CircNet

General Information

circRNA Basic Information

CircID	chr12:110346220\|110346339
Strand	-
CircType	exon
Host Gene	ENSG00000174437.15;
Algorism	CIRI2;
Sequence	CGCTGAACGTGACCCAGTGGCTGATGGTGCTGAAAATCTCCTTGCCCGTGATTCTCATGGATGAGACGCTCAAGTTTGTGGCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:110346220\|110346339	hsa-miR-29a-5p	0	0	1
chr12:110346220\|110346339	hsa-miR-29a-3p	0	0	1
chr12:110346220\|110346339	hsa-miR-29c-5p	0	0	1
chr12:110346220\|110346339	hsa-miR-29c-3p	0	0	1
chr12:110346220\|110346339	hsa-miR-196b-5p	0	0	1
chr12:110346220\|110346339	hsa-miR-196b-3p	0	0	1
chr12:110346220\|110346339	hsa-miR-580-5p	0	0	1
chr12:110346220\|110346339	hsa-miR-580-3p	0	0	1
chr12:110346220\|110346339	hsa-miR-603	0	0	1
chr12:110346220\|110346339	hsa-miR-767-5p	0	0	1
chr12:110346220\|110346339	hsa-miR-196a	0	0	1
chr12:110346220\|110346339	hsa-miR-29b	0	0	1
chr12:110346220\|110346339	hsa-miR-923	0	0	1
chr12:110346220\|110346339	hsa-miR-602	1	0	0
chr12:110346220\|110346339	hsa-miR-4252	0	1	0
chr12:110346220\|110346339	hsa-miR-4466	1	0	0
chr12:110346220\|110346339	hsa-miR-4734	1	0	0
chr12:110346220\|110346339	hsa-miR-3157-5p	0	1	0
chr12:110346220\|110346339	hsa-miR-4726-3p	1	0	0
chr12:110346220\|110346339	hsa-miR-181c-3p	0	1	0
chr12:110346220\|110346339	hsa-miR-6888-5p	0	1	0
chr12:110346220\|110346339	hsa-miR-4640-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-3065-3p	0	1	0
chr12:110346220\|110346339	hsa-miR-7112-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-654-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-2277-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-196a-5p	0	1	0
chr12:110346220\|110346339	hsa-miR-1207-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-6808-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-7111-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-4649-5p	1	0	0
chr12:110346220\|110346339	hsa-miR-6729-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:110346220\|110346339
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	LNVTQWLMVLKISLPVILMDETLKFVARNYLEPGKECVQ
Nucleotide Sequence	CTGAACGTGACCCAGTGGCTGATGGTGCTGAAAATCTCCTTGCCCGTGATTCTCATGGATGAGACGCTCAAGTTTGTGGCCCGCAACTACCTGGAACCTGGTAAAGAGTGTGTGCAG

CircID	chr12:110346220\|110346339
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	LHTLFTRFQVVAGHKLERLIHENHGQGDFQHHQPLGHVQ
Nucleotide Sequence	CTGCACACACTCTTTACCAGGTTCCAGGTAGTTGCGGGCCACAAACTTGAGCGTCTCATCCATGAGAATCACGGGCAAGGAGATTTTCAGCACCATCAGCCACTGGGTCACGTTCAG

CircID	chr12:110346220\|110346339
ORF Type	ORF3
Protein Length	29
Nucleotide Length	87
Protein Sequence	MRATNLSVSSMRITGKEIFSTISHWVTFS
Nucleotide Sequence	TTGCGGGCCACAAACTTGAGCGTCTCATCCATGAGAATCACGGGCAAGGAGATTTTCAGCACCATCAGCCACTGGGTCACGTTCAGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information