CircRNA Information

General Information
circRNA Basic Information
CircID chr11:86808503|86808715
Strand -
CircType exon
Host Gene ENSG00000150687.10;
Algorism CIRI2;
Sequence CAGGCAATTTGGTGTATCGCTTCTGTGACGTCAAAGACGAGACCTATGACTTGCTCTACCAGCAATGCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCTATGTGAGGATGTGGAAGAGACAGCAGCAGAAGTGGGAGCGAAAAATTATTGGCATTTTTTCAGGGCACCAGTGGGTGGACATGAATGGTTCCCCACAGGATTTCAACGTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:86808503|86808715 hsa-miR-376c-5p 0 0 1
chr11:86808503|86808715 hsa-miR-376c-3p 0 0 1
chr11:86808503|86808715 hsa-miR-379-5p 0 0 1
chr11:86808503|86808715 hsa-miR-379-3p 0 0 1
chr11:86808503|86808715 hsa-miR-593-5p 0 0 1
chr11:86808503|86808715 hsa-miR-593-3p 0 0 1
chr11:86808503|86808715 hsa-miR-612 0 1 1
chr11:86808503|86808715 hsa-miR-626 0 0 1
chr11:86808503|86808715 hsa-miR-874-5p 0 0 1
chr11:86808503|86808715 hsa-miR-874-3p 0 0 1
chr11:86808503|86808715 hsa-miR-1236-5p 0 0 1
chr11:86808503|86808715 hsa-miR-1236-3p 0 0 1
chr11:86808503|86808715 hsa-miR-491-5p 0 1 1
chr11:86808503|86808715 hsa-miR-532-3p 0 0 1
chr11:86808503|86808715 hsa-miR-146b-3p 0 0 1
chr11:86808503|86808715 hsa-miR-331-3p 0 0 1
chr11:86808503|86808715 hsa-miR-590-3p 0 0 1
chr11:86808503|86808715 hsa-miR-138 0 0 1
chr11:86808503|86808715 hsa-miR-1285 0 0 1
chr11:86808503|86808715 hsa-miR-203 0 0 1
chr11:86808503|86808715 hsa-miR-548q 0 1 0
chr11:86808503|86808715 hsa-miR-4492 1 0 0
chr11:86808503|86808715 hsa-miR-1587 1 0 0
chr11:86808503|86808715 hsa-miR-6071 1 0 0
chr11:86808503|86808715 hsa-miR-6860 0 1 0
chr11:86808503|86808715 hsa-miR-7976 1 0 0
chr11:86808503|86808715 hsa-miR-11401 1 0 0
chr11:86808503|86808715 hsa-miR-138-5p 1 0 0
chr11:86808503|86808715 hsa-miR-134-3p 0 1 0
chr11:86808503|86808715 hsa-miR-1233-3p 1 0 0
chr11:86808503|86808715 hsa-miR-224-5p 0 1 0
chr11:86808503|86808715 hsa-miR-6875-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6882-3p 1 0 0
chr11:86808503|86808715 hsa-miR-4436b-5p 1 1 0
chr11:86808503|86808715 hsa-miR-6772-3p 1 0 0
chr11:86808503|86808715 hsa-miR-4732-5p 0 1 0
chr11:86808503|86808715 hsa-miR-4743-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6818-3p 1 1 0
chr11:86808503|86808715 hsa-miR-5196-3p 0 1 0
chr11:86808503|86808715 hsa-miR-4757-3p 1 1 0
chr11:86808503|86808715 hsa-miR-1237-3p 1 0 0
chr11:86808503|86808715 hsa-miR-3120-5p 1 0 0
chr11:86808503|86808715 hsa-miR-7106-3p 1 0 0
chr11:86808503|86808715 hsa-miR-1295b-3p 0 1 0
chr11:86808503|86808715 hsa-miR-6895-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6773-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6738-3p 1 0 0
chr11:86808503|86808715 hsa-miR-7152-5p 1 0 0
chr11:86808503|86808715 hsa-miR-3156-3p 0 1 0
chr11:86808503|86808715 hsa-miR-3620-5p 1 0 0
chr11:86808503|86808715 hsa-miR-10392-5p 1 0 0
chr11:86808503|86808715 hsa-miR-3187-5p 0 1 0
chr11:86808503|86808715 hsa-miR-6799-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6791-5p 1 0 0
chr11:86808503|86808715 hsa-miR-6893-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6848-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6876-3p 1 1 0
chr11:86808503|86808715 hsa-miR-6827-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6833-3p 1 0 0
chr11:86808503|86808715 hsa-miR-6504-5p 0 1 0
chr11:86808503|86808715 hsa-miR-6874-3p 1 0 0
chr11:86808503|86808715 hsa-miR-4676-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:86808503|86808715
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MRCPARGQRVWGLCEDVEETAAEVGAKNYWHFFRAPVGGHEWFPTGFQR
Nucleotide Sequence ATGCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCTATGTGAGGATGTGGAAGAGACAGCAGCAGAAGTGGGAGCGAAAAATTATTGGCATTTTTTCAGGGCACCAGTGGGTGGACATGAATGGTTCCCCACAGGATTTCAACGT

CircID chr11:86808503|86808715
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence MVYRFCDVKDETYDLLYQQCDAQPGASGSGVYVRMWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNV
Nucleotide Sequence TTGGTGTATCGCTTCTGTGACGTCAAAGACGAGACCTATGACTTGCTCTACCAGCAATGCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCTATGTGAGGATGTGGAAGAGACAGCAGCAGAAGTGGGAGCGAAAAATTATTGGCATTTTTTCAGGGCACCAGTGGGTGGACATGAATGGTTCCCCACAGGATTTCAACGTG

CircID chr11:86808503|86808715
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MLLSLPHPHIDPRPAGPWLGIALLVEQVIGLVFDVTEAIHQIA
Nucleotide Sequence CTGCTGCTGTCTCTTCCACATCCTCACATAGACCCCAGACCCGCTGGCCCCTGGCTGGGCATCGCATTGCTGGTAGAGCAAGTCATAGGTCTCGTCTTTGACGTCACAGAAGCGATACACCAAATTGCC

CircID chr11:86808503|86808715
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MKSCGEPFMSTHWCPEKMPIIFRSHFCCCLFHILT
Nucleotide Sequence TTGAAATCCTGTGGGGAACCATTCATGTCCACCCACTGGTGCCCTGAAAAAATGCCAATAATTTTTCGCTCCCACTTCTGCTGCTGTCTCTTCCACATCCTCACATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites