CircNet

General Information

circRNA Basic Information

CircID	chr12:10166712\|10169175
Strand	-
CircType	exon
Host Gene	ENSG00000173391.8;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTCTTCAGTTTCTTTACTCTCCATGGTGGTGCCTGGCTGCTGCGACTCTAGGGGTCCTTTGCCTGGGATTAGTAGTGACCATTATGGTGCTGGGCATGCAATAGAATGGGAGGAGACACAGCAGAGGAATTGAGACATAAATAGAGTAAATCGCTAATGACATTTCCTACTAATAGTCACTGAGTCTGAGATGGGGTTTCACCATGTTGGCCAGGATGGTCTCTATCTCTTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACCTGAGCCACCGTGCCTGGCCAAAATCTTGACAAGTGTTTGCAATGTTCCTGACATTAAACAAAATACTGCAGGAATATTCAAGAACCTCCAAATCTGTAACTTCTGAGTAAATCTGGGTCATTTTTCAGCAGCTTATCTATTGTCAAAATAGATTTAATTCTGTTTTGATTTCCTCAAAAAGTCCCTGGAGGGATTTTTATTTGGATTAGAACTAGAGTCTTAATGCAACTGTGATTCAGTATCCCAGGTGTCTGACCTCCTAACACAAGAGCAAGCAAACCTAACTCACCAGAAAAAGAAACTGGAGGGACAGATCTCAGCCCGGCAACAAGCAGAAGAAGCTTCACAGGAGTCAGAAAACGAACTCAAGGAAATGATAGAAACCCTTGCTCGGAAGCTGAATGAGAAATCCAAAGAGCAAATGGAACTTCACCACCAGAATCTGAATCTCCAAGAAACACTGAAGAGAGTAGCAAATTGTTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:10166712\|10169175	hsa-miR-196a-3p	0	1	1
chr12:10166712\|10169175	hsa-miR-216a-5p	0	1	1

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:10166712\|10169175
ORF Type	ORF1
Protein Length	78
Nucleotide Length	234
Protein Sequence	MTQIYSEVTDLEVLEYSCSILFNVRNIANTCQDFGQARWLRSVIPALWEAEAGRSRGQEIETILANMVKPHLRLSDY*
Nucleotide Sequence	ATGACCCAGATTTACTCAGAAGTTACAGATTTGGAGGTTCTTGAATATTCCTGCAGTATTTTGTTTAATGTCAGGAACATTGCAAACACTTGTCAAGATTTTGGCCAGGCACGGTGGCTCAGGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAAGAGATAGAGACCATCCTGGCCAACATGGTGAAACCCCATCTCAGACTCAGTGACTATTAG

CircID	chr12:10166712\|10169175
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MSLAIYSIYVSIPLLCLLPFYCMPSTIMVTTNPRQRTPRVAAARHHHGE*
Nucleotide Sequence	ATGTCATTAGCGATTTACTCTATTTATGTCTCAATTCCTCTGCTGTGTCTCCTCCCATTCTATTGCATGCCCAGCACCATAATGGTCACTACTAATCCCAGGCAAAGGACCCCTAGAGTCGCAGCAGCCAGGCACCACCATGGAGAGTAA

CircID	chr12:10166712\|10169175
ORF Type	ORF3
Protein Length	37
Nucleotide Length	111
Protein Sequence	MIETLARKLNEKSKEQMELHHQNLNLQETLKRVANCS
Nucleotide Sequence	ATGATAGAAACCCTTGCTCGGAAGCTGAATGAGAAATCCAAAGAGCAAATGGAACTTCACCACCAGAATCTGAATCTCCAAGAAACACTGAAGAGAGTAGCAAATTGTTCA

CircID	chr12:10166712\|10169175
ORF Type	ORF4
Protein Length	37
Nucleotide Length	111
Protein Sequence	MVVPGCCDSRGPLPGISSDHYGAGHAIEWEETQQRN*
Nucleotide Sequence	ATGGTGGTGCCTGGCTGCTGCGACTCTAGGGGTCCTTTGCCTGGGATTAGTAGTGACCATTATGGTGCTGGGCATGCAATAGAATGGGAGGAGACACAGCAGAGGAATTGA

CircID	chr12:10166712\|10169175
ORF Type	ORF5
Protein Length	58
Nucleotide Length	174
Protein Sequence	VKLLLLVAGLRSVPPVSFSGELGLLALVLGGQTPGILNHSCIKTLVLIQIKIPPGTF*
Nucleotide Sequence	GTGAAGCTTCTTCTGCTTGTTGCCGGGCTGAGATCTGTCCCTCCAGTTTCTTTTTCTGGTGAGTTAGGTTTGCTTGCTCTTGTGTTAGGAGGTCAGACACCTGGGATACTGAATCACAGTTGCATTAAGACTCTAGTTCTAATCCAAATAAAAATCCCTCCAGGGACTTTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:10166712\|10169175	ELAVL1	0	0	5
chr12:10166712\|10169175	FUBP3	0	0	1
chr12:10166712\|10169175	PRPF8	0	0	1
chr12:10166712\|10169175	YTHDF1	0	0	1
chr12:10166712\|10169175	UPF1	0	4	3
chr12:10166712\|10169175	CPSF7	0	0	1
chr12:10166712\|10169175	NUDT21	0	1	0
chr12:10166712\|10169175	FUS	2	1	0
chr12:10166712\|10169175	SRSF7	2	0	0
chr12:10166712\|10169175	SRSF1	1	0	0
chr12:10166712\|10169175	SRSF3	1	0	0
chr12:10166712\|10169175	ADAR	0	0	2
chr12:10166712\|10169175	U2AF2	8	1	9
chr12:10166712\|10169175	GRWD1	0	0	1
chr12:10166712\|10169175	HNRNPL	0	1	0
chr12:10166712\|10169175	FIP1L1	1	0	0
chr12:10166712\|10169175	PTBP1	1	0	0
chr12:10166712\|10169175	HNRNPC	2	3	16
chr12:10166712\|10169175	DHX9	0	0	2
chr12:10166712\|10169175	HNRNPA1	0	0	1
chr12:10166712\|10169175	LARP4	0	0	1
chr12:10166712\|10169175	ACIN1	1	0	4
chr12:10166712\|10169175	IGF2BP2	0	0	9
chr12:10166712\|10169175	CSTF2T	1	0	2
chr12:10166712\|10169175	TARBP2	0	0	5
chr12:10166712\|10169175	ILF3	0	0	1
chr12:10166712\|10169175	ATXN2	0	0	1
chr12:10166712\|10169175	EIF4A3	2	1	5
chr12:10166712\|10169175	AGO2	1	0	1

CircRNA Information