261 hsa-miR-4298 1 1 0
chr11:78218042|78218261 hsa-miR-4257 0 1 0
chr11:78218042|78218261 hsa-miR-4259 1 1 0
chr11:78218042|78218261 hsa-miR-4253 1 0 0
chr11:78218042|78218261 hsa-miR-4269 0 1 0
chr11:78218042|78218261 hsa-miR-4292 0 1 0
chr11:78218042|78218261 hsa-miR-3661 1 0 0
chr11:78218042|78218261 hsa-miR-3937 1 0 0
chr11:78218042|78218261 hsa-miR-3945 1 0 0
chr11:78218042|78218261 hsa-miR-1268b 1 0 0
chr11:78218042|78218261 hsa-miR-4438 0 1 0
chr11:78218042|78218261 hsa-miR-4466 1 0 0
chr11:78218042|78218261 hsa-miR-3155b 1 0 0
chr11:78218042|78218261 hsa-miR-4492 1 0 0
chr11:78218042|78218261 hsa-miR-4497 1 0 0
chr11:78218042|78218261 hsa-miR-4498 1 0 0
chr11:78218042|78218261 hsa-miR-4505 1 1 0
chr11:78218042|78218261 hsa-miR-4519 0 1 0
chr11:78218042|78218261 hsa-miR-4522 0 1 0
chr11:78218042|78218261 hsa-miR-3960 1 0 0
chr11:78218042|78218261 hsa-miR-4651 1 0 0
chr11:78218042|78218261 hsa-miR-4654 1 0 0
chr11:78218042|78218261 hsa-miR-4656 1 0 0
chr11:78218042|78218261 hsa-miR-4657 1 1 0
chr11:78218042|78218261 hsa-miR-4674 1 0 0
chr11:78218042|78218261 hsa-miR-4688 1 0 0
chr11:78218042|78218261 hsa-miR-4706 1 0 0
chr11:78218042|78218261 hsa-miR-4710 1 0 0
chr11:78218042|78218261 hsa-miR-5090 1 0 0
chr11:78218042|78218261 hsa-miR-5698 1 0 0
chr11:78218042|78218261 hsa-miR-5787 1 0 0
chr11:78218042|78218261 hsa-miR-6081 1 1 0
chr11:78218042|78218261 hsa-miR-6085 1 0 0
chr11:78218042|78218261 hsa-miR-6086 1 0 0
chr11:78218042|78218261 hsa-miR-6127 1 0 0
chr11:78218042|78218261 hsa-miR-6129 1 0 0
chr11:78218042|78218261 hsa-miR-6134 1 0 0
chr11:78218042|78218261 hsa-miR-6860 1 1 0
chr11:78218042|78218261 hsa-miR-7704 1 0 0
chr11:78218042|78218261 hsa-miR-8072 1 0 0
chr11:78218042|78218261 hsa-miR-8089 1 0 0
chr11:78218042|78218261 hsa-miR-12115 1 0 0
chr11:78218042|78218261 hsa-miR-150-3p 1 0 0
chr11:78218042|78218261 hsa-miR-92a-1-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7155-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6861-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6825-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6799-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6833-5p 1 0 0
chr11:78218042|78218261 hsa-miR-3622a-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7851-3p 1 0 0
chr11:78218042|78218261 hsa-miR-6089 1 0 0
chr11:78218042|78218261 hsa-miR-6880-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7847-3p 1 0 0
chr11:78218042|78218261 hsa-miR-4695-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6721-5p 1 1 0
chr11:78218042|78218261 hsa-miR-197-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7845-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6742-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6871-5p 1 0 0
chr11:78218042|78218261 hsa-miR-3151-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1292-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6793-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6796-5p 1 0 0
chr11:78218042|78218261 hsa-miR-3190-3p 1 1 0
chr11:78218042|78218261 hsa-miR-6798-5p 1 0 0
chr11:78218042|78218261 hsa-miR-486-3p 1 0 0
chr11:78218042|78218261 hsa-miR-2467-3p 1 1 0
chr11:78218042|78218261 hsa-miR-6782-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6810-5p 1 0 0
chr11:78218042|78218261 hsa-miR-5008-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6786-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1226-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1229-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4640-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1228-5p 1 0 0
chr11:78218042|78218261 hsa-miR-296-3p 1 0 0
chr11:78218042|78218261 hsa-miR-6771-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4690-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6823-5p 1 0 0
chr11:78218042|78218261 hsa-miR-92b-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6516-5p 0 1 0
chr11:78218042|78218261 hsa-miR-4732-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6749-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6847-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4787-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4446-3p 1 0 0
chr11:78218042|78218261 hsa-miR-149-3p 1 0 0
chr11:78218042|78218261 hsa-miR-3162-5p 1 0 0
chr11:78218042|78218261 hsa-miR-574-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7112-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6869-5p 1 0 0
chr11:78218042|78218261 hsa-miR-423-5p 1 0 0
chr11:78218042|78218261 hsa-let-7f-5p 1 1 0
chr11:78218042|78218261 hsa-let-7a-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6499-5p 1 0 0
chr11:78218042|78218261 hsa-miR-519d-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4746-3p 1 0 0
chr11:78218042|78218261 hsa-miR-4750-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6868-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1207-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1233-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4763-3p 1 0 0
chr11:78218042|78218261 hsa-miR-6778-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6812-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6865-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6870-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6775-5p 1 0 0
chr11:78218042|78218261 hsa-miR-5001-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6726-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6743-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6752-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6756-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6803-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6819-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6851-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7107-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1249-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6722-3p 1 1 0
chr11:78218042|78218261 hsa-miR-6763-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6774-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6779-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6879-5p 1 1 0
chr11:78218042|78218261 hsa-miR-7111-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4728-5p 1 0 0
chr11:78218042|78218261 hsa-miR-5189-5p 1 1 0
chr11:78218042|78218261 hsa-miR-5196-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6780b-5p 1 0 0
chr11:78218042|78218261 hsa-miR-10396b-5p 1 0 0
chr11:78218042|78218261 hsa-miR-1909-3p 1 0 0
chr11:78218042|78218261 hsa-miR-4632-5p 1 1 0
chr11:78218042|78218261 hsa-miR-4725-3p 1 0 0
chr11:78218042|78218261 hsa-miR-4745-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6735-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6777-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6794-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6846-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6848-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6889-5p 1 0 0
chr11:78218042|78218261 hsa-miR-3187-5p 0 1 0
chr11:78218042|78218261 hsa-miR-4436b-3p 0 1 0
chr11:78218042|78218261 hsa-miR-6831-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6885-5p 1 0 0
chr11:78218042|78218261 hsa-miR-939-5p 1 0 0
chr11:78218042|78218261 hsa-miR-365a-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6511a-5p 1 1 0
chr11:78218042|78218261 hsa-miR-6511b-5p 1 0 0
chr11:78218042|78218261 hsa-miR-3940-5p 1 0 0
chr11:78218042|78218261 hsa-miR-4664-5p 1 1 0
chr11:78218042|78218261 hsa-miR-1914-3p 1 0 0
chr11:78218042|78218261 hsa-miR-6855-5p 1 0 0
chr11:78218042|78218261 hsa-miR-7151-3p 1 0 0
chr11:78218042|78218261 hsa-miR-4472 1 0 0
chr11:78218042|78218261 hsa-miR-541-3p 1 0 0
chr11:78218042|78218261 hsa-miR-6791-5p 1 1 0
chr11:78218042|78218261 hsa-miR-619-5p 1 0 0
chr11:78218042|78218261 hsa-miR-3619-5p 1 0 0
chr11:78218042|78218261 hsa-miR-6715b-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr11:78218042|78218261
ORF Type ORF1
Protein Length 70
Nucleotide Length 210
Protein Sequence MRWAPPNSQALWMYFPTCYMAFTTASHLSATSVPDFHCTAHCKETHFPTPLQSPLHCPVPLPSLCLSQGS
Nucleotide Sequence TTGCGTTGGGCACCCCCCAACTCCCAGGCCCTTTGGATGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCCCGACCCCACTGCAGAGTCCCCTGCACTGCCCTGTGCCTCTGCCCAGCCTGTGCCTGTCCCAGGGTTCC
CircID chr11:78218042|78218261
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MLHICLLPLCPTSTALLTAKKLTSRPHCRVPCTALCLCPACACPRVP
Nucleotide Sequence CTGCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCCCGACCCCACTGCAGAGTCCCCTGCACTGCCCTGTGCCTCTGCCCAGCCTGTGCCTGTCCCAGGGTTCCC
CircID chr11:78218042|78218261
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MGTPQLPGPLDVFPHLLHGLHHCFTSVCYLCARLPLHCSLQRNSLPDPTAESPALPCASAQPVPVPGF
Nucleotide Sequence TTGGGCACCCCCCAACTCCCAGGCCCTTTGGATGTATTTCCCCACTTGCTACATGGCCTTCACCACTGCTTCACATCTGTCTGCTACCTCTGTGCCCGACTTCCACTGCACTGCTCACTGCAAAGAAACTCACTTCCCGACCCCACTGCAGAGTCCCCTGCACTGCCCTGTGCCTCTGCCCAGCCTGTGCCTGTCCCAGGGTTC
CircID chr11:78218042|78218261
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MGQAQAGQRHRAVQGTLQWGREVSFFAVSSAVEVGHRGSRQM
Nucleotide Sequence CTGGGACAGGCACAGGCTGGGCAGAGGCACAGGGCAGTGCAGGGGACTCTGCAGTGGGGTCGGGAAGTGAGTTTCTTTGCAGTGAGCAGTGCAGTGGAAGTCGGGCACAGAGGTAGCAGACAGATGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab