CircRNA Information

General Information
circRNA Basic Information
CircID chr12:111362074|111362234
Strand -
CircType exon
Host Gene ENSG00000198324.13;
Algorism CIRI2;
Sequence CCTTCCGGTCCTGCACTAACACCTGCACCTGTGTCCCCAGTCACTACCCTCCCAGCCACCGTCCTGCTCCTGGAGGCAGGCAGGCACAGAGCCAGGCCAGCTCCTCTGGCAGGTCCCGGAGCAAGGCCAGGCCCAGGTGTGGCTGCCATGACCGATCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:111362074|111362234 hsa-miR-130a-5p 0 0 1
chr12:111362074|111362234 hsa-miR-130a-3p 0 0 1
chr12:111362074|111362234 hsa-miR-134-5p 0 0 1
chr12:111362074|111362234 hsa-miR-134-3p 0 0 1
chr12:111362074|111362234 hsa-miR-149-5p 0 0 1
chr12:111362074|111362234 hsa-miR-149-3p 0 0 1
chr12:111362074|111362234 hsa-miR-301a-5p 0 0 1
chr12:111362074|111362234 hsa-miR-301a-3p 0 0 1
chr12:111362074|111362234 hsa-miR-130b-5p 0 0 1
chr12:111362074|111362234 hsa-miR-130b-3p 0 0 1
chr12:111362074|111362234 hsa-miR-492 0 1 1
chr12:111362074|111362234 hsa-miR-552-5p 0 0 1
chr12:111362074|111362234 hsa-miR-552-3p 0 0 1
chr12:111362074|111362234 hsa-miR-657 0 0 1
chr12:111362074|111362234 hsa-miR-454-5p 0 0 1
chr12:111362074|111362234 hsa-miR-454-3p 0 0 1
chr12:111362074|111362234 hsa-miR-708-5p 0 0 1
chr12:111362074|111362234 hsa-miR-708-3p 0 0 1
chr12:111362074|111362234 hsa-miR-665 0 0 1
chr12:111362074|111362234 hsa-miR-760 1 1 1
chr12:111362074|111362234 hsa-miR-301b-5p 0 0 1
chr12:111362074|111362234 hsa-miR-301b-3p 0 0 1
chr12:111362074|111362234 hsa-miR-1228-5p 0 0 1
chr12:111362074|111362234 hsa-miR-1228-3p 0 0 1
chr12:111362074|111362234 hsa-miR-1286 0 0 1
chr12:111362074|111362234 hsa-miR-885-3p 0 0 1
chr12:111362074|111362234 hsa-miR-28-5p 0 0 1
chr12:111362074|111362234 hsa-miR-550 0 0 1
chr12:111362074|111362234 hsa-miR-184 1 0 0
chr12:111362074|111362234 hsa-miR-608 1 0 0
chr12:111362074|111362234 hsa-miR-612 1 0 0
chr12:111362074|111362234 hsa-miR-637 1 0 0
chr12:111362074|111362234 hsa-miR-661 1 1 0
chr12:111362074|111362234 hsa-miR-762 1 0 0
chr12:111362074|111362234 hsa-miR-921 1 0 0
chr12:111362074|111362234 hsa-miR-1293 1 0 0
chr12:111362074|111362234 hsa-miR-2861 1 1 0
chr12:111362074|111362234 hsa-miR-3132 1 0 0
chr12:111362074|111362234 hsa-miR-3141 1 0 0
chr12:111362074|111362234 hsa-miR-1193 1 0 0
chr12:111362074|111362234 hsa-miR-3176 0 1 0
chr12:111362074|111362234 hsa-miR-4292 1 1 0
chr12:111362074|111362234 hsa-miR-3621 1 0 0
chr12:111362074|111362234 hsa-miR-3652 1 0 0
chr12:111362074|111362234 hsa-miR-3665 1 0 0
chr12:111362074|111362234 hsa-miR-4449 1 0 0
chr12:111362074|111362234 hsa-miR-4463 1 0 0
chr12:111362074|111362234 hsa-miR-4466 1 0 0
chr12:111362074|111362234 hsa-miR-3689c 0 1 0
chr12:111362074|111362234 hsa-miR-4489 1 0 0
chr12:111362074|111362234 hsa-miR-4497 0 1 0
chr12:111362074|111362234 hsa-miR-4498 0 1 0
chr12:111362074|111362234 hsa-miR-4505 1 0 0
chr12:111362074|111362234 hsa-miR-2392 1 0 0
chr12:111362074|111362234 hsa-miR-3960 1 0 0
chr12:111362074|111362234 hsa-miR-4647 1 0 0
chr12:111362074|111362234 hsa-miR-4688 1 0 0
chr12:111362074|111362234 hsa-miR-4706 1 0 0
chr12:111362074|111362234 hsa-miR-5090 1 0 0
chr12:111362074|111362234 hsa-miR-5698 1 0 0
chr12:111362074|111362234 hsa-miR-5787 1 1 0
chr12:111362074|111362234 hsa-miR-6081 1 0 0
chr12:111362074|111362234 hsa-miR-6085 1 0 0
chr12:111362074|111362234 hsa-miR-6086 1 0 0
chr12:111362074|111362234 hsa-miR-6132 1 0 0
chr12:111362074|111362234 hsa-miR-6165 1 1 0
chr12:111362074|111362234 hsa-miR-8057 0 1 0
chr12:111362074|111362234 hsa-miR-8089 1 1 0
chr12:111362074|111362234 hsa-miR-138-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4731-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6747-3p 0 1 0
chr12:111362074|111362234 hsa-miR-4433a-3p 1 0 0
chr12:111362074|111362234 hsa-miR-7106-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6894-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6857-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6799-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6728-5p 1 0 0
chr12:111362074|111362234 hsa-miR-1236-5p 0 1 0
chr12:111362074|111362234 hsa-miR-6515-5p 1 0 0
chr12:111362074|111362234 hsa-miR-3192-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6746-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4722-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4474-3p 1 0 0
chr12:111362074|111362234 hsa-miR-197-5p 1 0 0
chr12:111362074|111362234 hsa-miR-8069 1 0 0
chr12:111362074|111362234 hsa-miR-7845-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6748-5p 1 0 0
chr12:111362074|111362234 hsa-miR-185-3p 1 1 0
chr12:111362074|111362234 hsa-miR-6798-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6765-3p 0 1 0
chr12:111362074|111362234 hsa-miR-6810-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6786-5p 1 0 0
chr12:111362074|111362234 hsa-miR-939-3p 1 1 0
chr12:111362074|111362234 hsa-miR-1226-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4763-5p 0 1 0
chr12:111362074|111362234 hsa-miR-6894-3p 0 1 0
chr12:111362074|111362234 hsa-miR-4640-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4691-3p 0 1 0
chr12:111362074|111362234 hsa-miR-1908-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6771-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4690-5p 1 0 0
chr12:111362074|111362234 hsa-miR-92b-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6749-5p 1 0 0
chr12:111362074|111362234 hsa-miR-7156-3p 1 0 0
chr12:111362074|111362234 hsa-miR-6889-3p 0 1 0
chr12:111362074|111362234 hsa-miR-6755-5p 0 1 0
chr12:111362074|111362234 hsa-miR-449b-3p 0 1 0
chr12:111362074|111362234 hsa-miR-3152-3p 0 1 0
chr12:111362074|111362234 hsa-miR-10400-5p 1 0 0
chr12:111362074|111362234 hsa-miR-1207-5p 1 0 0
chr12:111362074|111362234 hsa-miR-1233-5p 1 0 0
chr12:111362074|111362234 hsa-miR-3689b-3p 0 1 0
chr12:111362074|111362234 hsa-miR-4763-3p 1 0 0
chr12:111362074|111362234 hsa-miR-6769b-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6778-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6893-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6743-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6752-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6754-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6756-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6803-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6813-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6851-5p 1 0 0
chr12:111362074|111362234 hsa-miR-7107-5p 1 0 0
chr12:111362074|111362234 hsa-miR-7110-5p 1 0 0
chr12:111362074|111362234 hsa-miR-1249-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6722-3p 1 0 0
chr12:111362074|111362234 hsa-miR-6774-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6779-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6780a-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6797-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6879-5p 1 0 0
chr12:111362074|111362234 hsa-miR-3620-5p 1 0 0
chr12:111362074|111362234 hsa-miR-4728-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6836-5p 1 0 0
chr12:111362074|111362234 hsa-miR-328-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6738-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6795-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6846-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6848-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6883-5p 1 1 0
chr12:111362074|111362234 hsa-miR-6887-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6885-5p 1 0 0
chr12:111362074|111362234 hsa-miR-939-5p 1 1 0
chr12:111362074|111362234 hsa-miR-4758-5p 1 0 0
chr12:111362074|111362234 hsa-miR-365b-5p 1 1 0
chr12:111362074|111362234 hsa-miR-1271-3p 0 1 0
chr12:111362074|111362234 hsa-miR-4700-5p 1 1 0
chr12:111362074|111362234 hsa-miR-4646-5p 1 0 0
chr12:111362074|111362234 hsa-miR-6785-5p 1 1 0
chr12:111362074|111362234 hsa-miR-4667-5p 0 1 0
chr12:111362074|111362234 hsa-miR-6529-3p 0 1 0
chr12:111362074|111362234 hsa-miR-3922-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr12:111362074|111362234
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MLLEAGRHRARPAPLAGPGARPGPGVAAMTDP
Nucleotide Sequence CTGCTCCTGGAGGCAGGCAGGCACAGAGCCAGGCCAGCTCCTCTGGCAGGTCCCGGAGCAAGGCCAGGCCCAGGTGTGGCTGCCATGACCGATCCT
CircID chr12:111362074|111362234
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MHLCPQSLPSQPPSCSWRQAGTEPGQLLWQVPEQGQAQVWLP
Nucleotide Sequence CTGCACCTGTGTCCCCAGTCACTACCCTCCCAGCCACCGTCCTGCTCCTGGAGGCAGGCAGGCACAGAGCCAGGCCAGCTCCTCTGGCAGGTCCCGGAGCAAGGCCAGGCCCAGGTGTGGCTGCCATGA
CircID chr12:111362074|111362234
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MAATPGPGLAPGPARGAGLALCLPASRSRTVAGRVVTGDTGAGVSAGPE
Nucleotide Sequence ATGGCAGCCACACCTGGGCCTGGCCTTGCTCCGGGACCTGCCAGAGGAGCTGGCCTGGCTCTGTGCCTGCCTGCCTCCAGGAGCAGGACGGTGGCTGGGAGGGTAGTGACTGGGGACACAGGTGCAGGTGTTAGTGCAGGACCGGAA
CircID chr12:111362074|111362234
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MGLALLRDLPEELAWLCACLPPGAGRWLGG
Nucleotide Sequence CTGGGCCTGGCCTTGCTCCGGGACCTGCCAGAGGAGCTGGCCTGGCTCTGTGCCTGCCTGCCTCCAGGAGCAGGACGGTGGCTGGGAGGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab