CircRNA Information

General Information
circRNA Basic Information
CircID chr12:108623036|108623228
Strand +
CircType exon
Host Gene ENSG00000110876.9;
Algorism CIRI2;
Sequence CGAGATGGTCTGCATCTCATCCCTGTTGCCTGATGGGGGTGAGGGGCCCTCTGCCACAGCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGACGCCAGAGCCCAGGGAGGACCGTGAGGGGGATGACCTCACCCTGCACAGCTTCCTCCCTTAGCTCACTCTGCCATCTGTTTTGGCAAGACCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:108623036|108623228 hsa-miR-143-5p 0 0 1
chr12:108623036|108623228 hsa-miR-143-3p 0 0 1
chr12:108623036|108623228 hsa-miR-431-5p 0 0 1
chr12:108623036|108623228 hsa-miR-431-3p 0 0 1
chr12:108623036|108623228 hsa-miR-610 0 0 1
chr12:108623036|108623228 hsa-miR-647 0 0 1
chr12:108623036|108623228 hsa-miR-760 0 1 1
chr12:108623036|108623228 hsa-miR-1294 0 0 1
chr12:108623036|108623228 hsa-miR-1255a 0 0 1
chr12:108623036|108623228 hsa-miR-1321 0 1 1
chr12:108623036|108623228 hsa-miR-296-5p 1 1 1
chr12:108623036|108623228 hsa-miR-615-5p 0 0 1
chr12:108623036|108623228 hsa-miR-193a-5p 0 1 1
chr12:108623036|108623228 hsa-miR-1255b 0 0 1
chr12:108623036|108623228 hsa-miR-612 1 0 0
chr12:108623036|108623228 hsa-miR-661 0 1 0
chr12:108623036|108623228 hsa-miR-940 1 0 0
chr12:108623036|108623228 hsa-miR-1182 1 0 0
chr12:108623036|108623228 hsa-miR-1538 1 1 0
chr12:108623036|108623228 hsa-miR-3125 0 1 0
chr12:108623036|108623228 hsa-miR-3138 1 0 0
chr12:108623036|108623228 hsa-miR-3170 1 0 0
chr12:108623036|108623228 hsa-miR-3195 1 0 0
chr12:108623036|108623228 hsa-miR-4313 1 0 0
chr12:108623036|108623228 hsa-miR-4292 0 1 0
chr12:108623036|108623228 hsa-miR-378g 0 1 0
chr12:108623036|108623228 hsa-miR-4674 0 1 0
chr12:108623036|108623228 hsa-miR-4739 0 1 0
chr12:108623036|108623228 hsa-miR-6069 1 0 0
chr12:108623036|108623228 hsa-miR-6133 0 1 0
chr12:108623036|108623228 hsa-miR-6860 1 0 0
chr12:108623036|108623228 hsa-miR-9986 0 1 0
chr12:108623036|108623228 hsa-miR-6749-3p 0 1 0
chr12:108623036|108623228 hsa-miR-4747-3p 1 1 0
chr12:108623036|108623228 hsa-miR-4687-3p 1 0 0
chr12:108623036|108623228 hsa-miR-766-5p 0 1 0
chr12:108623036|108623228 hsa-miR-3926 0 1 0
chr12:108623036|108623228 hsa-miR-6757-5p 0 1 0
chr12:108623036|108623228 hsa-miR-197-5p 1 0 0
chr12:108623036|108623228 hsa-miR-939-3p 0 1 0
chr12:108623036|108623228 hsa-miR-193b-5p 1 0 0
chr12:108623036|108623228 hsa-miR-6803-3p 0 1 0
chr12:108623036|108623228 hsa-miR-664b-5p 0 1 0
chr12:108623036|108623228 hsa-miR-6870-3p 0 1 0
chr12:108623036|108623228 hsa-miR-6826-5p 0 1 0
chr12:108623036|108623228 hsa-miR-4742-5p 0 1 0
chr12:108623036|108623228 hsa-miR-4749-3p 1 1 0
chr12:108623036|108623228 hsa-miR-6802-3p 0 1 0
chr12:108623036|108623228 hsa-miR-5195-5p 0 1 0
chr12:108623036|108623228 hsa-miR-6729-3p 0 1 0
chr12:108623036|108623228 hsa-miR-6812-5p 1 0 0
chr12:108623036|108623228 hsa-miR-6865-5p 0 1 0
chr12:108623036|108623228 hsa-miR-6774-5p 1 0 0
chr12:108623036|108623228 hsa-miR-3620-5p 1 0 0
chr12:108623036|108623228 hsa-miR-6836-5p 1 0 0
chr12:108623036|108623228 hsa-miR-6831-5p 1 0 0
chr12:108623036|108623228 hsa-miR-6791-5p 0 1 0
chr12:108623036|108623228 hsa-miR-6784-3p 0 1 0
chr12:108623036|108623228 hsa-miR-6862-3p 0 1 0
chr12:108623036|108623228 hsa-miR-6884-5p 0 1 0
chr12:108623036|108623228 hsa-miR-655-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:108623036|108623228
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MVCISSLLPDGGEGPSATANGGLSKAKSPGLTPEPREDREGDDLTLHSFLP
Nucleotide Sequence ATGGTCTGCATCTCATCCCTGTTGCCTGATGGGGGTGAGGGGCCCTCTGCCACAGCCAATGGGGGCCTGTCCAAGGCCAAGAGCCCGGGCCTGACGCCAGAGCCCAGGGAGGACCGTGAGGGGGATGACCTCACCCTGCACAGCTTCCTCCCTTAG

CircID chr12:108623036|108623228
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MCRVRSSPSRSSLGSGVRPGLLALDRPPLAVAEGPSPPSGNRDEMQTIS
Nucleotide Sequence CTGTGCAGGGTGAGGTCATCCCCCTCACGGTCCTCCCTGGGCTCTGGCGTCAGGCCCGGGCTCTTGGCCTTGGACAGGCCCCCATTGGCTGTGGCAGAGGGCCCCTCACCCCCATCAGGCAACAGGGATGAGATGCAGACCATCTCG

CircID chr12:108623036|108623228
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MASGPGSWPWTGPHWLWQRAPHPHQATGMRCRPS
Nucleotide Sequence CTGGCGTCAGGCCCGGGCTCTTGGCCTTGGACAGGCCCCCATTGGCTGTGGCAGAGGGCCCCTCACCCCCATCAGGCAACAGGGATGAGATGCAGACCATCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites