CircNet

General Information

circRNA Basic Information

CircID	chr12:110382843\|110388623
Strand	-
CircType	exon
Host Gene	ENSG00000196510.12;
Algorism	CIRI2;find_circ;CIRC
Sequence	ATAAACATGATGCTGGCAAACCTGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAGGTGCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGAATGGATGTATATGGCTACCTACTGGCACGAGAAGGGCGGCTAGAGGATGTTGAGAACCTTGGATGCCGCCTTTTCAATATCTCTGATCAGCATGCAGAACCGTGGGTGGTTTCTGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:110382843\|110388623	hsa-miR-149-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:110382843\|110388623
ORF Type	ORF1
Protein Length	105
Nucleotide Length	315
Protein Sequence	MMLANLYKKAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWIKAYAFVHTGDNSRAISTIWNGCIWLPTGTRRAARGC*
Nucleotide Sequence	ATGATGCTGGCAAACCTGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAGGTGCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGAATGGATGTATATGGCTACCTACTGGCACGAGAAGGGCGGCTAGAGGATGTTGA

CircID	chr12:110382843\|110388623
ORF Type	ORF2
Protein Length	67
Nucleotide Length	201
Protein Sequence	MVLIALELSPVCTKAYALIHTESQSKLGTVWITFIVMDATSAPFTERDNKPRMASRANGHCLSTSL*
Nucleotide Sequence	ATGGTACTGATTGCTCTTGAGTTGTCACCAGTGTGCACAAAAGCATACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATCACATTCATTGTCATGGATGCCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCACCTCCTTATAG

CircID	chr12:110382843\|110388623
ORF Type	ORF3
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLLCTLVTTQEQSVPSGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVS
Nucleotide Sequence	ATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGAATGGATGTATATGGCTACCTACTGGCACGAGAAGGGCGGCTAGAGGATGTTGAGAACCTTGGATGCCGCCTTTTCAATATCTCTGATCAGCATGCAGAACCGTGGGTGGTTTCT

CircID	chr12:110382843\|110388623
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MPPLPLLQKGTTSLEWHQGLMGTASAPPYSW*
Nucleotide Sequence	ATGCCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCACCTCCTTATAGCTGGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:110382843\|110388623	NOP56	0	1	0
chr12:110382843\|110388623	MOV10	0	2	2
chr12:110382843\|110388623	ELAVL1	7	12	3
chr12:110382843\|110388623	SF3B4	1	0	1
chr12:110382843\|110388623	CELF2	0	0	2
chr12:110382843\|110388623	PRPF8	0	3	3
chr12:110382843\|110388623	UPF1	0	5	0
chr12:110382843\|110388623	TNRC6A	0	0	1
chr12:110382843\|110388623	FMR1	0	6	6
chr12:110382843\|110388623	TROVE2	0	2	0
chr12:110382843\|110388623	FUS	1	1	0
chr12:110382843\|110388623	DGCR8	0	0	1
chr12:110382843\|110388623	SRSF1	0	0	9
chr12:110382843\|110388623	NOP58	4	1	2
chr12:110382843\|110388623	U2AF1	0	2	1
chr12:110382843\|110388623	U2AF2	2	10	8
chr12:110382843\|110388623	SRSF9	0	0	5
chr12:110382843\|110388623	TIAL1	0	1	0
chr12:110382843\|110388623	DDX54	0	6	13
chr12:110382843\|110388623	RBM10	0	3	0
chr12:110382843\|110388623	HNRNPM	0	0	1
chr12:110382843\|110388623	PTBP1	2	0	0
chr12:110382843\|110388623	HNRNPC	1	1	0
chr12:110382843\|110388623	TRA2A	0	1	2
chr12:110382843\|110388623	HNRNPA2B1	1	0	0
chr12:110382843\|110388623	DHX9	2	3	0
chr12:110382843\|110388623	HNRNPA1	4	0	0
chr12:110382843\|110388623	ZC3H7B	1	1	2
chr12:110382843\|110388623	SMNDC1	0	1	2
chr12:110382843\|110388623	MSI2	0	1	0
chr12:110382843\|110388623	ACIN1	0	2	5
chr12:110382843\|110388623	FXR1	1	2	3
chr12:110382843\|110388623	FXR2	0	3	6
chr12:110382843\|110388623	SND1	0	0	2
chr12:110382843\|110388623	IGF2BP1	0	0	2
chr12:110382843\|110388623	IGF2BP3	0	1	0
chr12:110382843\|110388623	IGF2BP2	1	6	6
chr12:110382843\|110388623	MBNL2	0	2	0
chr12:110382843\|110388623	TARDBP	0	0	1
chr12:110382843\|110388623	BUD13	0	0	2
chr12:110382843\|110388623	EIF4G2	0	0	1
chr12:110382843\|110388623	CSTF2T	0	1	2
chr12:110382843\|110388623	TIA1	0	3	0
chr12:110382843\|110388623	RBM22	0	2	0
chr12:110382843\|110388623	XRN2	0	0	1
chr12:110382843\|110388623	FBL	0	4	2
chr12:110382843\|110388623	AGO1	0	1	0
chr12:110382843\|110388623	EIF4A3	2	6	6
chr12:110382843\|110388623	AGO2	0	1	6

CircRNA Information