CircNet

General Information

circRNA Basic Information

CircID	chr12:110435008\|110435168
Strand	-
CircType	exon
Host Gene	ENSG00000111229.14;
Algorism	CIRI2;
Sequence	CCAAATTCTTGATCAAGAGTTTTTCAAGTAAAGACATGCTCTTCTCTCTTCTGTATAAAACTTTACGAAATAAAGGCAAAAGATTGTGTACATCTTGCTGGAAAATGCTGCCCAGGGCTCTGGAGACGGTGGCTGCCCGGGCTCCCTTCACTGTCCAGGTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:110435008\|110435168	hsa-miR-107	0	1	1
chr12:110435008\|110435168	hsa-miR-511-5p	0	0	1
chr12:110435008\|110435168	hsa-miR-511-3p	0	0	1
chr12:110435008\|110435168	hsa-miR-561-5p	0	0	1
chr12:110435008\|110435168	hsa-miR-561-3p	0	0	1
chr12:110435008\|110435168	hsa-miR-612	0	1	1
chr12:110435008\|110435168	hsa-miR-619-5p	0	0	1
chr12:110435008\|110435168	hsa-miR-619-3p	0	0	1
chr12:110435008\|110435168	hsa-miR-631	0	0	1
chr12:110435008\|110435168	hsa-miR-766-5p	0	0	1
chr12:110435008\|110435168	hsa-miR-766-3p	0	0	1
chr12:110435008\|110435168	hsa-miR-1253	0	0	1
chr12:110435008\|110435168	hsa-miR-525-5p	0	0	1
chr12:110435008\|110435168	hsa-miR-338-3p	0	0	1
chr12:110435008\|110435168	hsa-miR-520a-5p	0	1	1
chr12:110435008\|110435168	hsa-miR-1233	0	0	1
chr12:110435008\|110435168	hsa-miR-103	0	0	1
chr12:110435008\|110435168	hsa-miR-1285	0	0	1
chr12:110435008\|110435168	hsa-miR-1826	0	0	1
chr12:110435008\|110435168	hsa-miR-1538	1	1	0
chr12:110435008\|110435168	hsa-miR-3138	1	0	0
chr12:110435008\|110435168	hsa-miR-4292	0	1	0
chr12:110435008\|110435168	hsa-miR-4739	1	0	0
chr12:110435008\|110435168	hsa-miR-4691-3p	0	1	0
chr12:110435008\|110435168	hsa-miR-30c-2-3p	1	0	0
chr12:110435008\|110435168	hsa-miR-6847-5p	1	1	0
chr12:110435008\|110435168	hsa-miR-3202	0	1	0
chr12:110435008\|110435168	hsa-miR-103a-3p	0	1	0
chr12:110435008\|110435168	hsa-miR-6864-5p	0	1	0
chr12:110435008\|110435168	hsa-miR-6836-5p	1	0	0
chr12:110435008\|110435168	hsa-miR-3187-5p	0	1	0
chr12:110435008\|110435168	hsa-miR-6856-5p	1	0	0
chr12:110435008\|110435168	hsa-miR-1285-3p	0	1	0
chr12:110435008\|110435168	hsa-miR-1185-1-3p	0	1	0
chr12:110435008\|110435168	hsa-miR-1185-2-3p	0	1	0
chr12:110435008\|110435168	hsa-let-7f-1-3p	1	1	0
chr12:110435008\|110435168	hsa-let-7a-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:110435008\|110435168
ORF Type	ORF1
Protein Length	51
Nucleotide Length	153
Protein Sequence	MIKSFSSKDMLFSLLYKTLRNKGKRLCTSCWKMLPRALETVAARAPFTVQV
Nucleotide Sequence	TTGATCAAGAGTTTTTCAAGTAAAGACATGCTCTTCTCTCTTCTGTATAAAACTTTACGAAATAAAGGCAAAAGATTGTGTACATCTTGCTGGAAAATGCTGCCCAGGGCTCTGGAGACGGTGGCTGCCCGGGCTCCCTTCACTGTCCAGGTC

CircID	chr12:110435008\|110435168
ORF Type	ORF2
Protein Length	31
Nucleotide Length	96
Protein Sequence	MDSEGSPGSHRLQSPGQHFPARCTQSFAFIS
Nucleotide Sequence	CTGGACAGTGAAGGGAGCCCGGGCAGCCACCGTCTCCAGAGCCCTGGGCAGCATTTTCCAGCAAGATGTACACAATCTTTTGCCTTTATTTCGTAA

CircID	chr12:110435008\|110435168
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MGSIFQQDVHNLLPLFRKVLYRREKSMSLLEKLLIKNL
Nucleotide Sequence	CTGGGCAGCATTTTCCAGCAAGATGTACACAATCTTTTGCCTTTATTTCGTAAAGTTTTATACAGAAGAGAGAAGAGCATGTCTTTACTTGAAAAACTCTTGATCAAGAATTTG

CircID	chr12:110435008\|110435168
ORF Type	ORF4
Protein Length	26
Nucleotide Length	81
Protein Sequence	MYTIFCLYFVKFYTEERRACLYLKNS
Nucleotide Sequence	ATGTACACAATCTTTTGCCTTTATTTCGTAAAGTTTTATACAGAAGAGAGAAGAGCATGTCTTTACTTGAAAAACTCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information