CircNet

General Information

circRNA Basic Information

CircID	chr11:99956806\|100074294
Strand	+
CircType	exon
Host Gene	ENSG00000149972.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGATCATCTATAGCTGGGTATTTAATGAGTTCCCTTCCTTTGTGGCGGAAGACAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGAAAAACACAGTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGAGAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGAATGCTTTGCACTTGGCAACTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTACCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr11:99956806\|100074294	hsa-miR-143-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr11:99956806\|100074294
ORF Type	ORF1
Protein Length	135
Nucleotide Length	405
Protein Sequence	VAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNFSSHFCTESTEENNNCYQRPRSCHRVQTPRLSKTNHLLEERRQSS*
Nucleotide Sequence	GTGGCGGAAGACAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGAAAAACACAGTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGAGAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGAATGCTTTGCACTTGGCAACTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTACCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGAGACAGAGCAGTTAG

CircID	chr11:99956806\|100074294
ORF Type	ORF2
Protein Length	79
Nucleotide Length	237
Protein Sequence	MSRKLRSIFLSRLQLLKEQLLRWNALHLATSAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPTISWKKGDRAVRENK
Nucleotide Sequence	ATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGAATGCTTTGCACTTGGCAACTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTACCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGAGACAGAGCAGTTAGAGAAAACAAA

CircID	chr11:99956806\|100074294
ORF Type	ORF3
Protein Length	44
Nucleotide Length	132
Protein Sequence	MDLNFRLIFSHHTIITQSEWRWRTKDSSIRHCVFHQTNIAANI*
Nucleotide Sequence	ATGGACCTCAATTTTCGGCTCATATTCTCCCATCACACCATCATTACGCAGAGTGAGTGGCGTTGGAGGACTAAGGACTCTAGCATTCGTCACTGTGTTTTTCACCAGACAAATATAGCTGCCAACATCTGA

CircID	chr11:99956806\|100074294
ORF Type	ORF4
Protein Length	39
Nucleotide Length	117
Protein Sequence	MSSLPLWRKTAGGSSPRRQATFIFLKSKHQMLAAIFVW*
Nucleotide Sequence	ATGAGTTCCCTTCCTTTGTGGCGGAAGACAGCCGGCGGTTCATCTCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGA

CircID	chr11:99956806\|100074294
ORF Type	ORF5
Protein Length	75
Nucleotide Length	225
Protein Sequence	LFSSVDSVQKWELKLPSAKHSILTVVPLAAVTVKGKWTSIFGSYSPITPSLRRVSGVGGLRTLAFVTVFFTRQI*
Nucleotide Sequence	TTGTTTTCTTCAGTTGATTCAGTGCAAAAGTGGGAGCTGAAGTTGCCAAGTGCAAAGCATTCCATCTTAACAGTTGTTCCTTTAGCAGCTGTAACCGTGAAAGGAAAATGGACCTCAATTTTCGGCTCATATTCTCCCATCACACCATCATTACGCAGAGTGAGTGGCGTTGGAGGACTAAGGACTCTAGCATTCGTCACTGTGTTTTTCACCAGACAAATATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr11:99956806\|100074294	RBM5	0	0	1
chr11:99956806\|100074294	FUS	1	0	0
chr11:99956806\|100074294	TAF15	0	2	0

CircRNA Information