CircNet

General Information

circRNA Basic Information

CircID	chr12:106860268\|106870942
Strand	+
CircType	exon
Host Gene	ENSG00000111785.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGGATAGTCTGCTGAAATACACTGGCTATGGGAATGCTGCAGGACTGTTGGCGGCCAGGGGCCTCTTGGCTGGAGGAAGAGGAGATAATTGGTACTCAGAGGATGAGGACACAGACACTGAAGAATACAAAAATGCAAAACCAAACTCCATTGAATTTGAGGAGAGAAGCCATCTCTCAAGAGGCAAATAAGCATGATCTACATAGTTAATACATCTACCTTCCCTTATACTTTCTTCTAAGGCCTGATTTTCTTTGCTTGGGAAGTGCATTAATCTTATCACTGGTCATTTAGAGGAACCAATGCCAAACCCCATAGATGAAATGACAGAAGAACAAAAAGAATATGAAGCCATGAAACTTGTCAACATGCTTGATAAACTTTCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr12:106860268\|106870942	hsa-miR-215-3p	1	1
chr12:106860268\|106870942	hsa-miR-210-5p	1	1
chr12:106860268\|106870942	hsa-miR-218-1-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:106860268\|106870942
ORF Type	ORF1
Protein Length	82
Nucleotide Length	246
Protein Sequence	MHFPSKENQALEESIREGRCINYVDHAYLPLERWLLSSNSMEFGFAFLYSSVSVSSSSEYQLSPLPPAKRPLAANSPAAFP*
Nucleotide Sequence	ATGCACTTCCCAAGCAAAGAAAATCAGGCCTTAGAAGAAAGTATAAGGGAAGGTAGATGTATTAACTATGTAGATCATGCTTATTTGCCTCTTGAGAGATGGCTTCTCTCCTCAAATTCAATGGAGTTTGGTTTTGCATTTTTGTATTCTTCAGTGTCTGTGTCCTCATCCTCTGAGTACCAATTATCTCCTCTTCCTCCAGCCAAGAGGCCCCTGGCCGCCAACAGTCCTGCAGCATTCCCATAG

CircID	chr12:106860268\|106870942
ORF Type	ORF2
Protein Length	65
Nucleotide Length	195
Protein Sequence	MLICLLRDGFSPQIQWSLVLHFCILQCLCPHPLSTNYLLFLQPRGPWPPTVLQHSHSQCISADYP
Nucleotide Sequence	ATGCTTATTTGCCTCTTGAGAGATGGCTTCTCTCCTCAAATTCAATGGAGTTTGGTTTTGCATTTTTGTATTCTTCAGTGTCTGTGTCCTCATCCTCTGAGTACCAATTATCTCCTCTTCCTCCAGCCAAGAGGCCCCTGGCCGCCAACAGTCCTGCAGCATTCCCATAGCCAGTGTATTTCAGCAGACTATCCA

CircID	chr12:106860268\|106870942
ORF Type	ORF3
Protein Length	61
Nucleotide Length	183
Protein Sequence	MGMLQDCWRPGASWLEEEEIIGTQRMRTQTLKNTKMQNQTPLNLRREAISQEANKHDLHS*
Nucleotide Sequence	ATGGGAATGCTGCAGGACTGTTGGCGGCCAGGGGCCTCTTGGCTGGAGGAAGAGGAGATAATTGGTACTCAGAGGATGAGGACACAGACACTGAAGAATACAAAAATGCAAAACCAAACTCCATTGAATTTGAGGAGAGAAGCCATCTCTCAAGAGGCAAATAAGCATGATCTACATAGTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:106860268\|106870942	U2AF2	3	1	0
chr12:106860268\|106870942	ELAVL1	2	6	1
chr12:106860268\|106870942	SF3B4	1	0	0
chr12:106860268\|106870942	PRPF8	0	2	0
chr12:106860268\|106870942	UPF1	0	2	0
chr12:106860268\|106870942	FMR1	0	0	2
chr12:106860268\|106870942	FUS	2	1	0
chr12:106860268\|106870942	GNL3	1	0	0
chr12:106860268\|106870942	QKI	0	2	0
chr12:106860268\|106870942	SRSF1	0	0	6
chr12:106860268\|106870942	NOP58	0	0	1
chr12:106860268\|106870942	NOP56	1	0	1
chr12:106860268\|106870942	SRSF9	0	0	1
chr12:106860268\|106870942	DDX54	0	0	3
chr12:106860268\|106870942	RBM10	0	1	0
chr12:106860268\|106870942	PCBP2	0	1	0
chr12:106860268\|106870942	HNRNPC	0	3	0
chr12:106860268\|106870942	HNRNPA1	1	0	0
chr12:106860268\|106870942	RANGAP1	0	0	1
chr12:106860268\|106870942	BCCIP	0	0	1
chr12:106860268\|106870942	IGF2BP2	1	2	2
chr12:106860268\|106870942	TARDBP	1	2	0
chr12:106860268\|106870942	BUD13	0	0	1
chr12:106860268\|106870942	CSTF2T	0	0	1
chr12:106860268\|106870942	FBL	1	0	1
chr12:106860268\|106870942	EIF4A3	2	4	4
chr12:106860268\|106870942	AGO2	0	0	1

CircRNA Information