CircNet

General Information

circRNA Basic Information

CircID	chr11:78465876\|78571444
Strand	-
CircType	exon
Host Gene	ENSG00000137513.9;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGATGGATTCGTTCTGTCCGATCCCAGAAGGAAGTCTTGTTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAAATTTTGGGAGTTCTGTGGAAGTACAAGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAATTGTGATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAACGTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:78465876\|78571444
ORF Type	ORF1
Protein Length	82
Nucleotide Length	246
Protein Sequence	MNSSCRFTANPQYRTQNVSPTPKVRILSQILQRMPLFIFDGEILGITISNNFNFFCLQFHILPFGWTFYQLPLYFHRTPKI*
Nucleotide Sequence	ATGAATAGCAGCTGTCGCTTCACTGCGAATCCTCAATATAGAACCCAGAACGTTAGTCCTACACCTAAAGTGAGGATATTGTCGCAGATACTCCAGAGGATGCCTCTCTTTATATTTGATGGGGAAATCCTTGGCATCACAATTTCCAATAACTTTAATTTTTTCTGCCTTCAGTTCCACATTTTGCCTTTTGGATGGACTTTTTATCAGCTGCCCTTGTACTTCCACAGAACTCCCAAAATTTAA

CircID	chr11:78465876\|78571444
ORF Type	ORF2
Protein Length	112
Nucleotide Length	336
Protein Sequence	LFLHVNDGSSLESLQVVADSGLDSRELNFGSSVEVQGQLIKSPSKRQNVELKAEKIKVIGNCDAKDFPIKYKERHPLEYLRQYPHFRCRTNVLGSILRIRSEATAAIHSFFK
Nucleotide Sequence	TTGTTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCAGGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAAATTTTGGGAGTTCTGTGGAAGTACAAGGGCAGCTGATAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAATTGTGATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAACGTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAG

CircID	chr11:78465876\|78571444
ORF Type	ORF3
Protein Length	55
Nucleotide Length	165
Protein Sequence	MDFLSAALVLPQNSQNLILYCQGLNLQQPEGFPKMTHHLHAGTRLPSGIGQNESI
Nucleotide Sequence	ATGGACTTTTTATCAGCTGCCCTTGTACTTCCACAGAACTCCCAAAATTTAATTCTCTACTGTCAAGGCCTGAATCTGCAACAACCTGAAGGCTTTCCAAAGATGACCCATCATTTACATGCAGGAACAAGACTTCCTTCTGGGATCGGACAGAACGAATCCATC

CircID	chr11:78465876\|78571444
ORF Type	ORF4
Protein Length	55
Nucleotide Length	165
Protein Sequence	MGKSLASQFPITLIFSAFSSTFCLLDGLFISCPCTSTELPKFNSLLSRPESATT*
Nucleotide Sequence	ATGGGGAAATCCTTGGCATCACAATTTCCAATAACTTTAATTTTTTCTGCCTTCAGTTCCACATTTTGCCTTTTGGATGGACTTTTTATCAGCTGCCCTTGTACTTCCACAGAACTCCCAAAATTTAATTCTCTACTGTCAAGGCCTGAATCTGCAACAACCTGA

CircID	chr11:78465876\|78571444
ORF Type	ORF5
Protein Length	35
Nucleotide Length	105
Protein Sequence	MPRISPSNIKRGILWSICDNILTLGVGLTFWVLY*
Nucleotide Sequence	ATGCCAAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTATCTGCGACAATATCCTCACTTTAGGTGTAGGACTAACGTTCTGGGTTCTATATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:78465876\|78571444	U2AF2	4	3	1
chr11:78465876\|78571444	MOV10	0	0	1
chr11:78465876\|78571444	ELAVL1	0	3	0
chr11:78465876\|78571444	CELF2	0	1	0
chr11:78465876\|78571444	PRPF8	0	3	0
chr11:78465876\|78571444	UPF1	1	0	0
chr11:78465876\|78571444	FUS	1	0	0
chr11:78465876\|78571444	NOP58	1	0	4
chr11:78465876\|78571444	NOP56	0	1	1
chr11:78465876\|78571444	DDX54	0	1	8
chr11:78465876\|78571444	RBM10	0	2	0
chr11:78465876\|78571444	FIP1L1	0	1	0
chr11:78465876\|78571444	PTBP1	0	4	0
chr11:78465876\|78571444	HNRNPC	1	0	0
chr11:78465876\|78571444	LARP7	0	1	0
chr11:78465876\|78571444	ACIN1	0	0	2
chr11:78465876\|78571444	LIN28B	0	0	2
chr11:78465876\|78571444	IGF2BP3	0	1	1
chr11:78465876\|78571444	IGF2BP2	0	1	2
chr11:78465876\|78571444	TARDBP	0	1	0
chr11:78465876\|78571444	YTHDC1	0	0	1
chr11:78465876\|78571444	CSTF2T	0	2	1
chr11:78465876\|78571444	FBL	0	1	0
chr11:78465876\|78571444	EIF4A3	0	3	7
chr11:78465876\|78571444	AGO2	0	0	1

CircRNA Information