CircRNA Information

General Information
circRNA Basic Information
CircID chr12:107732961|107733125
Strand -
CircType exon
Host Gene ENSG00000110851.10;
Algorism CIRI2;
Sequence CTTCCCACCAGAGTCCTCTACTCCAGCCCAGAGGTTGTGCCTTGAGCAGGAGAGCATGTTCCATCAATCCTGTCAACTTAAGGGTGGGTCTGCTTCTGAGAAACGCTGGATGTGCATGGGAGACACAATGACCAGGTGCATGGGTGACTTAACTAAGCTGGGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:107732961|107733125 hsa-miR-224-5p 0 0 1
chr12:107732961|107733125 hsa-miR-224-3p 0 0 1
chr12:107732961|107733125 hsa-miR-150-5p 0 0 1
chr12:107732961|107733125 hsa-miR-150-3p 0 0 1
chr12:107732961|107733125 hsa-miR-370-5p 0 0 1
chr12:107732961|107733125 hsa-miR-370-3p 0 0 1
chr12:107732961|107733125 hsa-miR-382-5p 0 0 1
chr12:107732961|107733125 hsa-miR-382-3p 0 0 1
chr12:107732961|107733125 hsa-miR-326 0 0 1
chr12:107732961|107733125 hsa-miR-506-5p 0 0 1
chr12:107732961|107733125 hsa-miR-506-3p 0 0 1
chr12:107732961|107733125 hsa-miR-592 0 0 1
chr12:107732961|107733125 hsa-miR-599 0 0 1
chr12:107732961|107733125 hsa-miR-612 0 0 1
chr12:107732961|107733125 hsa-miR-616-5p 0 0 1
chr12:107732961|107733125 hsa-miR-616-3p 0 0 1
chr12:107732961|107733125 hsa-miR-541-5p 0 0 1
chr12:107732961|107733125 hsa-miR-541-3p 0 0 1
chr12:107732961|107733125 hsa-miR-877-5p 0 0 1
chr12:107732961|107733125 hsa-miR-877-3p 0 0 1
chr12:107732961|107733125 hsa-miR-532-3p 0 0 1
chr12:107732961|107733125 hsa-miR-654-5p 0 0 1
chr12:107732961|107733125 hsa-miR-767-3p 0 0 1
chr12:107732961|107733125 hsa-miR-330-5p 0 1 1
chr12:107732961|107733125 hsa-miR-502-3p 0 1 1
chr12:107732961|107733125 hsa-miR-501-3p 0 0 1
chr12:107732961|107733125 hsa-miR-124 0 0 1
chr12:107732961|107733125 hsa-miR-1285 0 0 1
chr12:107732961|107733125 hsa-miR-551a 0 1 0
chr12:107732961|107733125 hsa-miR-762 1 1 0
chr12:107732961|107733125 hsa-miR-378g 0 1 0
chr12:107732961|107733125 hsa-miR-4430 0 1 0
chr12:107732961|107733125 hsa-miR-3135b 1 1 0
chr12:107732961|107733125 hsa-miR-4518 0 1 0
chr12:107732961|107733125 hsa-miR-1587 0 1 0
chr12:107732961|107733125 hsa-miR-4656 1 0 0
chr12:107732961|107733125 hsa-miR-4433b-3p 1 0 0
chr12:107732961|107733125 hsa-miR-3194-3p 1 0 0
chr12:107732961|107733125 hsa-miR-6879-3p 0 1 0
chr12:107732961|107733125 hsa-miR-197-5p 1 0 0
chr12:107732961|107733125 hsa-miR-5010-3p 1 1 0
chr12:107732961|107733125 hsa-miR-296-3p 1 1 0
chr12:107732961|107733125 hsa-miR-6854-3p 0 1 0
chr12:107732961|107733125 hsa-miR-1180-5p 0 1 0
chr12:107732961|107733125 hsa-miR-2116-3p 0 1 0
chr12:107732961|107733125 hsa-miR-500a-3p 0 1 0
chr12:107732961|107733125 hsa-miR-6787-5p 1 0 0
chr12:107732961|107733125 hsa-miR-5001-5p 0 1 0
chr12:107732961|107733125 hsa-miR-6756-5p 1 0 0
chr12:107732961|107733125 hsa-miR-3620-5p 0 1 0
chr12:107732961|107733125 hsa-miR-3940-5p 1 0 0
chr12:107732961|107733125 hsa-miR-7114-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:107732961|107733125
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MCLEQESMFHQSCQLKGGSASEKRWMCMGDTMTRCMGDLTKLG
Nucleotide Sequence TTGTGCCTTGAGCAGGAGAGCATGTTCCATCAATCCTGTCAACTTAAGGGTGGGTCTGCTTCTGAGAAACGCTGGATGTGCATGGGAGACACAATGACCAGGTGCATGGGTGACTTAACTAAGCTGGGA
CircID chr12:107732961|107733125
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MSRRACSINPVNLRVGLLLRNAGCAWETQ
Nucleotide Sequence TTGAGCAGGAGAGCATGTTCCATCAATCCTGTCAACTTAAGGGTGGGTCTGCTTCTGAGAAACGCTGGATGTGCATGGGAGACACAATGA
CircID chr12:107732961|107733125
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MTGLMEHALLLKAQPLGWSRGLWWE
Nucleotide Sequence TTGACAGGATTGATGGAACATGCTCTCCTGCTCAAGGCACAACCTCTGGGCTGGAGTAGAGGACTCTGGTGGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab