CircRNA Information

General Information
circRNA Basic Information
CircID chr12:10221787|10221904
Strand +
CircType exon
Host Gene ENSG00000139112.9;
Algorism CIRI2;
Sequence CCCTCCCCTACCCCCAAGTCCAGGTGCTCCCATCTGCTGGGCTTCCAACCACTCATTTCCCATAGACACTCTCATCACTGTAGGCCACATACAGAAAATAGTCTTCCTCATGATTGTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:10221787|10221904 hsa-miR-422a 1 1 1
chr12:10221787|10221904 hsa-miR-567 0 0 1
chr12:10221787|10221904 hsa-miR-619-5p 0 0 1
chr12:10221787|10221904 hsa-miR-619-3p 0 0 1
chr12:10221787|10221904 hsa-miR-920 0 0 1
chr12:10221787|10221904 hsa-miR-922 0 0 1
chr12:10221787|10221904 hsa-miR-297 0 0 1
chr12:10221787|10221904 hsa-miR-663b 0 0 1
chr12:10221787|10221904 hsa-miR-1275 0 0 1
chr12:10221787|10221904 hsa-miR-140-5p 0 0 1
chr12:10221787|10221904 hsa-miR-139-5p 0 1 1
chr12:10221787|10221904 hsa-miR-671-5p 1 1 1
chr12:10221787|10221904 hsa-miR-299-3p 0 0 1
chr12:10221787|10221904 hsa-miR-7 0 0 1
chr12:10221787|10221904 hsa-miR-378 0 0 1
chr12:10221787|10221904 hsa-miR-638 1 0 0
chr12:10221787|10221904 hsa-miR-2861 1 0 0
chr12:10221787|10221904 hsa-miR-378b 1 1 0
chr12:10221787|10221904 hsa-miR-378c 1 1 0
chr12:10221787|10221904 hsa-miR-3665 1 0 0
chr12:10221787|10221904 hsa-miR-378e 1 1 0
chr12:10221787|10221904 hsa-miR-378f 0 1 0
chr12:10221787|10221904 hsa-miR-378h 0 1 0
chr12:10221787|10221904 hsa-miR-4506 0 1 0
chr12:10221787|10221904 hsa-miR-4530 1 1 0
chr12:10221787|10221904 hsa-miR-378i 0 1 0
chr12:10221787|10221904 hsa-miR-1587 1 0 0
chr12:10221787|10221904 hsa-miR-4689 1 0 0
chr12:10221787|10221904 hsa-miR-5093 1 1 0
chr12:10221787|10221904 hsa-miR-5192 1 0 0
chr12:10221787|10221904 hsa-miR-6090 1 0 0
chr12:10221787|10221904 hsa-miR-6127 1 0 0
chr12:10221787|10221904 hsa-miR-12119 1 0 0
chr12:10221787|10221904 hsa-miR-134-3p 1 0 0
chr12:10221787|10221904 hsa-miR-7-5p 0 1 0
chr12:10221787|10221904 hsa-miR-6765-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6857-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6804-5p 1 0 0
chr12:10221787|10221904 hsa-miR-8069 1 0 0
chr12:10221787|10221904 hsa-miR-7108-5p 1 1 0
chr12:10221787|10221904 hsa-miR-6716-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6871-5p 1 1 0
chr12:10221787|10221904 hsa-miR-5008-5p 1 0 0
chr12:10221787|10221904 hsa-miR-1226-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6784-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6824-5p 0 1 0
chr12:10221787|10221904 hsa-miR-3158-5p 1 0 0
chr12:10221787|10221904 hsa-miR-5584-5p 1 0 0
chr12:10221787|10221904 hsa-miR-574-5p 1 0 0
chr12:10221787|10221904 hsa-miR-887-5p 1 0 0
chr12:10221787|10221904 hsa-miR-500a-3p 1 0 0
chr12:10221787|10221904 hsa-miR-6726-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6803-5p 0 1 0
chr12:10221787|10221904 hsa-miR-10401-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6751-5p 0 1 0
chr12:10221787|10221904 hsa-miR-6779-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6788-5p 1 1 0
chr12:10221787|10221904 hsa-miR-6780b-5p 1 0 0
chr12:10221787|10221904 hsa-miR-328-5p 1 0 0
chr12:10221787|10221904 hsa-miR-4685-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6883-5p 1 0 0
chr12:10221787|10221904 hsa-miR-1238-5p 1 1 0
chr12:10221787|10221904 hsa-miR-4758-5p 1 0 0
chr12:10221787|10221904 hsa-miR-10394-3p 1 0 0
chr12:10221787|10221904 hsa-miR-3116 1 0 0
chr12:10221787|10221904 hsa-miR-378a-3p 1 1 0
chr12:10221787|10221904 hsa-miR-6785-5p 1 0 0
chr12:10221787|10221904 hsa-miR-6790-5p 1 0 0
chr12:10221787|10221904 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:10221787|10221904
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MLGFQPLISHRHSHHCRPHTENSLPHDC
Nucleotide Sequence CTGCTGGGCTTCCAACCACTCATTTCCCATAGACACTCTCATCACTGTAGGCCACATACAGAAAATAGTCTTCCTCATGATTGT
CircID chr12:10221787|10221904
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MRKTIFCMWPTVMRVSMGNEWLEAQQMGAPGLGGRGG
Nucleotide Sequence ATGAGGAAGACTATTTTCTGTATGTGGCCTACAGTGATGAGAGTGTCTATGGGAAATGAGTGGTTGGAAGCCCAGCAGATGGGAGCACCTGGACTTGGGGGTAGGGGAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab