CircRNA Information

General Information
circRNA Basic Information
CircID chr12:101383128|101383277
Strand -
CircType exon
Host Gene ENSG00000120800.4;
Algorism CIRI2;
Sequence CTGGAAGAACAAGAAGCTTTAGAAGATGGTGTGGCCTGTGCAGATGAGAAGGCGGAGTCTGACGGAGAAGAGAAGGAAGAGGTGAAGGAAGAGCTCGGCAGGCCGGCCACGCTGCTGTGGTTGATCCAGAAGCTGTCCCGGATTGCAAAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:101383128|101383277 hsa-miR-205-5p 0 0 1
chr12:101383128|101383277 hsa-miR-205-3p 0 0 1
chr12:101383128|101383277 hsa-miR-320a-5p 0 0 1
chr12:101383128|101383277 hsa-miR-320a-3p 0 0 1
chr12:101383128|101383277 hsa-miR-412-5p 0 0 1
chr12:101383128|101383277 hsa-miR-412-3p 0 0 1
chr12:101383128|101383277 hsa-miR-503-5p 0 0 1
chr12:101383128|101383277 hsa-miR-503-3p 0 0 1
chr12:101383128|101383277 hsa-miR-507 0 0 1
chr12:101383128|101383277 hsa-miR-557 0 0 1
chr12:101383128|101383277 hsa-miR-578 0 0 1
chr12:101383128|101383277 hsa-miR-942-5p 0 0 1
chr12:101383128|101383277 hsa-miR-942-3p 0 0 1
chr12:101383128|101383277 hsa-miR-1234-3p 0 0 1
chr12:101383128|101383277 hsa-miR-1236-5p 0 0 1
chr12:101383128|101383277 hsa-miR-1236-3p 0 0 1
chr12:101383128|101383277 hsa-miR-1237-5p 0 0 1
chr12:101383128|101383277 hsa-miR-1237-3p 0 0 1
chr12:101383128|101383277 hsa-miR-1204 0 1 1
chr12:101383128|101383277 hsa-miR-1299 0 0 1
chr12:101383128|101383277 hsa-miR-1248 0 0 1
chr12:101383128|101383277 hsa-miR-1234 0 0 1
chr12:101383128|101383277 hsa-miR-140-3p 0 0 1
chr12:101383128|101383277 hsa-miR-320b 0 0 1
chr12:101383128|101383277 hsa-miR-320c 0 0 1
chr12:101383128|101383277 hsa-miR-320d 0 0 1
chr12:101383128|101383277 hsa-miR-450b-5p 0 0 1
chr12:101383128|101383277 hsa-miR-516b 0 0 1
chr12:101383128|101383277 hsa-miR-346 1 0 0
chr12:101383128|101383277 hsa-miR-596 1 1 0
chr12:101383128|101383277 hsa-miR-638 1 0 0
chr12:101383128|101383277 hsa-miR-1200 1 0 0
chr12:101383128|101383277 hsa-miR-1243 1 1 0
chr12:101383128|101383277 hsa-miR-1281 1 0 0
chr12:101383128|101383277 hsa-miR-4497 1 1 0
chr12:101383128|101383277 hsa-miR-4522 1 0 0
chr12:101383128|101383277 hsa-miR-5090 1 0 0
chr12:101383128|101383277 hsa-miR-5706 0 1 0
chr12:101383128|101383277 hsa-miR-103a-2-5p 1 0 0
chr12:101383128|101383277 hsa-miR-93-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6881-3p 1 0 0
chr12:101383128|101383277 hsa-miR-7160-5p 1 0 0
chr12:101383128|101383277 hsa-miR-6875-3p 1 0 0
chr12:101383128|101383277 hsa-miR-877-3p 1 1 0
chr12:101383128|101383277 hsa-miR-6868-3p 1 1 0
chr12:101383128|101383277 hsa-miR-4753-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6810-5p 1 0 0
chr12:101383128|101383277 hsa-miR-6735-3p 1 1 0
chr12:101383128|101383277 hsa-miR-6788-3p 1 0 0
chr12:101383128|101383277 hsa-miR-615-3p 1 0 0
chr12:101383128|101383277 hsa-miR-4436b-5p 1 0 0
chr12:101383128|101383277 hsa-miR-6884-3p 1 0 0
chr12:101383128|101383277 hsa-miR-4763-5p 1 1 0
chr12:101383128|101383277 hsa-miR-2277-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6894-3p 1 1 0
chr12:101383128|101383277 hsa-miR-6803-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6878-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6809-3p 1 1 0
chr12:101383128|101383277 hsa-miR-7111-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6830-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6837-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6880-3p 0 1 0
chr12:101383128|101383277 hsa-miR-3670 1 0 0
chr12:101383128|101383277 hsa-miR-5584-3p 1 0 0
chr12:101383128|101383277 hsa-miR-4717-5p 0 1 0
chr12:101383128|101383277 hsa-miR-6812-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6502-3p 1 0 0
chr12:101383128|101383277 hsa-let-7g-3p 0 1 0
chr12:101383128|101383277 hsa-miR-6775-5p 1 0 0
chr12:101383128|101383277 hsa-miR-6743-5p 1 0 0
chr12:101383128|101383277 hsa-miR-6754-3p 1 1 0
chr12:101383128|101383277 hsa-miR-4632-5p 1 0 0
chr12:101383128|101383277 hsa-miR-3187-5p 1 0 0
chr12:101383128|101383277 hsa-miR-2682-3p 1 0 0
chr12:101383128|101383277 hsa-miR-4722-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6727-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6893-3p 1 0 0
chr12:101383128|101383277 hsa-miR-6792-3p 1 0 0
chr12:101383128|101383277 hsa-miR-103a-1-5p 1 0 0
chr12:101383128|101383277 hsa-miR-452-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:101383128|101383277
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence LEEQEALEDGVACADEKAESDGEEKEEVKEELGRPATLLWLIQKLSRIAK
Nucleotide Sequence CTGGAAGAACAAGAAGCTTTAGAAGATGGTGTGGCCTGTGCAGATGAGAAGGCGGAGTCTGACGGAGAAGAGAAGGAAGAGGTGAAGGAAGAGCTCGGCAGGCCGGCCACGCTGCTGTGGTTGATCCAGAAGCTGTCCCGGATTGCAAAA
CircID chr12:101383128|101383277
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MDQPQQRGRPAELFLHLFLLFSVRLRLLICTGHTIF
Nucleotide Sequence CTGGATCAACCACAGCAGCGTGGCCGGCCTGCCGAGCTCTTCCTTCACCTCTTCCTTCTCTTCTCCGTCAGACTCCGCCTTCTCATCTGCACAGGCCACACCATCTTCTAA
CircID chr12:101383128|101383277
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MPSSSFTSSFSSPSDSAFSSAQATPSSKASCSS
Nucleotide Sequence CTGCCGAGCTCTTCCTTCACCTCTTCCTTCTCTTCTCCGTCAGACTCCGCCTTCTCATCTGCACAGGCCACACCATCTTCTAAAGCTTCTTGTTCTTCC
CircID chr12:101383128|101383277
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence LQSGTASGSTTAAWPACRALPSPLPSLLRQTPPSHLHRPHHLLKLLVLP
Nucleotide Sequence TTGCAATCCGGGACAGCTTCTGGATCAACCACAGCAGCGTGGCCGGCCTGCCGAGCTCTTCCTTCACCTCTTCCTTCTCTTCTCCGTCAGACTCCGCCTTCTCATCTGCACAGGCCACACCATCTTCTAAAGCTTCTTGTTCTTCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab