CircRNA Information

General Information
circRNA Basic Information
CircID chr11:994132|994242
Strand +
CircType exon
Host Gene ENSG00000183020.12;
Algorism CIRI2;
Sequence GGCGCTGGTACTGGCTGGGGCAGGCTCAGGACCCCCGTTCACGTCCACACTCCTGTCCCGCTTGGTGTCCTCCAGGTCTGTCACCGTGCTGGGGCCCTTCTTCTTCTTGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr11:994132|994242 hsa-miR-122-5p 0 0 1
chr11:994132|994242 hsa-miR-122-3p 0 0 1
chr11:994132|994242 hsa-miR-575 0 0 1
chr11:994132|994242 hsa-miR-596 0 0 1
chr11:994132|994242 hsa-miR-619-5p 0 0 1
chr11:994132|994242 hsa-miR-619-3p 0 0 1
chr11:994132|994242 hsa-miR-631 0 0 1
chr11:994132|994242 hsa-miR-634 0 0 1
chr11:994132|994242 hsa-miR-765 0 0 1
chr11:994132|994242 hsa-miR-887-5p 0 0 1
chr11:994132|994242 hsa-miR-887-3p 0 0 1
chr11:994132|994242 hsa-miR-1200 0 0 1
chr11:994132|994242 hsa-miR-1197 0 0 1
chr11:994132|994242 hsa-miR-296-5p 0 0 1
chr11:994132|994242 hsa-miR-770-5p 0 0 1
chr11:994132|994242 hsa-miR-615-5p 0 0 1
chr11:994132|994242 hsa-miR-574-5p 0 0 1
chr11:994132|994242 hsa-miR-324-3p 0 0 1
chr11:994132|994242 hsa-miR-542-3p 0 0 1
chr11:994132|994242 hsa-miR-612 1 0 0
chr11:994132|994242 hsa-miR-4298 1 0 0
chr11:994132|994242 hsa-miR-1268b 1 0 0
chr11:994132|994242 hsa-miR-6860 1 0 0
chr11:994132|994242 hsa-miR-6727-5p 1 0 0
chr11:994132|994242 hsa-miR-7845-5p 1 0 0
chr11:994132|994242 hsa-miR-5088-5p 1 0 0
chr11:994132|994242 hsa-miR-7160-3p 1 0 0
chr11:994132|994242 hsa-miR-3191-3p 1 0 0
chr11:994132|994242 hsa-miR-6775-5p 1 0 0
chr11:994132|994242 hsa-miR-6743-5p 1 0 0
chr11:994132|994242 hsa-miR-6803-5p 1 0 0
chr11:994132|994242 hsa-miR-10401-5p 1 0 0
chr11:994132|994242 hsa-miR-6836-5p 1 0 0
chr11:994132|994242 hsa-miR-328-5p 1 0 0
chr11:994132|994242 hsa-miR-6794-5p 1 0 0
chr11:994132|994242 hsa-miR-6795-5p 1 0 0
chr11:994132|994242 hsa-miR-6887-5p 1 0 0
chr11:994132|994242 hsa-miR-4436b-3p 1 0 0
chr11:994132|994242 hsa-miR-6885-5p 1 0 0
chr11:994132|994242 hsa-miR-6511a-5p 1 0 0
chr11:994132|994242 hsa-miR-3184-5p 1 0 0
chr11:994132|994242 hsa-miR-6790-5p 1 0 0
chr11:994132|994242 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr11:994132|994242
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MVLAGAGSGPPFTSTLLSRLVSSRSVTVLGPFFFL
Nucleotide Sequence CTGGTACTGGCTGGGGCAGGCTCAGGACCCCCGTTCACGTCCACACTCCTGTCCCGCTTGGTGTCCTCCAGGTCTGTCACCGTGCTGGGGCCCTTCTTCTTCTTG

CircID chr11:994132|994242
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGQAQDPRSRPHSCPAWCPPGLSPCWGPSSS
Nucleotide Sequence CTGGGGCAGGCTCAGGACCCCCGTTCACGTCCACACTCCTGTCCCGCTTGGTGTCCTCCAGGTCTGTCACCGTGCTGGGGCCCTTCTTCTTCTTGA

CircID chr11:994132|994242
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MEDTKRDRSVDVNGGPEPAPASTSA
Nucleotide Sequence CTGGAGGACACCAAGCGGGACAGGAGTGTGGACGTGAACGGGGGTCCTGAGCCTGCCCCAGCCAGTACCAGCGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites