CircRNA Information

General Information
circRNA Basic Information
CircID chr12:100095667|100098541
Strand -
CircType exon
Host Gene ENSG00000111647.12;
Algorism find_circ;CIRI2;DCC;
Sequence TGAATACGGCTTTGCTGAAAAAGTAGTTGAGGGAATTTCTGTTTCTGTAAATTCTATAGTCATCAGAATTGGAGCAAAAGCCTTCAATGCATCATTTGAACTTTCTCAGCTTCGGATCTATAGTGTAAATGCACACTGGGAACATGGAGATTTGAGATTTACTCGTATTCAGGATCCACAGAGAGGAGAGGTTTTGACTTTTAAAGAAATAAATTGGCAGATGATAAGAATAGAGGCAGATGCCACCCAAAGTTCACATCTTGAAATTATGTGTGCTCCTGTTCGATTAATAACCAACCAATCAAAAATCAGAGTCACACTTAAAAGAAGGTTAAAGGACTGCAATGTCATAGCAACAAAGTTAGTTCTAATATTGGATGACTTATTATGGGTTTTGACTGATTCCCAGTTGAAAGCTATGGTACAATATGCAAAGTCTCTTAGTGAAGCAATAGAAAAATCAACAGAACAAAGGAAGAGTATGGCTCCTGAACCTACACAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:100095667|100098541 hsa-miR-106a-3p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr12:100095667|100098541 U2AF2 1 0 1
chr12:100095667|100098541 ELAVL1 0 1 0
chr12:100095667|100098541 PRPF8 1 0 0
chr12:100095667|100098541 FUS 0 1 0
chr12:100095667|100098541 EIF3H 1 0 0
chr12:100095667|100098541 NOP58 0 1 5
chr12:100095667|100098541 NOP56 2 0 1
chr12:100095667|100098541 DDX54 0 0 3
chr12:100095667|100098541 IGF2BP1 0 0 3
chr12:100095667|100098541 GRWD1 3 0 0
chr12:100095667|100098541 PTBP1 0 1 1
chr12:100095667|100098541 HNRNPC 1 0 0
chr12:100095667|100098541 TRA2A 2 0 1
chr12:100095667|100098541 DDX3X 0 0 1
chr12:100095667|100098541 MSI2 0 2 2
chr12:100095667|100098541 HNRNPA1 0 1 0
chr12:100095667|100098541 FXR1 0 0 2
chr12:100095667|100098541 UCHL5 1 0 0
chr12:100095667|100098541 IGF2BP3 0 0 1
chr12:100095667|100098541 IGF2BP2 0 0 3
chr12:100095667|100098541 BUD13 1 0 0
chr12:100095667|100098541 RBFOX2 0 1 0
chr12:100095667|100098541 RBM47 0 0 3
chr12:100095667|100098541 CSTF2T 0 0 1
chr12:100095667|100098541 PPIG 3 0 0
chr12:100095667|100098541 EIF4A3 0 4 8
chr12:100095667|100098541 FBL 0 1 1