CircNet

General Information

circRNA Basic Information

CircID	chr12:109242437\|109246448
Strand	+
CircType	exon
Host Gene	ENSG00000076555.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCTCTCTTTAAACTGTGGGGCTCCCCAGACAAGTATCCCAAAGACATCCTGACATACACTGAATTAGTGTTGGACTCTCAGGGCCAGCTGGTGGAGATGAACCGACTTCCTGGTGGAAATGAGGTGGGCATGGTGGCCTTCAAAATGAGGTTTAAGACCCAGGAGTACCCGGAAGGACGGGATGTGATCGTCATCGGCAATGACATCACCTTTCGCATTGGATCCTTTGGCCCTGGAGAGGACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTATTGGCATGGCAGAGGAGATCAAACACATGTTCCACGTGGCTTGGGTGGACCCAGAAGACCCCCACAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:109242437\|109246448	hsa-miR-15a-3p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:109242437\|109246448
ORF Type	ORF1
Protein Length	99
Nucleotide Length	297
Protein Sequence	MNRLPGGNEVGMVAFKMRFKTQEYPEGRDVIVIGNDITFRIGSFGPGEDLLYLRASEMARAEGIPKIYVAANSGARIGMAEEIKHMFHVAWVDPEDPHK
Nucleotide Sequence	ATGAACCGACTTCCTGGTGGAAATGAGGTGGGCATGGTGGCCTTCAAAATGAGGTTTAAGACCCAGGAGTACCCGGAAGGACGGGATGTGATCGTCATCGGCAATGACATCACCTTTCGCATTGGATCCTTTGGCCCTGGAGAGGACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTATTGGCATGGCAGAGGAGATCAAACACATGTTCCACGTGGCTTGGGTGGACCCAGAAGACCCCCACAAA

CircID	chr12:109242437\|109246448
ORF Type	ORF2
Protein Length	70
Nucleotide Length	210
Protein Sequence	MPSARAISDARRYRRSSPGPKDPMRKVMSLPMTITSRPSGYSWVLNLILKATMPTSFPPGSRFISTSWP*
Nucleotide Sequence	ATGCCCTCTGCCCGGGCCATCTCGGATGCCCGCAGGTACAGAAGGTCCTCTCCAGGGCCAAAGGATCCAATGCGAAAGGTGATGTCATTGCCGATGACGATCACATCCCGTCCTTCCGGGTACTCCTGGGTCTTAAACCTCATTTTGAAGGCCACCATGCCCACCTCATTTCCACCAGGAAGTCGGTTCATCTCCACCAGCTGGCCCTGA

CircID	chr12:109242437\|109246448
ORF Type	ORF3
Protein Length	64
Nucleotide Length	192
Protein Sequence	MTSPFALDPLALERTFCTCGHPRWPGQRAFPKFTWQPTVAPVLAWQRRSNTCSTWLGWTQKTPT
Nucleotide Sequence	ATGACATCACCTTTCGCATTGGATCCTTTGGCCCTGGAGAGGACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTATTGGCATGGCAGAGGAGATCAAACACATGTTCCACGTGGCTTGGGTGGACCCAGAAGACCCCCACA

CircID	chr12:109242437\|109246448
ORF Type	ORF4
Protein Length	109
Nucleotide Length	327
Protein Sequence	VGVFWVHPSHVEHVFDLLCHANTGATVGCHVNFGNALCPGHLGCPQVQKVLSRAKGSNAKGDVIADDDHIPSFRVLLGLKPHFEGHHAHLISTRKSVHLHQLALRVQH*
Nucleotide Sequence	GTGGGGGTCTTCTGGGTCCACCCAAGCCACGTGGAACATGTGTTTGATCTCCTCTGCCATGCCAATACGGGCGCCACTGTTGGCTGCCACGTAAATTTTGGGAATGCCCTCTGCCCGGGCCATCTCGGATGCCCGCAGGTACAGAAGGTCCTCTCCAGGGCCAAAGGATCCAATGCGAAAGGTGATGTCATTGCCGATGACGATCACATCCCGTCCTTCCGGGTACTCCTGGGTCTTAAACCTCATTTTGAAGGCCACCATGCCCACCTCATTTCCACCAGGAAGTCGGTTCATCTCCACCAGCTGGCCCTGAGAGTCCAACACTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:109242437\|109246448	DGCR8	1	0	0
chr12:109242437\|109246448	ACIN1	0	1	0
chr12:109242437\|109246448	FBL	2	1	1
chr12:109242437\|109246448	SRSF1	0	0	4
chr12:109242437\|109246448	ELAVL1	0	0	1
chr12:109242437\|109246448	PRPF8	0	1	0
chr12:109242437\|109246448	SRSF9	0	1	2
chr12:109242437\|109246448	HNRNPA1	0	6	0
chr12:109242437\|109246448	U2AF2	6	2	1
chr12:109242437\|109246448	CSTF2T	0	0	1
chr12:109242437\|109246448	LIN28B	0	0	1
chr12:109242437\|109246448	RBFOX2	5	1	0
chr12:109242437\|109246448	FUS	3	0	0
chr12:109242437\|109246448	FXR1	0	0	2
chr12:109242437\|109246448	RBM10	2	0	0
chr12:109242437\|109246448	FMR1	0	0	1
chr12:109242437\|109246448	BUD13	0	0	1
chr12:109242437\|109246448	TARDBP	0	0	1
chr12:109242437\|109246448	AGO2	0	1	0
chr12:109242437\|109246448	EIF4A3	2	1	5
chr12:109242437\|109246448	NOP58	2	0	1

CircRNA Information