CircNet

General Information

circRNA Basic Information

CircID	chr12:100492503\|100511143
Strand	+
CircType	exon
Host Gene	ENSG00000012504.13;
Algorism	CIRI2;find_circ;DCC;
Sequence	GGAGGTAGAAGACATCGTAGAAGGAGTGAAAGAAGAAAAGAAGACTTAGAAACATAGCTCAAAGTGAACACTGCTTCTCTTAGTTTCCTGGATTTCTTCTGGACATTTCCTCAAGATGAAACTTCAGACACTTTGCAGCCTGAAGAGTGGTACTCTCCTGGAATATATGAACTCAGGCGTATGCCAGCTGAGACTCTCTACCAGGGAGAAACTGAGGTAGCAGAGATGCCTGTAACAAAGAAGCCCCGCATGGGCGCGTCAGCAGGGAGGATCAAAGGGGATGAGCTGTGTGTTGTTTGTGGAGACAGAGCCTCTGGATACCACTATAATGCACTGACCTGTGAGGGGTGTAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:100492503\|100511143	hsa-miR-198	0	1	1
chr12:100492503\|100511143	hsa-miR-103a-2-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:100492503\|100511143
ORF Type	ORF1
Protein Length	58
Nucleotide Length	174
Protein Sequence	MPAETLYQGETEVAEMPVTKKPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCK
Nucleotide Sequence	ATGCCAGCTGAGACTCTCTACCAGGGAGAAACTGAGGTAGCAGAGATGCCTGTAACAAAGAAGCCCCGCATGGGCGCGTCAGCAGGGAGGATCAAAGGGGATGAGCTGTGTGTTGTTTGTGGAGACAGAGCCTCTGGATACCACTATAATGCACTGACCTGTGAGGGGTGTAAA

CircID	chr12:100492503\|100511143
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MKLQTLCSLKSGTLLEYMNSGVCQLRLSTREKLR*
Nucleotide Sequence	ATGAAACTTCAGACACTTTGCAGCCTGAAGAGTGGTACTCTCCTGGAATATATGAACTCAGGCGTATGCCAGCTGAGACTCTCTACCAGGGAGAAACTGAGGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:100492503\|100511143	SRSF1	0	0	2
chr12:100492503\|100511143	DDX3X	1	0	0
chr12:100492503\|100511143	ELAVL1	1	0	0
chr12:100492503\|100511143	ADAR	0	1	0
chr12:100492503\|100511143	U2AF2	0	1	0
chr12:100492503\|100511143	TIA1	0	1	0
chr12:100492503\|100511143	PRPF8	0	2	1
chr12:100492503\|100511143	DKC1	1	0	0
chr12:100492503\|100511143	BUD13	0	0	1
chr12:100492503\|100511143	TRA2A	1	0	2
chr12:100492503\|100511143	TARDBP	0	2	0

CircRNA Information