CircRNA Information

General Information
circRNA Basic Information
CircID chr11:85996826|86003451
Strand -
CircType exon
Host Gene ENSG00000073921.17;
Algorism find_circ;CIRI2;DCC;
Sequence GCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:85996826|86003451 hsa-miR-22-5p 0 0 1
chr11:85996826|86003451 hsa-miR-22-3p 0 0 1
chr11:85996826|86003451 hsa-miR-31-5p 0 0 1
chr11:85996826|86003451 hsa-miR-31-3p 0 0 1
chr11:85996826|86003451 hsa-miR-107 0 1 1
chr11:85996826|86003451 hsa-miR-214-5p 0 0 1
chr11:85996826|86003451 hsa-miR-214-3p 0 0 1
chr11:85996826|86003451 hsa-miR-217-5p 0 1 1
chr11:85996826|86003451 hsa-miR-217-3p 0 1 1
chr11:85996826|86003451 hsa-miR-320a-5p 0 0 1
chr11:85996826|86003451 hsa-miR-320a-3p 0 0 1
chr11:85996826|86003451 hsa-miR-488-5p 0 0 1
chr11:85996826|86003451 hsa-miR-488-3p 0 0 1
chr11:85996826|86003451 hsa-miR-489-5p 0 0 1
chr11:85996826|86003451 hsa-miR-489-3p 0 0 1
chr11:85996826|86003451 hsa-miR-526b-5p 0 0 1
chr11:85996826|86003451 hsa-miR-526b-3p 0 0 1
chr11:85996826|86003451 hsa-miR-518f-5p 0 0 1
chr11:85996826|86003451 hsa-miR-518f-3p 0 0 1
chr11:85996826|86003451 hsa-miR-518b 0 0 1
chr11:85996826|86003451 hsa-miR-518c-5p 0 0 1
chr11:85996826|86003451 hsa-miR-518c-3p 0 0 1
chr11:85996826|86003451 hsa-miR-520g-5p 0 0 1
chr11:85996826|86003451 hsa-miR-520g-3p 0 0 1
chr11:85996826|86003451 hsa-miR-520h 0 0 1
chr11:85996826|86003451 hsa-miR-527 0 0 1
chr11:85996826|86003451 hsa-miR-505-5p 0 0 1
chr11:85996826|86003451 hsa-miR-505-3p 0 0 1
chr11:85996826|86003451 hsa-miR-601 0 0 1
chr11:85996826|86003451 hsa-miR-1301-5p 0 0 1
chr11:85996826|86003451 hsa-miR-1301-3p 0 0 1
chr11:85996826|86003451 hsa-miR-877-5p 0 0 1
chr11:85996826|86003451 hsa-miR-877-3p 0 0 1
chr11:85996826|86003451 hsa-miR-922 0 0 1
chr11:85996826|86003451 hsa-miR-939-5p 0 0 1
chr11:85996826|86003451 hsa-miR-939-3p 0 0 1
chr11:85996826|86003451 hsa-miR-1226-5p 0 0 1
chr11:85996826|86003451 hsa-miR-1226-3p 0 0 1
chr11:85996826|86003451 hsa-miR-1255a 0 0 1
chr11:85996826|86003451 hsa-miR-1266-5p 0 0 1
chr11:85996826|86003451 hsa-miR-1266-3p 0 0 1
chr11:85996826|86003451 hsa-miR-1252-5p 0 0 1
chr11:85996826|86003451 hsa-miR-1252-3p 0 0 1
chr11:85996826|86003451 hsa-miR-139-5p 0 0 1
chr11:85996826|86003451 hsa-miR-486-5p 0 0 1
chr11:85996826|86003451 hsa-miR-767-5p 0 0 1
chr11:85996826|86003451 hsa-miR-1184 0 0 1
chr11:85996826|86003451 hsa-miR-330-3p 0 0 1
chr11:85996826|86003451 hsa-miR-875-5p 0 0 1
chr11:85996826|86003451 hsa-miR-502-5p 0 0 1
chr11:85996826|86003451 hsa-miR-320b 0 0 1
chr11:85996826|86003451 hsa-miR-320c 0 0 1
chr11:85996826|86003451 hsa-miR-320d 0 0 1
chr11:85996826|86003451 hsa-miR-509-3-5p 0 0 1
chr11:85996826|86003451 hsa-miR-509-5p 0 0 1
chr11:85996826|86003451 hsa-miR-518a-5p 0 0 1
chr11:85996826|86003451 hsa-miR-518a-3p 0 0 1
chr11:85996826|86003451 hsa-miR-518d-3p 0 0 1
chr11:85996826|86003451 hsa-miR-516a-3p 0 1 1
chr11:85996826|86003451 hsa-miR-1274a 0 0 1
chr11:85996826|86003451 hsa-miR-103 0 0 1
chr11:85996826|86003451 hsa-miR-1255b 0 0 1
chr11:85996826|86003451 hsa-miR-761 0 1 0
chr11:85996826|86003451 hsa-miR-3128 0 1 0
chr11:85996826|86003451 hsa-miR-3132 1 0 0
chr11:85996826|86003451 hsa-miR-3154 1 0 0
chr11:85996826|86003451 hsa-miR-3916 0 1 0
chr11:85996826|86003451 hsa-miR-4514 0 1 0
chr11:85996826|86003451 hsa-miR-4706 1 0 0
chr11:85996826|86003451 hsa-miR-4779 0 1 0
chr11:85996826|86003451 hsa-miR-5707 0 1 0
chr11:85996826|86003451 hsa-miR-6081 1 0 0
chr11:85996826|86003451 hsa-miR-6165 0 1 0
chr11:85996826|86003451 hsa-miR-12115 1 0 0
chr11:85996826|86003451 hsa-miR-12120 0 1 0
chr11:85996826|86003451 hsa-miR-4695-5p 1 0 0
chr11:85996826|86003451 hsa-miR-6746-5p 1 0 0
chr11:85996826|86003451 hsa-miR-4722-5p 1 1 0
chr11:85996826|86003451 hsa-miR-593-5p 1 0 0
chr11:85996826|86003451 hsa-miR-197-5p 1 0 0
chr11:85996826|86003451 hsa-miR-6760-5p 1 0 0
chr11:85996826|86003451 hsa-miR-3130-3p 0 1 0
chr11:85996826|86003451 hsa-miR-4711-3p 0 1 0
chr11:85996826|86003451 hsa-miR-6882-3p 1 0 0
chr11:85996826|86003451 hsa-miR-7109-3p 1 0 0
chr11:85996826|86003451 hsa-miR-3691-5p 0 1 0
chr11:85996826|86003451 hsa-miR-3202 0 1 0
chr11:85996826|86003451 hsa-miR-103a-3p 0 1 0
chr11:85996826|86003451 hsa-miR-7156-3p 0 1 0
chr11:85996826|86003451 hsa-miR-2276-3p 0 1 0
chr11:85996826|86003451 hsa-let-7c-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6499-3p 0 1 0
chr11:85996826|86003451 hsa-miR-6720-3p 1 1 0
chr11:85996826|86003451 hsa-miR-4773 0 1 0
chr11:85996826|86003451 hsa-miR-7151-5p 1 0 0
chr11:85996826|86003451 hsa-miR-34a-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6800-3p 1 0 0
chr11:85996826|86003451 hsa-miR-15a-5p 0 1 0
chr11:85996826|86003451 hsa-miR-15b-5p 0 1 0
chr11:85996826|86003451 hsa-miR-1249-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6780a-5p 1 1 0
chr11:85996826|86003451 hsa-miR-6797-5p 1 1 0
chr11:85996826|86003451 hsa-miR-1909-3p 1 0 0
chr11:85996826|86003451 hsa-miR-6858-5p 1 0 0
chr11:85996826|86003451 hsa-miR-6511b-5p 1 0 0
chr11:85996826|86003451 hsa-miR-6876-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6750-5p 1 0 0
chr11:85996826|86003451 hsa-miR-6849-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6753-3p 0 1 0
chr11:85996826|86003451 hsa-miR-9851-3p 1 0 0
chr11:85996826|86003451 hsa-miR-6819-3p 0 1 0
chr11:85996826|86003451 hsa-miR-6823-3p 1 0 0
chr11:85996826|86003451 hsa-miR-6744-3p 1 1 0
chr11:85996826|86003451 hsa-miR-3619-5p 1 1 0
chr11:85996826|86003451 hsa-miR-6781-3p 1 1 0
chr11:85996826|86003451 hsa-miR-6827-3p 1 0 0
chr11:85996826|86003451 hsa-miR-6715b-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6733-5p 0 1 0
chr11:85996826|86003451 hsa-miR-6835-3p 0 1 0
chr11:85996826|86003451 hsa-miR-516b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr11:85996826|86003451
ORF Type ORF1
Protein Length 72
Nucleotide Length 219
Protein Sequence MVQSLSLLLRWIQERLQLLKRYEVSLQVLLGAVPLKLSNVPVLPLMLPAFPFHPLWSEIDQCLPGKTLHWKV
Nucleotide Sequence CTGGTGCAGTCATTATCCCTCCTGCTGAGGTGGATACAGGAGAGGCTGCAGTTGTTAAAGAGGTATGAGGTTTCTTTGCAAGTTCTTTTAGGCGCTGTTCCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGCTGCCTGCTTTTCCCTTTCATCCACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAG

CircID chr11:85996826|86003451
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MGSFDVLLEELGVENMSMAGAVIIPPAEVDTGEAAVVKEV
Nucleotide Sequence TTGGGCAGCTTTGATGTGCTGTTAGAAGAACTAGGGGTAGAAAATATGTCAATGGCTGGTGCAGTCATTATCCCTCCTGCTGAGGTGGATACAGGAGAGGCTGCAGTTGTTAAAGAGGTATGA

CircID chr11:85996826|86003451
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MVRDRPVLAREDTALESVVALLAAVESLIFFPSKEAKCCSKASRRLLG
Nucleotide Sequence TTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAGTTGCCCTGCTTGCAGCTGTAGAATCTTTGATTTTCTTTCCTTCCAAGGAAGCTAAATGTTGTTCCAAAGCATCAAGAAGACTGCTAGGG

CircID chr11:85996826|86003451
ORF Type ORF4
Protein Length 142
Nucleotide Length 426
Protein Sequence MEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVASTWG
Nucleotide Sequence TTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGA

CircID chr11:85996826|86003451
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MHQPLTYFLPLVLLTAHQSCPMICLICSSQLFTHLYILCQLLLR
Nucleotide Sequence CTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAG

CircID chr11:85996826|86003451
ORF Type ORF1
Protein Length 70
Nucleotide Length 213
Protein Sequence MVQSLSLLLRWIQERLQLLKRYEVSLQVLLGALKLSNVPVLPLMLPAFPFHPLWSEIDQCLPGKTLHWKV
Nucleotide Sequence CTGGTGCAGTCATTATCCCTCCTGCTGAGGTGGATACAGGAGAGGCTGCAGTTGTTAAAGAGGTATGAGGTTTCTTTGCAAGTTCTTTTAGGCGCTTTAAAGCTTTCAAACGTGCCTGTTCTTCCTCTAATGCTGCCTGCTTTTCCCTTTCATCCACTTTGGTCAGAGATAGACCAGTGCTTGCCAGGGAAGACACTGCATTGGAAAGTGTAG

CircID chr11:85996826|86003451
ORF Type ORF4
Protein Length 140
Nucleotide Length 420
Protein Sequence MEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQAALEEEQARLKALKRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVASTWG
Nucleotide Sequence TTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr11:85996826|86003451 NOP56 2 1 0
chr11:85996826|86003451 FUS 0 1 1
chr11:85996826|86003451 SF3B4 1 0 0
chr11:85996826|86003451 PRPF8 0 0 2
chr11:85996826|86003451 TARDBP 0 1 0
chr11:85996826|86003451 UPF1 1 1 0
chr11:85996826|86003451 TAF15 0 4 0
chr11:85996826|86003451 FMR1 0 2 2
chr11:85996826|86003451 NUDT21 1 0 0
chr11:85996826|86003451 TIA1 4 1 0
chr11:85996826|86003451 ELAVL1 5 8 2
chr11:85996826|86003451 WDR33 2 0 0
chr11:85996826|86003451 SRSF1 0 0 2
chr11:85996826|86003451 NOP58 0 0 2
chr11:85996826|86003451 SRSF3 0 0 1
chr11:85996826|86003451 U2AF1 2 0 1
chr11:85996826|86003451 U2AF2 20 11 4
chr11:85996826|86003451 DDX54 1 0 14
chr11:85996826|86003451 RBM10 1 0 0
chr11:85996826|86003451 PCBP2 1 0 0
chr11:85996826|86003451 SF3A3 1 0 0
chr11:85996826|86003451 FIP1L1 0 1 0
chr11:85996826|86003451 PTBP1 0 1 1
chr11:85996826|86003451 HNRNPC 0 4 0
chr11:85996826|86003451 TRA2A 1 0 0
chr11:85996826|86003451 HNRNPA1 0 4 0
chr11:85996826|86003451 ZC3H7B 0 0 1
chr11:85996826|86003451 SMNDC1 2 0 0
chr11:85996826|86003451 MSI2 0 0 1
chr11:85996826|86003451 ACIN1 0 1 3
chr11:85996826|86003451 LIN28B 1 0 1
chr11:85996826|86003451 FXR1 0 0 2
chr11:85996826|86003451 FXR2 0 0 2
chr11:85996826|86003451 IGF2BP1 0 4 10
chr11:85996826|86003451 IGF2BP3 0 3 5
chr11:85996826|86003451 IGF2BP2 3 4 16
chr11:85996826|86003451 RBFOX2 1 1 0
chr11:85996826|86003451 BUD13 1 0 3
chr11:85996826|86003451 KHSRP 2 0 0
chr11:85996826|86003451 RBM47 2 2 3
chr11:85996826|86003451 CSTF2T 1 0 4
chr11:85996826|86003451 CSTF2 1 0 0
chr11:85996826|86003451 RBM22 0 1 0
chr11:85996826|86003451 TIAL1 3 1 0
chr11:85996826|86003451 HNRNPK 3 0 0
chr11:85996826|86003451 EIF4A3 1 8 8
chr11:85996826|86003451 AGO2 1 0 5