CircNet

General Information

circRNA Basic Information

CircID	chr11:83466708\|83472777
Strand	-
CircType	exon
Host Gene	ENSG00000150672.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGGACAAGAAGACCTCATTCTTTCCTATGAGCCTGTTACAAGGCAGGAAATAAACTACACCCGGCCGGTGATTATCCTGGGGCCCATGAAGGATCGGATCAATGACGACTTGATATCTGAATTCCCTGATAAATTTGGCTCCTGTGTGCCTCATACTACGAGGCCAAAGCGAGACTACGAGGTGGATGGCAGAGACTATCACTTTGTCATTTCCAGAGAACAAATGGAGAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGGCCAGTACAATGACAATTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGATGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGCCCAGCTCTATCCCATTGCCATCTTCATAAAACCCAGGTCTCTGGAACCTCTTAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:83466708\|83472777
ORF Type	ORF1
Protein Length	116
Nucleotide Length	348
Protein Sequence	MKDRINDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVISREQMEKDIQEHKFIEAGQYNDNLYGTSVQSVRFVAERGKHCILDVSGNAIKRLQVAQLYPIAIFIKPRSLEPL
Nucleotide Sequence	ATGAAGGATCGGATCAATGACGACTTGATATCTGAATTCCCTGATAAATTTGGCTCCTGTGTGCCTCATACTACGAGGCCAAAGCGAGACTACGAGGTGGATGGCAGAGACTATCACTTTGTCATTTCCAGAGAACAAATGGAGAAAGATATCCAAGAGCACAAGTTTATAGAAGCCGGCCAGTACAATGACAATTTATATGGAACCAGTGTGCAGTCTGTGAGATTTGTAGCAGAAAGAGGCAAACACTGTATACTTGATGTATCAGGAAATGCTATCAAGCGGTTACAAGTTGCCCAGCTCTATCCCATTGCCATCTTCATAAAACCCAGGTCTCTGGAACCTCTT

CircID	chr11:83466708\|83472777
ORF Type	ORF2
Protein Length	51
Nucleotide Length	153
Protein Sequence	MRHTGAKFIREFRYQVVIDPILHGPQDNHRPGVVYFLPCNRLIGKNEVFLS
Nucleotide Sequence	ATGAGGCACACAGGAGCCAAATTTATCAGGGAATTCAGATATCAAGTCGTCATTGATCCGATCCTTCATGGGCCCCAGGATAATCACCGGCCGGGTGTAGTTTATTTCCTGCCTTGTAACAGGCTCATAGGAAAGAATGAGGTCTTCTTGTCC

CircID	chr11:83466708\|83472777
ORF Type	ORF3
Protein Length	56
Nucleotide Length	168
Protein Sequence	LIAFPDTSSIQCLPLSATNLTDCTLVPYKLSLYWPASINLCSWISFSICSLEMTK*
Nucleotide Sequence	TTGATAGCATTTCCTGATACATCAAGTATACAGTGTTTGCCTCTTTCTGCTACAAATCTCACAGACTGCACACTGGTTCCATATAAATTGTCATTGTACTGGCCGGCTTCTATAAACTTGTGCTCTTGGATATCTTTCTCCATTTGTTCTCTGGAAATGACAAAGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:83466708\|83472777	KHSRP	2	3	0
chr11:83466708\|83472777	ELAVL1	1	4	0
chr11:83466708\|83472777	ELAVL3	0	1	0
chr11:83466708\|83472777	CNBP	0	1	0
chr11:83466708\|83472777	YTHDF1	1	1	0
chr11:83466708\|83472777	CAPRIN1	1	0	0
chr11:83466708\|83472777	CPSF7	2	3	1
chr11:83466708\|83472777	NUDT21	0	1	0
chr11:83466708\|83472777	RBM15B	0	1	0
chr11:83466708\|83472777	U2AF1	0	1	0
chr11:83466708\|83472777	U2AF2	6	17	0
chr11:83466708\|83472777	GRWD1	1	0	0
chr11:83466708\|83472777	FIP1L1	1	0	0
chr11:83466708\|83472777	PTBP1	2	1	0
chr11:83466708\|83472777	HNRNPC	4	7	0
chr11:83466708\|83472777	HNRNPD	0	1	0
chr11:83466708\|83472777	ACIN1	0	0	4
chr11:83466708\|83472777	DDX3X	1	4	0
chr11:83466708\|83472777	HNRNPA1	1	0	0
chr11:83466708\|83472777	LIN28B	1	1	1
chr11:83466708\|83472777	LIN28A	1	0	0
chr11:83466708\|83472777	IGF2BP3	0	1	0
chr11:83466708\|83472777	TARDBP	0	1	0
chr11:83466708\|83472777	YTHDC1	2	2	0
chr11:83466708\|83472777	BUD13	0	1	0
chr11:83466708\|83472777	YTHDF2	0	1	0
chr11:83466708\|83472777	CSTF2T	1	1	0
chr11:83466708\|83472777	CSTF2	12	1	0
chr11:83466708\|83472777	WDR33	1	0	0
chr11:83466708\|83472777	DKC1	0	1	0
chr11:83466708\|83472777	EIF4A3	1	0	1
chr11:83466708\|83472777	AGO2	1	0	1

CircRNA Information