CircNet

General Information

circRNA Basic Information

CircID	chr12:110349449\|110349569
Strand	-
CircType	exon
Host Gene	ENSG00000174437.15;
Algorism	CIRI2;
Sequence	CAACAATCATACATACCCTAACTGGGACACCACTCTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:110349449\|110349569	hsa-miR-661	-11	1	1
chr12:110349449\|110349569	hsa-miR-874-5p	0	0	1
chr12:110349449\|110349569	hsa-miR-874-3p	0	0	1
chr12:110349449\|110349569	hsa-miR-920	-4	0	1
chr12:110349449\|110349569	hsa-miR-1205	-6	0	1
chr12:110349449\|110349569	hsa-miR-146b-3p	0	0	1
chr12:110349449\|110349569	hsa-miR-1184	-4	0	1
chr12:110349449\|110349569	hsa-miR-508-3p	0	0	1
chr12:110349449\|110349569	hsa-miR-516a-3p	-2	1	1
chr12:110349449\|110349569	hsa-miR-544	0	0	1
chr12:110349449\|110349569	hsa-miR-1254	0	0	1
chr12:110349449\|110349569	hsa-miR-219-5p	0	0	1
chr12:110349449\|110349569	hsa-miR-637	-15	1	0
chr12:110349449\|110349569	hsa-miR-3657	-10	1	0
chr12:110349449\|110349569	hsa-miR-4475	-3	1	0
chr12:110349449\|110349569	hsa-miR-4663	-10	1	0
chr12:110349449\|110349569	hsa-miR-1304-3p	-3	1	0
chr12:110349449\|110349569	hsa-miR-3158-5p	-13	1	0
chr12:110349449\|110349569	hsa-miR-3678-3p	-6	1	0
chr12:110349449\|110349569	hsa-miR-3681-5p	-9	1	0
chr12:110349449\|110349569	hsa-miR-3670	-11	1	0
chr12:110349449\|110349569	hsa-miR-3173-5p	-8	1	0
chr12:110349449\|110349569	hsa-miR-4691-5p	-6	1	0
chr12:110349449\|110349569	hsa-miR-516b-3p	-2	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:110349449\|110349569
ORF Type	ORF1
Protein Length	29
Nucleotide Length	87
Protein Sequence	MQNADDPFWRKLSLELSELPGKQGIWPTS
Nucleotide Sequence	CTGCAGAATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTTCC

CircID	chr12:110349449\|110349569
ORF Type	ORF2
Protein Length	26
Nucleotide Length	78
Protein Sequence	MQMIHSGGSCPLSSVSSQASRASGRL
Nucleotide Sequence	ATGCAGATGATCCATTCTGGAGGAAGCTGTCCCTTGAGCTCAGTGAGCTCCCAGGCAAGCAGGGCATCTGGCCGACTT

CircID	chr12:110349449\|110349569
ORF Type	ORF3
Protein Length	34
Nucleotide Length	102
Protein Sequence	MLAWELTELKGQLPPEWIICILQSGVPVRVCMIV
Nucleotide Sequence	CTGCTTGCCTGGGAGCTCACTGAGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGTCCCAGTTAGGGTATGTATGATTGTT

CircID	chr12:110349449\|110349569
ORF Type	ORF4
Protein Length	33
Nucleotide Length	102
Protein Sequence	MPCLPGSSLSSRDSFLQNGSSAFCRVVSQLGYV
Nucleotide Sequence	ATGCCCTGCTTGCCTGGGAGCTCACTGAGCTCAAGGGACAGCTTCCTCCAGAATGGATCATCTGCATTCTGCAGAGTGGTGTCCCAGTTAGGGTATGTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information