CircRNA Information

General Information
circRNA Basic Information
CircID chr12:109450428|109450563
Strand +
CircType exon
Host Gene ENSG00000110906.11;
Algorism CIRI2;
Sequence CAGCCCCAGGGAGCTTCCCTGCTATAAACACAGACCCCCTTGTCTTTGCCTCTGATTTTTACACAGTGTAGAGTGGCCAGCAGTGAACAGGTTGAGGATGTGCGGGTAGATAGATAACTTTGGGTCTGGTTTGTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:109450428|109450563
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MSLPLIFTQCRVASSEQVEDVRVDR
Nucleotide Sequence TTGTCTTTGCCTCTGATTTTTACACAGTGTAGAGTGGCCAGCAGTGAACAGGTTGAGGATGTGCGGGTAGATAGATAA

CircID chr12:109450428|109450563
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MLATLHCVKIRGKDKGVCVYSREAPWG
Nucleotide Sequence CTGCTGGCCACTCTACACTGTGTAAAAATCAGAGGCAAAGACAAGGGGGTCTGTGTTTATAGCAGGGAAGCTCCCTGGGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites